Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_028019 Vanilla planifolia HOM05D002961 ORTHO05D003426 3.1e-119 431.8 214 100.0
HPP92_018616 Vanilla planifolia HOM05D002961 ORTHO05D003426 1.1e-63 247.3 234 65.4
HPP92_008436 Vanilla planifolia HOM05D002961 ORTHO05D003426 1.1e-26 124.4 229 39.7
Glyma.10G109000 Glycine max HOM05D002961 ORTHO05D003426 1.4e-26 124.0 215 38.6
Nn2g13743 Nelumbo nucifera HOM05D002961 ORTHO05D003426 2.3e-26 123.2 215 41.4
Cfa001671 Carpinus fangiana HOM05D002961 ORTHO05D003426 4.4e-25 119.0 231 39.4
Dinv00190 Davidia involucrata HOM05D002961 ORTHO05D003426 7.5e-25 118.2 225 39.1
PGR142G2276 Punica granatum HOM05D002961 ORTHO05D003426 9.8e-25 117.9 219 38.8
Actinidia22443 Actinidia chinensis HOM05D002961 ORTHO05D003426 2.2e-24 116.7 211 39.8
Sc09g0006170 Simmondsia chinensis HOM05D002961 ORTHO05D003426 2.9e-24 116.3 209 39.7
Lsat_1_v5_gn_8_20401 Lactuca sativa HOM05D002961 ORTHO05D003426 3.7e-24 115.9 238 34.9
unitig_749.g13572 Utricularia gibba HOM05D002961 ORTHO05D003426 4.9e-24 115.5 229 36.7
Aqoxy1G01189 Aquilegia oxysepala HOM05D002961 ORTHO05D003426 1.1e-23 114.4 217 37.8
MSTRG.9164 Avicennia marina HOM05D002961 ORTHO05D003426 1.1e-23 114.4 218 38.1
TAR633G0023 Trochodendron aralioides HOM05D002961 ORTHO05D003426 1.4e-23 114.0 221 37.1
Phvul.007G239400 Phaseolus vulgaris HOM05D002961 ORTHO05D003426 2.4e-23 113.2 211 37.9
CAN.G688.8 Capsicum annuum HOM05D002961 ORTHO05D003426 3.2e-23 112.8 220 38.2
Hma1.2p1_0366F.1_g136890 Hydrangea macrophylla HOM05D002961 ORTHO05D003426 4.1e-23 112.5 223 38.6
QL08p055207 Quercus lobata HOM05D002961 ORTHO05D003426 4.1e-23 112.5 211 38.4
QL08p055257 Quercus lobata HOM05D002961 ORTHO05D003426 4.1e-23 112.5 211 38.4
Phvul.007G239500 Phaseolus vulgaris HOM05D002961 ORTHO05D003426 7.1e-23 111.7 227 37.9
ClCG05G021100 Citrullus lanatus HOM05D002961 ORTHO05D003426 9.2e-23 111.3 225 35.6
VMungo0720G2309 Vigna mungo HOM05D002961 ORTHO05D003426 1.2e-22 110.9 213 38.5
Haze_16863 Corylus avellana HOM05D002961 ORTHO05D003426 2.1e-22 110.2 228 39.0
FAN01G0092 Fragaria x ananassa HOM05D002961 ORTHO05D003426 2.1e-22 110.2 225 36.4
RcHm_v2.0_Chr1g0362951 Rosa chinensis HOM05D002961 ORTHO05D003426 2.7e-22 109.8 215 36.3
FAN10G0478 Fragaria x ananassa HOM05D002961 ORTHO05D003426 3.5e-22 109.4 225 36.0
Sopen10g034080 Solanum pennellii HOM05D002961 ORTHO05D003426 4.6e-22 109.0 216 38.4
Lalb_Chr19g0129101 Lupinus albus HOM05D002961 ORTHO05D003426 6.0e-22 108.6 216 38.9
FAN03G0700 Fragaria x ananassa HOM05D002961 ORTHO05D003426 7.8e-22 108.2 225 36.0
FAN06G3681 Fragaria x ananassa HOM05D002961 ORTHO05D003426 7.8e-22 108.2 225 35.6
FAN06G4372 Fragaria x ananassa HOM05D002961 ORTHO05D003426 7.8e-22 108.2 225 35.6
Peaxi162Scf01227g00007 Petunia axillaris HOM05D002961 ORTHO05D003426 7.8e-22 108.2 237 37.1
Nitab4.5_0000071g0200 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.0e-21 107.8 210 38.1
Rhsim03G0118600 Rhododendron simsii HOM05D002961 ORTHO05D003426 1.0e-21 107.8 234 37.6
Solyc10g084640.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 1.3e-21 107.5 216 38.0
FAN10G1125 Fragaria x ananassa HOM05D002961 ORTHO05D003426 1.7e-21 107.1 228 36.0
Lj6g0009968 Lotus japonicus HOM05D002961 ORTHO05D003426 1.7e-21 107.1 229 35.4
BcaC01g05491 Brassica carinata HOM05D002961 ORTHO05D003426 2.3e-21 106.7 213 35.2
Nitab4.5_0007307g0010 Nicotiana tabacum HOM05D002961 ORTHO05D003426 2.3e-21 106.7 210 37.6
PSO063G7402 Papaver somniferum HOM05D002961 ORTHO05D003426 2.3e-21 106.7 207 35.3
PSO339G6169 Papaver somniferum HOM05D002961 ORTHO05D003426 2.3e-21 106.7 214 34.6
C03p25890 Brassica napus HOM05D002961 ORTHO05D003426 3.9e-21 105.9 213 34.7
BolC3t14973H Brassica oleracea HOM05D002961 ORTHO05D003426 3.9e-21 105.9 213 35.2
COL.COLO4_12162 Corchorus olitorius HOM05D002961 ORTHO05D003426 3.9e-21 105.9 213 38.5
DCAR_006426 Daucus carota HOM05D002961 ORTHO05D003426 3.9e-21 105.9 210 36.7
FvH4_7g19050 Fragaria vesca HOM05D002961 ORTHO05D003426 3.9e-21 105.9 225 35.1
Ciclev10032618m.g Citrus clementina HOM05D002961 ORTHO05D003426 5.1e-21 105.5 214 36.9
MELO3C012417.2 Cucumis melo HOM05D002961 ORTHO05D003426 5.1e-21 105.5 224 34.8
Cpa.g.c31528 Carica papaya HOM05D002961 ORTHO05D003426 6.6e-21 105.1 228 37.3
MD01G1105800 Malus domestica HOM05D002961 ORTHO05D003426 6.6e-21 105.1 205 36.6
TAR636G2919 Trochodendron aralioides HOM05D002961 ORTHO05D003426 6.6e-21 105.1 215 37.2
BcaB01g03642 Brassica carinata HOM05D002961 ORTHO05D003426 8.6e-21 104.8 213 35.7
CANSAT56G0472 Cannabis sativa HOM05D002961 ORTHO05D003426 8.6e-21 104.8 214 36.9
A03p21820 Brassica napus HOM05D002961 ORTHO05D003426 1.1e-20 104.4 213 35.7
BraA03t11418Z Brassica rapa HOM05D002961 ORTHO05D003426 1.1e-20 104.4 213 35.7
HanXRQChr12g0368721 Helianthus annuus HOM05D002961 ORTHO05D003426 1.1e-20 104.4 241 34.4
CsaV3_5G036170 Cucumis sativus L. HOM05D002961 ORTHO05D003426 1.5e-20 104.0 221 34.4
Manes.10G048200 Manihot esculenta HOM05D002961 ORTHO05D003426 1.5e-20 104.0 221 36.7
THA.LOC104825225 Tarenaya hassleriana HOM05D002961 ORTHO05D003426 1.9e-20 103.6 208 36.5
Sed0014207 Sechium edule HOM05D002961 ORTHO05D003426 2.5e-20 103.2 225 35.6
SGA_v2.0_scaffold62G21403 Striga asiatica HOM05D002961 ORTHO05D003426 2.5e-20 103.2 213 35.7
Psat6g129400 Pisum sativum HOM05D002961 ORTHO05D003426 5.6e-20 102.1 235 33.6
ECA233G3034 Erigeron canadensis HOM05D002961 ORTHO05D003426 7.3e-20 101.7 220 34.1
SHI08927 Sapria himalayana HOM05D002961 ORTHO05D003426 7.3e-20 101.7 211 37.0
Manes.07G097400 Manihot esculenta HOM05D002961 ORTHO05D003426 9.5e-20 101.3 221 35.7
Gohir.A05G296300 Gossypium hirsutum HOM05D002961 ORTHO05D003426 1.2e-19 100.9 227 37.0
Potri.010G224800 Populus trichocarpa HOM05D002961 ORTHO05D003426 1.6e-19 100.5 220 36.4
Zm00001eb004140 Zea mays HOM05D002961 ORTHO05D003426 1.6e-19 100.5 213 35.7
QL08p055272 Quercus lobata HOM05D002961 ORTHO05D003426 2.1e-19 100.1 231 35.9
Duzib106G0956 Durio zibethinus HOM05D002961 ORTHO05D003426 2.8e-19 99.8 227 34.8
MELO3C012418.2 Cucumis melo HOM05D002961 ORTHO05D003426 4.7e-19 99.0 228 30.7
Migut.F01970 Erythranthe guttata HOM05D002961 ORTHO05D003426 4.7e-19 99.0 219 36.1
Potri.008G037700 Populus trichocarpa HOM05D002961 ORTHO05D003426 4.7e-19 99.0 221 35.7
SalBow6G2357 Salvia bowleyana HOM05D002961 ORTHO05D003426 4.7e-19 99.0 223 34.5
Thecc.10G077100 Theobroma cacao HOM05D002961 ORTHO05D003426 4.7e-19 99.0 228 36.0
AL4G36330 Arabidopsis lyrata HOM05D002961 ORTHO05D003426 6.2e-19 98.6 216 34.7
Thhalv10017189m.g Eutrema salsugineum HOM05D002961 ORTHO05D003426 6.2e-19 98.6 213 34.7
EL10Ac2g02683 Beta vulgaris HOM05D002961 ORTHO05D003426 8.1e-19 98.2 200 35.0
Glyma.02G156700 Glycine max HOM05D002961 ORTHO05D003426 8.1e-19 98.2 226 35.0
Sabra10G0173800 Salix brachista HOM05D002961 ORTHO05D003426 8.1e-19 98.2 219 35.6
Zm00001eb403080 Zea mays HOM05D002961 ORTHO05D003426 8.1e-19 98.2 207 36.2
CiPaw.01G271000 Carya illinoinensis HOM05D002961 ORTHO05D003426 1.1e-18 97.8 208 36.1
Gohir.D05G296200 Gossypium hirsutum HOM05D002961 ORTHO05D003426 1.1e-18 97.8 227 36.6
TWI38G1556 Tripterygium wilfordii HOM05D002961 ORTHO05D003426 1.4e-18 97.4 226 37.2
Gorai.009G313000 Gossypium raimondii HOM05D002961 ORTHO05D003426 1.8e-18 97.1 227 36.1
Cc02_g11190 Coffea canephora HOM05D002961 ORTHO05D003426 2.3e-18 96.7 231 32.9
TWI63G1345 Tripterygium wilfordii HOM05D002961 ORTHO05D003426 3.1e-18 96.3 219 36.5
AT2G39020 Arabidopsis thaliana HOM05D002961 ORTHO05D003426 4.0e-18 95.9 213 34.7
Phvul.007G240100 Phaseolus vulgaris HOM05D002961 ORTHO05D003426 4.0e-18 95.9 222 33.3
Aa31LG5G20660 Aethionema arabicum HOM05D002961 ORTHO05D003426 5.2e-18 95.5 213 35.2
CsaV3_5G036180 Cucumis sativus L. HOM05D002961 ORTHO05D003426 5.2e-18 95.5 229 31.4
TPR.G13797 Trifolium pratense HOM05D002961 ORTHO05D003426 5.2e-18 95.5 226 32.7
CARHR133810 Cardamine hirsuta HOM05D002961 ORTHO05D003426 6.8e-18 95.1 216 34.7
Manes.07G085800 Manihot esculenta HOM05D002961 ORTHO05D003426 6.8e-18 95.1 222 34.2
THA.LOC104826902 Tarenaya hassleriana HOM05D002961 ORTHO05D003426 6.8e-18 95.1 214 35.0
Medtr1g049370 Medicago truncatula HOM05D002961 ORTHO05D003426 1.2e-17 94.4 227 33.0
Ca_03078_v3 Cicer arietinum L. HOM05D002961 ORTHO05D003426 2.6e-17 93.2 235 33.2
Oeu031329.1 Olea europaea HOM05D002961 ORTHO05D003426 2.6e-17 93.2 216 35.6
CDE02G3576 Ceratophyllum demersum HOM05D002961 ORTHO05D003426 3.4e-17 92.8 222 33.3
CSS0004023 Camellia sinensis var. sinensis HOM05D002961 ORTHO05D003426 7.6e-17 91.7 233 32.2
DCAR_006425 Daucus carota HOM05D002961 ORTHO05D003426 7.6e-17 91.7 222 31.5
ATR0680G063 Amborella trichopoda HOM05D002961 ORTHO05D003426 9.9e-17 91.3 205 36.6
ATR1149G016 Amborella trichopoda HOM05D002961 ORTHO05D003426 9.9e-17 91.3 220 34.1
Lalb_Chr01g0010461 Lupinus albus HOM05D002961 ORTHO05D003426 1.3e-16 90.9 240 32.1
Sp4g03890 Schrenkiella parvula HOM05D002961 ORTHO05D003426 1.3e-16 90.9 213 31.0
Sp4g21380 Schrenkiella parvula HOM05D002961 ORTHO05D003426 1.3e-16 90.9 213 33.8
Carub.0004s2107 Capsella rubella HOM05D002961 ORTHO05D003426 2.2e-16 90.1 230 32.6
Sed0016707 Sechium edule HOM05D002961 ORTHO05D003426 2.9e-16 89.7 222 31.5
PSO210G3713 Papaver somniferum HOM05D002961 ORTHO05D003426 3.8e-16 89.4 228 28.9
AT2G39030 Arabidopsis thaliana HOM05D002961 ORTHO05D003426 4.9e-16 89.0 229 32.3
MELO3C012419.2 Cucumis melo HOM05D002961 ORTHO05D003426 4.9e-16 89.0 211 31.8
Potri.008G037600 Populus trichocarpa HOM05D002961 ORTHO05D003426 4.9e-16 89.0 225 34.2
AUR62030580 Chenopodium quinoa HOM05D002961 ORTHO05D003426 6.4e-16 88.6 203 36.0
Lj5g0009305 Lotus japonicus HOM05D002961 ORTHO05D003426 8.4e-16 88.2 235 31.5
PSO210G6097 Papaver somniferum HOM05D002961 ORTHO05D003426 1.1e-15 87.8 224 29.5
VMungo0720G2456 Vigna mungo HOM05D002961 ORTHO05D003426 1.1e-15 87.8 222 33.3
Manes.07G097500 Manihot esculenta HOM05D002961 ORTHO05D003426 1.4e-15 87.4 216 34.3
MSTRG.9163 Avicennia marina HOM05D002961 ORTHO05D003426 1.9e-15 87.0 190 35.3
Carub.0004s2106 Capsella rubella HOM05D002961 ORTHO05D003426 1.9e-15 87.0 212 32.5
PSO407G0084 Papaver somniferum HOM05D002961 ORTHO05D003426 3.2e-15 86.3 237 32.5
Carub.0004s2109 Capsella rubella HOM05D002961 ORTHO05D003426 7.1e-15 85.1 216 32.9
Atru.chr12.813 Acer truncatum HOM05D002961 ORTHO05D003426 9.2e-15 84.7 217 34.1
PSO729G0216 Papaver somniferum HOM05D002961 ORTHO05D003426 1.6e-14 84.0 215 30.2
SalBow4G2042 Salvia bowleyana HOM05D002961 ORTHO05D003426 2.1e-14 83.6 211 33.2
CANSAT35G1379 Cannabis sativa HOM05D002961 ORTHO05D003426 4.6e-14 82.4 229 31.0
HPP92_028020 Vanilla planifolia HOM05D002961 ORTHO05D427303 4.6e-14 82.4 170 38.2
Sed0004049 Sechium edule HOM05D002961 ORTHO05D003426 7.8e-14 81.6 212 31.6
EL10Ac2g04865 Beta vulgaris HOM05D002961 ORTHO05D003426 2.3e-13 80.1 244 29.1
Prupe.2G211200 Prunus persica HOM05D002961 ORTHO05D003426 2.3e-13 80.1 179 33.0
EL10Ac2g04869 Beta vulgaris HOM05D002961 ORTHO05D003426 3.0e-13 79.7 240 30.0
CsaV3_5G036190 Cucumis sativus L. HOM05D002961 ORTHO05D003426 3.9e-13 79.3 210 29.5
Os03g0151600 Oryza sativa ssp. japonica HOM05D002961 ORTHO05D003426 1.9e-12 77.0 127 38.6
CDE02G1397 Ceratophyllum demersum HOM05D002961 ORTHO05D003426 5.6e-12 75.5 177 36.2
SEGI_09913 Sequoiadendron giganteum HOM05D002961 ORTHO05D003426 7.3e-12 75.1 202 30.2
AL4G36340 Arabidopsis lyrata HOM05D002961 ORTHO05D003426 1.2e-11 74.3 234 30.8
Nitab4.5_0001736g0010 Nicotiana tabacum HOM05D002961 ORTHO05D003426 2.8e-11 73.2 227 28.2
Sed0001125 Sechium edule HOM05D002961 ORTHO05D003426 2.8e-11 73.2 202 30.2
Nitab4.5_0000264g0170 Nicotiana tabacum HOM05D002961 ORTHO05D003426 3.6e-11 72.8 227 28.2
SMO116G0049 Selaginella moellendorffii HOM05D002961 ORTHO05D003426 1.8e-10 70.5 193 30.6
Sed0008789 Sechium edule HOM05D002961 ORTHO05D003426 3.1e-10 69.7 206 29.1
Cc02_g11200 Coffea canephora HOM05D002961 ORTHO05D003426 5.2e-10 68.9 225 30.2
Mapoly0179s0017 Marchantia polymorpha HOM05D002961 ORTHO05D003426 5.2e-10 68.9 203 30.0
AagrBONN_evm.TU.Sc2ySwM_228.2872 Anthoceros agrestis HOM05D002961 ORTHO05D003426 6.9e-10 68.6 202 30.2
VMungo1383G2373 Vigna mungo HOM05D002961 ORTHO05D003426 8.9e-10 68.2 184 32.1
GSVIVG01016243001 Vitis vinifera HOM05D002961 ORTHO05D003426 3.4e-09 66.2 202 26.7
Sopen08g002710 Solanum pennellii HOM05D002961 ORTHO05D003426 7.6e-09 65.1 233 26.6
Lj3P882T56 Lonicera japonica HOM05D002961 ORTHO05D003426 9.9e-09 64.7 143 32.9
Nitab4.5_0003338g0090 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.3e-08 64.3 240 26.2
Pp3c5_21790 Physcomitrium patens HOM05D002961 ORTHO05D003426 1.3e-08 64.3 206 28.2
AUR62022924 Chenopodium quinoa HOM05D002961 ORTHO05D003426 6.4e-08 62.0 213 28.2
Carub.0007s3340 Capsella rubella HOM05D002961 ORTHO05D003426 1.1e-07 61.2 175 31.4
Solyc08g006765.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 1.4e-07 60.8 228 27.2
Atru.chr12.812 Acer truncatum HOM05D002961 ORTHO05D003426 1.9e-07 60.5 222 29.3
Solyc08g006730.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 1.9e-07 60.5 224 27.2
HPP92_018617 Vanilla planifolia HOM05D002961 ORTHO05D003426 2.4e-07 60.1 90 44.4
CAN.G559.6 Capsicum annuum HOM05D002961 ORTHO05D003426 9.3e-07 58.2 224 27.2
AL92U10040 Arabidopsis lyrata HOM05D002961 ORTHO05D003426 1.6e-06 57.4 75 48.0
Dinv36421 Davidia involucrata HOM05D002961 ORTHO05D003426 2.7e-06 56.6 155 32.3
PGSC0003DMG400026301 Solanum tuberosum HOM05D002961 ORTHO05D003426 2.7e-06 56.6 225 27.6
PGSC0003DMG400014499 Solanum tuberosum HOM05D002961 ORTHO05D003426 4.6e-06 55.8 219 25.1
Cfa001668 Carpinus fangiana HOM05D002961 ORTHO05D003426 7.8e-06 55.1 186 32.3


User provided reference genes

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