Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028182 Vanilla planifolia HOM05D006404 ORTHO05D008170 7.3e-183 643.7 303 100.0
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 3.3e-119 432.2 305 67.9
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 1.1e-114 417.2 303 61.7
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 8.2e-110 401.0 303 61.4
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 4.1e-109 398.7 303 59.4
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 4.1e-109 398.7 304 60.5
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 9.1e-109 397.5 307 59.6
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 1.2e-108 397.1 307 60.9
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 2.0e-108 396.4 307 61.6
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 2.0e-108 396.4 308 61.7
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 2.7e-108 396.0 309 58.9
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 2.2e-107 392.9 307 60.6
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 2.2e-107 392.9 303 58.4
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 3.8e-107 392.1 303 59.4
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 8.5e-107 391.0 306 59.8
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 3.2e-106 389.0 306 59.5
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 4.2e-106 388.7 311 59.2
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.2e-105 387.1 311 58.8
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 1.6e-105 386.7 304 58.9
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 1.6e-105 386.7 307 59.0
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 1.6e-105 386.7 306 58.8
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 2.1e-105 386.3 307 58.6
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 2.7e-105 386.0 307 58.6
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 4.7e-105 385.2 307 57.0
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 6.1e-105 384.8 307 56.7
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.3e-104 382.9 306 58.8
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 5.2e-104 381.7 308 57.5
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 5.2e-104 381.7 303 58.1
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 6.8e-104 381.3 307 58.6
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 1.2e-103 380.6 301 57.8
Gohir.A05G070000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.2e-103 380.6 307 59.6
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 2.0e-103 379.8 308 57.8
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 9.8e-103 377.5 306 57.8
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 2.2e-102 376.3 308 57.1
Os01g0275900 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 2.2e-102 376.3 268 65.7
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 4.8e-102 375.2 307 58.6
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 1.1e-101 374.0 301 57.5
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 1.8e-101 373.2 302 58.3
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 5.4e-101 371.7 305 56.4
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 9.1e-101 370.9 307 56.7
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 1.6e-100 370.2 301 56.5
Gohir.D05G073000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.5e-100 369.0 302 57.9
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 5.9e-100 368.2 270 61.1
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 1.1e-98 364.0 307 56.4
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 7.2e-98 361.3 303 55.1
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 1.6e-97 360.1 304 54.6
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 2.1e-97 359.8 308 54.9
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 2.8e-97 359.4 310 53.9
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 6.1e-97 358.2 304 55.3
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 4.0e-96 355.5 301 55.1
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 8.8e-96 354.4 303 55.1
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 1.5e-95 353.6 303 56.8
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 1.3e-94 350.5 306 55.6
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 1.7e-94 350.1 302 55.0
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 2.8e-94 349.4 304 53.0
Gohir.A09G112300 Gossypium hirsutum HOM05D006404 ORTHO05D008170 8.3e-94 347.8 303 56.1
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.1e-93 347.4 303 55.8
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 1.1e-93 347.4 305 53.8
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 5.4e-93 345.1 301 52.2
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 1.0e-91 340.9 308 53.2
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 2.3e-91 339.7 266 58.3
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 2.9e-91 339.3 303 53.5
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 2.9e-91 339.3 301 52.2
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 8.6e-91 337.8 303 52.5
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 1.9e-90 336.7 302 51.0
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 1.9e-90 336.7 302 51.0
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 1.9e-90 336.7 304 53.3
Phvul.002G034601 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.9e-90 336.7 305 49.2
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 3.3e-90 335.9 268 59.0
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 2.8e-89 332.8 304 52.3
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 6.8e-88 328.2 278 55.0
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 1.2e-87 327.4 312 52.6
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 2.9e-86 322.8 309 51.8
CSS0019486 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 3.7e-86 322.4 244 59.4
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 3.7e-86 322.4 270 56.7
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 4.9e-86 322.0 266 56.8
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 1.8e-85 320.1 314 51.6
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 3.2e-85 319.3 304 51.3
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 1.2e-84 317.4 302 52.3
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 2.0e-84 316.6 304 50.0
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 3.5e-84 315.8 320 48.1
unitig_27.g25000 Utricularia gibba HOM05D006404 ORTHO05D008170 5.6e-82 308.5 269 54.3
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 7.3e-82 308.1 309 49.8
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 3.6e-81 305.8 249 59.0
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 8.0e-81 304.7 234 59.4
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 2.6e-79 299.7 274 50.4
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 6.4e-78 295.0 198 67.2
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 1.9e-77 293.5 278 49.6
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 2.7e-76 289.7 267 50.9
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 8.6e-75 284.6 305 47.5
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 4.4e-71 272.3 307 45.6
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 6.4e-70 268.5 307 45.3
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 7.1e-69 265.0 321 40.8
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 9.5e-66 254.6 303 46.2
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 1.4e-64 250.8 220 52.7
HPP92_012439 Vanilla planifolia HOM05D006404 ORTHO05D008170 1.4e-61 240.7 207 63.3
PGSC0003DMG400035426 Solanum tuberosum HOM05D006404 ORTHO05D008170 3.3e-58 229.6 218 50.5
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 4.6e-44 182.6 103 76.7
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 1.2e-36 157.9 193 38.9
PGSC0003DMG400025695 Solanum tuberosum HOM05D006404 ORTHO05D008170 2.9e-22 110.2 90 52.2
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 3.3e-10 70.1 42 71.4
Glyma.11G015367 Glycine max HOM05D006404 ORTHO05D008170 3.1e-08 63.5 49 53.1
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.5e-07 61.2 129 28.7


User provided reference genes

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