Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027773 Vanilla planifolia HOM05D004029 ORTHO05D004613 6.4e-51 203.8 101 100.0
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.3e-40 168.7 98 86.7
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.3e-40 168.7 98 86.7
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 2.3e-40 168.7 98 86.7
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 2.3e-40 168.7 98 84.7
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 3.0e-40 168.3 98 85.7
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 5.1e-40 167.5 98 85.7
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 8.7e-40 166.8 98 84.7
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.1e-39 166.4 98 86.7
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.1e-39 166.4 98 85.7
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 1.5e-39 166.0 98 85.7
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 3.3e-39 164.9 98 85.7
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 3.3e-39 164.9 98 83.7
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 3.3e-39 164.9 98 85.7
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 7.4e-39 163.7 98 85.7
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 7.4e-39 163.7 98 85.7
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 7.4e-39 163.7 98 85.7
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 9.6e-39 163.3 98 85.7
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.3e-38 162.9 98 83.7
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 1.3e-38 162.9 99 82.8
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 2.1e-38 162.2 98 83.7
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.8e-38 161.8 98 84.7
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 2.8e-38 161.8 98 84.7
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 2.8e-38 161.8 98 83.7
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 3.7e-38 161.4 98 83.7
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 4.8e-38 161.0 98 83.7
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 4.8e-38 161.0 98 81.6
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 4.8e-38 161.0 98 82.7
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 6.3e-38 160.6 98 83.7
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 8.2e-38 160.2 98 83.7
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 8.2e-38 160.2 98 83.7
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 1.1e-37 159.8 98 82.7
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 1.1e-37 159.8 98 82.7
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 1.1e-37 159.8 98 82.7
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.4e-37 159.5 97 80.4
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.4e-37 159.5 97 80.4
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 1.8e-37 159.1 98 82.7
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.4e-37 158.7 98 82.7
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.4e-37 158.7 98 82.7
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 2.4e-37 158.7 98 81.6
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 2.4e-37 158.7 98 81.6
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 3.1e-37 158.3 98 83.7
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 4.1e-37 157.9 98 80.6
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 4.1e-37 157.9 98 81.6
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 4.1e-37 157.9 98 82.7
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 5.3e-37 157.5 98 81.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 6.9e-37 157.1 98 81.6
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 6.9e-37 157.1 98 79.6
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 6.9e-37 157.1 98 82.7
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 9.0e-37 156.8 98 79.6
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 9.0e-37 156.8 98 80.6
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 1.2e-36 156.4 109 75.2
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 1.2e-36 156.4 98 82.7
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 1.2e-36 156.4 98 80.6
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 81.6
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 82.7
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 79.6
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 79.6
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 79.6
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 79.6
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 82.7
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 1.5e-36 156.0 98 81.6
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 2.0e-36 155.6 98 82.7
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 2.0e-36 155.6 98 80.6
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 2.0e-36 155.6 98 79.6
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 2.6e-36 155.2 98 79.6
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 2.6e-36 155.2 98 79.6
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 3.4e-36 154.8 98 80.6
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 3.4e-36 154.8 98 79.6
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 3.4e-36 154.8 98 79.6
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 4.5e-36 154.5 98 81.6
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 4.5e-36 154.5 98 80.6
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 5.9e-36 154.1 98 81.6
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 5.9e-36 154.1 99 79.8
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 7.6e-36 153.7 98 80.6
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 7.6e-36 153.7 98 79.6
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 1.0e-35 153.3 98 81.6
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 1.3e-35 152.9 99 79.8
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 1.7e-35 152.5 98 80.6
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 2.2e-35 152.1 98 79.6
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 2.2e-35 152.1 98 75.5
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 2.9e-35 151.8 98 78.6
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 2.9e-35 151.8 98 80.6
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 2.9e-35 151.8 99 78.8
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 2.9e-35 151.8 98 79.6
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 5.0e-35 151.0 98 77.6
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 8.4e-35 150.2 98 78.6
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 8.4e-35 150.2 98 78.6
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 8.4e-35 150.2 98 78.6
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 8.4e-35 150.2 98 78.6
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 1.4e-34 149.4 98 78.6
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 2.5e-34 148.7 98 77.6
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 2.5e-34 148.7 98 77.6
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 3.2e-34 148.3 98 76.5
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 4.2e-34 147.9 98 77.6
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 4.2e-34 147.9 98 77.6
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 4.2e-34 147.9 98 75.5
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 5.5e-34 147.5 99 77.8
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 7.2e-34 147.1 93 81.7
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 7.2e-34 147.1 98 77.6
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 7.2e-34 147.1 98 77.6
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 7.2e-34 147.1 98 77.6
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.3e-32 142.9 84 83.3
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 1.8e-32 142.5 90 82.2
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 1.5e-31 139.4 97 72.2
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 3.3e-31 138.3 93 76.3
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 3.3e-31 138.3 86 77.9
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 7.4e-31 137.1 98 71.4
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 2.8e-30 135.2 98 69.4
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 5.3e-29 131.0 97 67.0
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 1.8e-24 115.9 71 80.3
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 7.4e-23 110.5 99 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 1.4e-21 106.3 99 56.6
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 2.4e-21 105.5 65 83.1
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 2.6e-20 102.1 114 52.6
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 3.4e-20 101.7 99 57.6
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 5.9e-20 100.9 79 67.1
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.2e-18 95.1 63 77.8
SEGI_37124 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 3.7e-14 81.6 63 63.5
Lsat_1_v5_gn_4_161921 Lactuca sativa HOM05D004029 ORTHO05D004613 5.0e-11 71.2 92 42.4
Lsat_1_v5_gn_8_148540 Lactuca sativa HOM05D004029 ORTHO05D004613 1.6e-09 66.2 68 51.5
MBI16_g04070_MAGBIO Magnolia biondii HOM05D005084 ORTHO05D006254 2.0e-07 59.3 30 90.0
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 4.4e-07 58.2 30 86.7


User provided reference genes

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