Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 4.6e-184 647.9 357 100.0
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.5e-102 377.1 203 93.6
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.2e-56 224.6 364 41.5
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 3.4e-54 216.5 374 43.9
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 9.2e-52 208.4 371 38.8
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 4.6e-51 206.1 364 39.6
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 6.0e-51 205.7 373 43.7
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 3.9e-50 203.0 361 42.7
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 6.6e-50 202.2 377 39.8
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 6.6e-50 202.2 373 41.8
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 1.1e-49 201.4 369 40.1
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 9.6e-49 198.4 376 39.6
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.4e-47 193.7 363 40.5
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 5.2e-47 192.6 369 38.8
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.9e-44 184.1 370 37.8
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 7.8e-43 178.7 364 41.8
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 7.8e-43 178.7 365 39.2
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 1.0e-42 178.3 368 36.1
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.3e-42 177.2 375 39.7
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 3.0e-42 176.8 359 34.3
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 5.1e-42 176.0 363 37.7
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 8.7e-42 175.3 365 40.3
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.1e-41 174.9 386 38.1
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 1.9e-41 174.1 378 35.7
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 3.3e-41 173.3 362 37.8
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 3.3e-41 173.3 382 35.9
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 3.3e-41 173.3 364 34.3
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 4.3e-41 172.9 383 36.0
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 5.6e-41 172.6 364 38.5
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 9.6e-41 171.8 373 38.6
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.6e-40 171.0 366 35.2
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 4.8e-40 169.5 355 37.2
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 4.8e-40 169.5 384 37.2
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 6.2e-40 169.1 370 35.7
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 8.1e-40 168.7 370 34.1
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.1e-39 168.3 369 39.0
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.4e-39 167.9 345 39.7
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.4e-39 167.9 360 40.6
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.8e-39 167.5 358 37.2
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.8e-39 167.5 350 34.9
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 1.8e-39 167.5 384 37.0
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 3.1e-39 166.8 368 34.0
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.1e-39 166.8 385 39.5
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 3.1e-39 166.8 370 38.1
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 4.0e-39 166.4 370 39.7
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 4.0e-39 166.4 373 42.1
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 4.0e-39 166.4 367 35.1
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 5.3e-39 166.0 371 35.8
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 6.9e-39 165.6 371 36.1
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 1.2e-38 164.9 357 37.0
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.2e-38 164.9 373 38.6
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 2.6e-38 163.7 362 39.8
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 7.6e-38 162.2 381 34.1
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 7.6e-38 162.2 355 34.4
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 7.6e-38 162.2 367 39.2
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.7e-37 161.0 371 36.1
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 2.2e-37 160.6 367 37.1
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.9e-37 160.2 362 35.9
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.9e-37 160.2 387 39.0
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 3.8e-37 159.8 385 39.5
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 3.8e-37 159.8 372 37.1
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 3.8e-37 159.8 349 38.1
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 6.4e-37 159.1 381 37.0
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.4e-37 158.7 365 35.1
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 8.4e-37 158.7 362 34.3
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 1.4e-36 157.9 368 38.9
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 1.4e-36 157.9 377 35.3
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.9e-36 157.5 374 35.0
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 2.4e-36 157.1 374 36.1
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 3.2e-36 156.8 375 39.5
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 5.4e-36 156.0 369 36.0
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 7.1e-36 155.6 362 35.4
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 7.1e-36 155.6 378 39.2
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 9.3e-36 155.2 369 39.6
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 2.1e-35 154.1 380 37.9
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 2.7e-35 153.7 377 37.9
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 2.7e-35 153.7 404 33.7
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 2.7e-35 153.7 373 35.9
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 7.9e-35 152.1 374 34.0
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.0e-34 151.8 375 33.6
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.3e-34 151.4 371 34.2
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 3.0e-34 150.2 358 34.4
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.0e-34 150.2 358 34.4
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 3.9e-34 149.8 378 34.9
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 3.9e-34 149.8 378 32.3
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 5.1e-34 149.4 372 39.5
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.7e-34 148.7 361 35.2
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 1.5e-33 147.9 330 34.8
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 7.4e-33 145.6 336 35.4
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 7.4e-33 145.6 380 35.8
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.3e-32 144.8 361 35.7
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 1.3e-32 144.8 369 32.2
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 2.1e-32 144.1 378 33.1
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 6.2e-32 142.5 366 32.2
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.2e-32 142.5 370 31.9
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 8.1e-32 142.1 367 33.2
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 8.1e-32 142.1 317 35.3
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 8.1e-32 142.1 352 31.0
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 8.1e-32 142.1 379 35.1
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 1.1e-31 141.7 364 35.4
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 1.4e-31 141.4 417 30.9
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.4e-31 141.4 362 35.6
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 1.8e-31 141.0 375 31.7
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 1.8e-31 141.0 371 32.9
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.1e-31 140.2 364 32.4
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 5.3e-31 139.4 384 31.0
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 5.3e-31 139.4 366 33.6
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.3e-31 139.4 254 37.8
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.2e-30 138.3 253 38.3
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.2e-30 138.3 327 36.7
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 2.6e-30 137.1 366 31.1
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 2.6e-30 137.1 350 34.6
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 3.4e-30 136.7 377 31.6
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 4.5e-30 136.3 364 33.8
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 5.8e-30 136.0 366 34.4
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 9.9e-30 135.2 407 34.2
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 9.9e-30 135.2 406 33.3
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 9.9e-30 135.2 416 30.3
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 1.7e-29 134.4 366 31.7
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 2.2e-29 134.0 375 31.7
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 2.2e-29 134.0 348 32.5
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 4.9e-29 132.9 364 32.1
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 6.4e-29 132.5 326 32.8
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 1.1e-28 131.7 238 37.4
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.4e-28 131.3 370 32.4
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.9e-28 131.0 378 32.0
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 5.5e-28 129.4 374 31.0
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.1e-28 129.0 359 32.0
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.1e-28 129.0 359 31.8
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 2.1e-27 127.5 400 30.0
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 2.7e-27 127.1 363 31.4
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 3.5e-27 126.7 368 30.2
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 3.5e-27 126.7 256 34.8
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 3.5e-27 126.7 253 37.9
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 1.3e-26 124.8 322 32.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.8e-26 124.4 359 32.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 3.9e-26 123.2 370 33.0
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 3.9e-26 123.2 354 28.5
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 3.9e-26 123.2 380 31.1
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 6.7e-26 122.5 261 33.7
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 8.7e-26 122.1 324 34.3
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.1e-25 121.7 362 30.9
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 4.3e-25 119.8 329 31.6
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 4.3e-25 119.8 348 31.9
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 5.6e-25 119.4 318 34.3
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 7.4e-25 119.0 348 31.6
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.6e-24 117.9 231 38.1
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 4.8e-24 116.3 315 35.2
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 8.2e-24 115.5 268 35.1
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.4e-23 114.8 371 33.7
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 3.1e-23 113.6 315 34.6
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 4.5e-22 109.8 263 33.5
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 5.8e-22 109.4 322 30.4
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 1.3e-21 108.2 349 31.5
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 7.1e-20 102.4 206 35.0
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.6e-19 101.3 351 29.9
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 4.6e-19 99.8 191 34.0
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 7.9e-19 99.0 346 29.8
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 7.9e-19 99.0 230 37.0
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.0e-18 98.6 357 27.7
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 3.0e-18 97.1 338 28.4
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.5e-17 94.7 369 29.5
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 4.8e-16 89.7 200 29.5
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 1.1e-15 88.6 223 34.1
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 9.0e-15 85.5 251 33.5
Mapoly0001s0546 Marchantia polymorpha HOM05D003379 ORTHO05D003862 7.6e-14 82.4 464 27.4
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 1.0e-13 82.0 200 30.0
Pp3c5_23700 Physcomitrium patens HOM05D003379 ORTHO05D003862 3.8e-13 80.1 256 30.5
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 4.2e-12 76.6 159 34.6
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 1.6e-11 74.7 237 30.0
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 2.1e-11 74.3 352 23.9
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 7.9e-11 72.4 211 31.3
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 5.1e-10 69.7 232 28.4
Ah.14g088790 Amaranthus hybridus HOM05D003379 ORTHO05D003862 3.7e-08 63.5 183 36.1
C09p44800 Brassica napus HOM05D003379 ORTHO05D003862 6.3e-08 62.8 247 27.1
C01p04570 Brassica napus HOM05D003379 ORTHO05D003862 1.8e-07 61.2 235 26.0
C09p09610 Brassica napus HOM05D003379 ORTHO05D003862 3.1e-07 60.5 141 31.9
Cpa.g.sc38.89 Carica papaya HOM05D003379 ORTHO05D003862 4.1e-07 60.1 151 34.4
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 5.3e-07 59.7 64 46.9
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 6.9e-07 59.3 64 46.9
C08p33300 Brassica napus HOM05D003379 ORTHO05D003862 1.2e-06 58.5 73 42.5
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 1.2e-06 58.5 319 25.7
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-06 57.8 146 30.8
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-06 57.8 146 30.8
C03p62180 Brassica napus HOM05D003379 ORTHO05D003862 4.5e-06 56.6 64 43.8


User provided reference genes

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