Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027774 Vanilla planifolia HOM05D004029 ORTHO05D004613 8.7e-78 293.5 142 100.0
HPP92_020359 Vanilla planifolia HOM05D004029 ORTHO05D004613 2.9e-49 198.7 98 100.0
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 1.5e-42 176.4 98 81.6
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 1.3e-41 173.3 98 84.7
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 2.9e-41 172.2 98 81.6
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 2.9e-41 172.2 98 80.6
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 3.8e-41 171.8 98 81.6
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 3.8e-41 171.8 98 81.6
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 3.8e-41 171.8 98 81.6
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 3.8e-41 171.8 98 81.6
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 3.8e-41 171.8 98 81.6
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 5.0e-41 171.4 98 80.6
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 5.0e-41 171.4 98 81.6
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 5.0e-41 171.4 98 82.7
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 8.5e-41 170.6 98 82.7
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 8.5e-41 170.6 98 79.6
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 8.5e-41 170.6 98 82.7
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 8.5e-41 170.6 98 79.6
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 1.1e-40 170.2 98 82.7
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 1.1e-40 170.2 98 79.6
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 2.5e-40 169.1 98 81.6
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 2.5e-40 169.1 98 81.6
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 3.2e-40 168.7 106 78.3
Dinv08326 Davidia involucrata HOM05D004029 ORTHO05D004613 3.2e-40 168.7 98 80.6
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.5e-40 167.9 98 79.6
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.5e-40 167.9 98 79.6
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 5.5e-40 167.9 98 79.6
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 7.2e-40 167.5 98 78.6
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 9.4e-40 167.2 107 74.8
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 9.4e-40 167.2 98 80.6
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 9.4e-40 167.2 98 79.6
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 1.2e-39 166.8 98 80.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 1.2e-39 166.8 98 77.6
Atru.chr2.2810 Acer truncatum HOM05D004029 ORTHO05D004613 1.6e-39 166.4 98 78.6
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 1.6e-39 166.4 98 80.6
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.6e-39 166.4 107 75.7
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.6e-39 166.4 107 75.7
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 1.6e-39 166.4 98 80.6
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 2.1e-39 166.0 98 80.6
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 2.1e-39 166.0 98 80.6
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 2.1e-39 166.0 98 79.6
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 2.7e-39 165.6 98 79.6
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 2.7e-39 165.6 107 77.6
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 2.7e-39 165.6 107 73.8
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 3.6e-39 165.2 98 77.6
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 3.6e-39 165.2 98 77.6
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 6.1e-39 164.5 98 79.6
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 1.0e-38 163.7 107 72.9
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 1.0e-38 163.7 98 79.6
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-38 163.7 98 79.6
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-38 163.7 98 79.6
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-38 163.7 98 79.6
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-38 163.7 98 79.6
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 1.0e-38 163.7 107 75.7
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 1.4e-38 163.3 98 77.6
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 1.8e-38 162.9 98 76.5
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 1.8e-38 162.9 98 76.5
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 2.3e-38 162.5 98 79.6
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 3.0e-38 162.2 98 76.5
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 3.9e-38 161.8 98 77.6
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 3.9e-38 161.8 98 76.5
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 3.9e-38 161.8 98 78.6
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 5.2e-38 161.4 98 76.5
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 5.2e-38 161.4 98 76.5
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 5.2e-38 161.4 98 76.5
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 5.2e-38 161.4 98 76.5
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 5.2e-38 161.4 98 77.6
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 6.7e-38 161.0 98 79.6
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 6.7e-38 161.0 98 77.6
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 6.7e-38 161.0 98 77.6
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 6.7e-38 161.0 98 76.5
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 8.8e-38 160.6 98 77.6
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 8.8e-38 160.6 98 77.6
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 8.8e-38 160.6 98 76.5
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 1.1e-37 160.2 107 73.8
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 2.0e-37 159.5 98 76.5
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 2.6e-37 159.1 98 76.5
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 2.6e-37 159.1 98 76.5
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 2.6e-37 159.1 98 76.5
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 2.6e-37 159.1 98 75.5
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 2.6e-37 159.1 98 78.6
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 3.3e-37 158.7 98 77.6
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 3.3e-37 158.7 98 77.6
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 5.7e-37 157.9 98 75.5
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 7.4e-37 157.5 98 77.6
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 9.7e-37 157.1 98 76.5
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 9.7e-37 157.1 98 76.5
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 9.7e-37 157.1 98 74.5
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 9.7e-37 157.1 98 77.6
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 1.3e-36 156.8 98 73.5
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 1.3e-36 156.8 98 74.5
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 1.7e-36 156.4 98 76.5
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 1.8e-35 152.9 98 75.5
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 1.8e-35 152.9 98 72.4
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 2.4e-35 152.5 98 77.6
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 3.1e-35 152.1 99 73.7
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 3.1e-35 152.1 99 73.7
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.2e-34 150.2 89 77.5
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 7.7e-34 147.5 98 73.5
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 2.9e-33 145.6 91 73.6
Psat7g242400 Pisum sativum HOM05D004029 ORTHO05D004613 5.5e-32 141.4 98 70.4
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 1.4e-30 136.7 98 67.3
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 2.3e-30 136.0 80 78.8
Rhsim06G0194500 Rhododendron simsii HOM05D004029 ORTHO05D004613 2.3e-30 136.0 80 78.8
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 4.0e-30 135.2 77 81.8
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 5.2e-30 134.8 81 76.5
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 8.8e-30 134.0 98 61.2
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.0e-29 132.9 78 79.5
SEGI_16455 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 2.6e-29 132.5 87 70.1
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 4.4e-29 131.7 78 78.2
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 4.8e-28 128.3 77 77.9
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 5.5e-24 114.8 80 70.0
CBR_g48013 Chara braunii HOM05D004029 ORTHO05D004613 1.5e-21 106.7 123 44.7
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 4.8e-20 101.7 78 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 7.0e-19 97.8 96 49.0
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 4.5e-18 95.1 128 41.4
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.7e-10 69.3 78 47.4


User provided reference genes

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