Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028194 Vanilla planifolia HOM05D004444 ORTHO05D005246 1.9e-49 198.7 95 100.0
PSO063G7312 Papaver somniferum HOM05D004444 ORTHO05D005246 5.9e-14 80.9 54 68.5
PSO782G3237 Papaver somniferum HOM05D004444 ORTHO05D005246 5.9e-14 80.9 54 68.5
MBI04_g37105_MAGBIO Magnolia biondii HOM05D004444 ORTHO05D005246 1.3e-13 79.7 54 68.5
TAR374G0400 Trochodendron aralioides HOM05D004444 ORTHO05D005246 1.7e-13 79.3 54 68.5
Zm00001eb427640 Zea mays HOM05D004444 ORTHO05D005246 6.5e-13 77.4 54 66.7
Os10g0516800 Oryza sativa ssp. japonica HOM05D004444 ORTHO05D005246 8.6e-13 77.0 56 64.3
GSVIVG01002027001 Vitis vinifera HOM05D004444 ORTHO05D005246 1.5e-12 76.3 54 68.5
Aqoxy5G04401 Aquilegia oxysepala HOM05D004444 ORTHO05D005246 1.9e-12 75.9 54 64.8
Zm00001eb043540 Zea mays HOM05D004444 ORTHO05D005246 2.5e-12 75.5 56 62.5
ATR0810G148 Amborella trichopoda HOM05D004444 ORTHO05D005246 3.2e-12 75.1 54 66.7
ECA248G3474 Erigeron canadensis HOM05D004444 ORTHO05D005246 3.2e-12 75.1 49 71.4
Potri.010G255600 Populus trichocarpa HOM05D004444 ORTHO05D005246 3.2e-12 75.1 48 72.9
Sabra10G0199000 Salix brachista HOM05D004444 ORTHO05D005246 3.2e-12 75.1 48 72.9
MBI12_g01745_MAGBIO Magnolia biondii HOM05D004444 ORTHO05D005246 4.2e-12 74.7 47 72.3
MSTRG.5072 Avicennia marina HOM05D004444 ORTHO05D005246 5.5e-12 74.3 48 68.8
HanXRQChr01g0023401 Helianthus annuus HOM05D004444 ORTHO05D005246 5.5e-12 74.3 49 71.4
QL01p000088 Quercus lobata HOM05D004444 ORTHO05D005246 5.5e-12 74.3 50 72.0
SGA_v2.0_scaffold232G43497 Striga asiatica HOM05D004444 ORTHO05D005246 7.2e-12 73.9 48 70.8
vmacro18720 Vaccinium macrocarpon HOM05D004444 ORTHO05D005246 7.2e-12 73.9 49 67.3
Migut.N01853 Erythranthe guttata HOM05D004444 ORTHO05D005246 9.5e-12 73.6 48 68.8
Potri.008G002100 Populus trichocarpa HOM05D004444 ORTHO05D005246 9.5e-12 73.6 48 70.8
Thecc.02G151100 Theobroma cacao HOM05D004444 ORTHO05D005246 9.5e-12 73.6 48 72.9
Eucgr.J00322 Eucalyptus grandis HOM05D004444 ORTHO05D005246 1.2e-11 73.2 45 73.3
Cpa.g.sc248.6 Carica papaya HOM05D004444 ORTHO05D005246 1.6e-11 72.8 54 66.7
Duzib248G0301 Durio zibethinus HOM05D004444 ORTHO05D005246 1.6e-11 72.8 48 70.8
SalBow6G5617 Salvia bowleyana HOM05D004444 ORTHO05D005246 1.6e-11 72.8 51 64.7
VMungo0464G0300 Vigna mungo HOM05D004444 ORTHO05D005246 1.6e-11 72.8 48 70.8
Atru.chr11.7 Acer truncatum HOM05D004444 ORTHO05D005246 2.1e-11 72.4 48 70.8
Ca_04130_v3 Cicer arietinum L. HOM05D004444 ORTHO05D005246 2.1e-11 72.4 48 70.8
Duzib132G0849 Durio zibethinus HOM05D004444 ORTHO05D005246 2.1e-11 72.4 48 70.8
Lj2g0009416 Lotus japonicus HOM05D004444 ORTHO05D005246 2.1e-11 72.4 48 68.8
RcHm_v2.0_Chr4g0447291 Rosa chinensis HOM05D004444 ORTHO05D005246 2.1e-11 72.4 49 73.5
Sc19g0000340 Simmondsia chinensis HOM05D004444 ORTHO05D005246 2.1e-11 72.4 54 61.1
Ciclev10014323m.g Citrus clementina HOM05D004444 ORTHO05D005246 2.8e-11 72.0 48 72.9
Gohir.A04G110200 Gossypium hirsutum HOM05D004444 ORTHO05D005246 2.8e-11 72.0 48 70.8
Gorai.012G137000 Gossypium raimondii HOM05D004444 ORTHO05D005246 2.8e-11 72.0 48 70.8
Os04g0541500 Oryza sativa ssp. japonica HOM05D004444 ORTHO05D005246 2.8e-11 72.0 52 65.4
SGA_v2.0_scaffold43G16290 Striga asiatica HOM05D004444 ORTHO05D005246 2.8e-11 72.0 43 74.4
HanXRQChr11g0343011 Helianthus annuus HOM05D004444 ORTHO05D005246 3.6e-11 71.6 49 67.3
Manes.11G000400 Manihot esculenta HOM05D004444 ORTHO05D005246 3.6e-11 71.6 48 70.8
Nn3g18734 Nelumbo nucifera HOM05D004444 ORTHO05D005246 3.6e-11 71.6 52 67.3
Cc02_g29660 Coffea canephora HOM05D004444 ORTHO05D005246 4.7e-11 71.2 48 68.8
Dinv12635 Davidia involucrata HOM05D004444 ORTHO05D005246 4.7e-11 71.2 48 68.8
FvH4_4g37380 Fragaria vesca HOM05D004444 ORTHO05D005246 4.7e-11 71.2 49 71.4
FAN07G0307 Fragaria x ananassa HOM05D004444 ORTHO05D005246 4.7e-11 71.2 49 71.4
FAN17G2490 Fragaria x ananassa HOM05D004444 ORTHO05D005246 4.7e-11 71.2 49 71.4
Glyma.05G000200 Glycine max HOM05D004444 ORTHO05D005246 4.7e-11 71.2 48 70.8
Lsat_1_v5_gn_1_74220 Lactuca sativa HOM05D004444 ORTHO05D005246 4.7e-11 71.2 48 68.8
Sp6g34510 Schrenkiella parvula HOM05D004444 ORTHO05D005246 4.7e-11 71.2 52 59.6
Ah.04g157380 Amaranthus hybridus HOM05D004444 ORTHO05D005246 6.1e-11 70.9 54 61.1
CSS0046171 Camellia sinensis var. sinensis HOM05D004444 ORTHO05D005246 6.1e-11 70.9 48 68.8
Gohir.A12G011300 Gossypium hirsutum HOM05D004444 ORTHO05D005246 6.1e-11 70.9 48 70.8
Gohir.D12G011700 Gossypium hirsutum HOM05D004444 ORTHO05D005246 6.1e-11 70.9 48 70.8
Gohir.D12G011780 Gossypium hirsutum HOM05D004444 ORTHO05D005246 6.1e-11 70.9 48 70.8
Rhsim02G0256600 Rhododendron simsii HOM05D004444 ORTHO05D005246 6.1e-11 70.9 49 65.3
Hund21081 Selenicereus undatus HOM05D004444 ORTHO05D005246 6.1e-11 70.9 54 61.1
arahy.Tifrunner.gnm1.ann1.U9T50E Arachis hypogaea HOM05D004444 ORTHO05D005246 8.0e-11 70.5 48 66.7
Duzib052G0576 Durio zibethinus HOM05D004444 ORTHO05D005246 8.0e-11 70.5 52 67.3
Phvul.004G000500 Phaseolus vulgaris HOM05D004444 ORTHO05D005246 8.0e-11 70.5 45 71.1
Hund09760 Selenicereus undatus HOM05D004444 ORTHO05D005246 8.0e-11 70.5 54 61.1
Psat1g052480 Pisum sativum HOM05D004444 ORTHO05D005246 1.0e-10 70.1 48 66.7
Sed0021880 Sechium edule HOM05D004444 ORTHO05D005246 1.0e-10 70.1 48 70.8
TPR.G25204 Trifolium pratense HOM05D004444 ORTHO05D005246 1.0e-10 70.1 48 66.7
arahy.Tifrunner.gnm1.ann1.8PY7V8 Arachis hypogaea HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 64.6
arahy.Tifrunner.gnm1.ann1.VXL9CA Arachis hypogaea HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 64.6
CiPaw.16G000300 Carya illinoinensis HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 70.8
ClCG11G012850 Citrullus lanatus HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 68.8
MELO3C011776.2 Cucumis melo HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 68.8
CsaV3_5G029250 Cucumis sativus L. HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 68.8
Gorai.008G011700 Gossypium raimondii HOM05D004444 ORTHO05D005246 1.4e-10 69.7 48 68.8
MD13G1000100 Malus domestica HOM05D004444 ORTHO05D005246 1.4e-10 69.7 49 69.4
Oeu006789.1 Olea europaea HOM05D004444 ORTHO05D005246 1.4e-10 69.7 45 68.9
Prupe.1G584800 Prunus persica HOM05D004444 ORTHO05D005246 1.4e-10 69.7 49 71.4
TWI77G0180 Tripterygium wilfordii HOM05D004444 ORTHO05D005246 1.4e-10 69.7 47 72.3
Cfa018662 Carpinus fangiana HOM05D004444 ORTHO05D005246 1.8e-10 69.3 48 70.8
Haze_17392 Corylus avellana HOM05D004444 ORTHO05D005246 1.8e-10 69.3 48 70.8
Glyma.19G000300 Glycine max HOM05D004444 ORTHO05D005246 2.3e-10 68.9 48 66.7
Gorai.013G066500 Gossypium raimondii HOM05D004444 ORTHO05D005246 2.3e-10 68.9 47 68.1
SHI21195 Sapria himalayana HOM05D004444 ORTHO05D005246 2.3e-10 68.9 48 66.7
HPP92_022710 Vanilla planifolia HOM05D004444 ORTHO05D005246 2.3e-10 68.9 47 68.1
C02p60850 Brassica napus HOM05D004444 ORTHO05D005246 3.0e-10 68.6 47 68.1
BolC2t12137H Brassica oleracea HOM05D004444 ORTHO05D005246 3.0e-10 68.6 47 68.1
DCAR_020440 Daucus carota HOM05D004444 ORTHO05D005246 3.0e-10 68.6 50 66.0
MD16G1005800 Malus domestica HOM05D004444 ORTHO05D005246 3.0e-10 68.6 49 69.4
Medtr6g004070 Medicago truncatula HOM05D004444 ORTHO05D005246 3.0e-10 68.6 48 66.7
Sed0005704 Sechium edule HOM05D004444 ORTHO05D005246 4.0e-10 68.2 48 66.7
EL10Ac3g05121 Beta vulgaris HOM05D004444 ORTHO05D005246 5.2e-10 67.8 54 57.4
DCAR_009036 Daucus carota HOM05D004444 ORTHO05D005246 5.2e-10 67.8 48 66.7
Oeu064128.1 Olea europaea HOM05D004444 ORTHO05D005246 5.2e-10 67.8 48 66.7
TWI74G0409 Tripterygium wilfordii HOM05D004444 ORTHO05D005246 5.2e-10 67.8 46 71.7
Gohir.D13G058925 Gossypium hirsutum HOM05D004444 ORTHO05D005246 6.8e-10 67.4 47 68.1
Thhalv10003687m.g Eutrema salsugineum HOM05D004444 ORTHO05D005246 1.2e-09 66.6 52 63.5
A02p40960 Brassica napus HOM05D004444 ORTHO05D005246 1.5e-09 66.2 47 66.0
BraA02t09044Z Brassica rapa HOM05D004444 ORTHO05D005246 1.5e-09 66.2 47 66.0
PGR044G0398 Punica granatum HOM05D004444 ORTHO05D005246 1.5e-09 66.2 51 60.8
BcaNung03855 Brassica carinata HOM05D004444 ORTHO05D005246 2.0e-09 65.9 54 57.4
Sp2g23710 Schrenkiella parvula HOM05D004444 ORTHO05D005246 2.0e-09 65.9 54 57.4
SEGI_02431 Sequoiadendron giganteum HOM05D004444 ORTHO05D005246 2.0e-09 65.9 51 62.7
AL6G34740 Arabidopsis lyrata HOM05D004444 ORTHO05D005246 2.6e-09 65.5 47 63.8
CANSAT78G1818 Cannabis sativa HOM05D004444 ORTHO05D005246 2.6e-09 65.5 48 68.8
Carub.0006s2125 Capsella rubella HOM05D004444 ORTHO05D005246 2.6e-09 65.5 47 63.8
THA.LOC104818390 Tarenaya hassleriana HOM05D004444 ORTHO05D005246 2.6e-09 65.5 54 55.6
Peaxi162Scf00082g00116 Petunia axillaris HOM05D004444 ORTHO05D005246 3.4e-09 65.1 48 64.6
BcaNung03734 Brassica carinata HOM05D004444 ORTHO05D005246 4.4e-09 64.7 47 63.8
A06p34440 Brassica napus HOM05D004444 ORTHO05D005246 4.4e-09 64.7 47 63.8
C07p44100 Brassica napus HOM05D004444 ORTHO05D005246 4.4e-09 64.7 47 63.8
BolC7t44936H Brassica oleracea HOM05D004444 ORTHO05D005246 4.4e-09 64.7 47 63.8
BraA06t26373Z Brassica rapa HOM05D004444 ORTHO05D005246 4.4e-09 64.7 47 63.8
Aa31LG11G2870 Aethionema arabicum HOM05D004444 ORTHO05D005246 7.5e-09 63.9 47 63.8
THA.LOC104800589 Tarenaya hassleriana HOM05D004444 ORTHO05D005246 7.5e-09 63.9 47 61.7
CARHR190060 Cardamine hirsuta HOM05D004444 ORTHO05D005246 1.3e-08 63.2 47 59.6
AUR62005937 Chenopodium quinoa HOM05D004444 ORTHO05D005246 1.3e-08 63.2 51 54.9
AUR62028126 Chenopodium quinoa HOM05D004444 ORTHO05D005246 1.3e-08 63.2 51 54.9
AT5G23450 Arabidopsis thaliana HOM05D004444 ORTHO05D005246 1.7e-08 62.8 46 63.0
unitig_61.g26367 Utricularia gibba HOM05D004444 ORTHO05D005246 1.7e-08 62.8 53 49.1
CAN.G1045.17 Capsicum annuum HOM05D004444 ORTHO05D005246 3.7e-08 61.6 48 60.4
Solyc01g096500.3 Solanum lycopersicum HOM05D004444 ORTHO05D005246 3.7e-08 61.6 48 60.4
Sopen01g040230 Solanum pennellii HOM05D004444 ORTHO05D005246 3.7e-08 61.6 48 60.4
Nitab4.5_0003481g0120 Nicotiana tabacum HOM05D004444 ORTHO05D005246 4.9e-08 61.2 48 60.4
Nitab4.5_0005808g0020 Nicotiana tabacum HOM05D004444 ORTHO05D005246 4.9e-08 61.2 48 60.4
SMO239G0136 Selaginella moellendorffii HOM05D004444 ORTHO05D005246 5.9e-06 54.3 53 52.8
Pp3c2_22010 Physcomitrium patens HOM05D004444 ORTHO05D005246 7.8e-06 53.9 51 47.1


User provided reference genes

Program Settings