Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.2e-189 664.8 318 100.0
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 4.2e-181 637.9 319 96.2
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 4.6e-95 352.1 269 64.7
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.3e-94 350.5 296 59.8
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 5.1e-94 348.6 321 56.7
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 6.7e-94 348.2 229 71.6
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.9e-93 346.7 291 60.8
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.9e-93 346.7 326 54.3
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.5e-93 346.3 291 60.8
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.5e-93 346.3 291 60.5
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 5.6e-93 345.1 308 58.1
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 9.6e-93 344.4 284 59.9
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 2.1e-92 343.2 211 75.4
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.8e-92 342.8 272 62.9
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 3.7e-92 342.4 286 59.1
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.1e-91 340.9 261 64.4
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.1e-91 340.9 213 74.6
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.8e-91 340.1 296 60.1
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 4.0e-91 339.0 286 59.4
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 5.3e-91 338.6 223 71.7
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 6.9e-91 338.2 307 55.7
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.2e-90 337.4 210 74.8
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.0e-90 336.7 206 75.2
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 2.0e-90 336.7 210 74.8
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 4.5e-90 335.5 305 57.4
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 7.6e-90 334.7 213 72.3
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 7.6e-90 334.7 276 59.8
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 7.6e-90 334.7 242 66.9
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 2.2e-89 333.2 233 67.0
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 2.9e-89 332.8 216 73.6
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 2.9e-89 332.8 216 72.7
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 2.9e-89 332.8 233 68.7
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 3.8e-89 332.4 211 72.5
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 4.9e-89 332.0 201 76.1
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 8.4e-89 331.3 221 71.5
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 8.4e-89 331.3 285 60.0
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 1.1e-88 330.9 309 56.3
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 1.4e-88 330.5 277 59.2
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 1.9e-88 330.1 230 68.3
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 1.9e-88 330.1 210 73.8
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 2.4e-88 329.7 226 68.1
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 2.4e-88 329.7 226 68.1
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.4e-88 329.7 309 54.7
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 2.4e-88 329.7 211 73.9
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 3.2e-88 329.3 300 56.0
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 3.2e-88 329.3 237 65.8
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 5.5e-88 328.6 280 60.7
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 7.1e-88 328.2 213 70.9
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 9.3e-88 327.8 226 67.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 9.3e-88 327.8 270 60.0
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 9.3e-88 327.8 208 73.6
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 9.3e-88 327.8 201 74.6
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 1.2e-87 327.4 230 67.0
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.2e-87 327.4 206 74.3
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.2e-87 327.4 221 70.6
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 1.6e-87 327.0 221 70.6
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.6e-87 327.0 211 71.6
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.6e-87 327.0 211 71.6
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 2.1e-87 326.6 211 72.0
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.1e-87 326.6 210 74.3
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.7e-87 326.2 267 61.0
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 3.5e-87 325.9 294 55.4
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 3.5e-87 325.9 237 66.7
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 4.6e-87 325.5 221 69.2
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 6.0e-87 325.1 231 66.7
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 7.9e-87 324.7 199 74.9
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 7.9e-87 324.7 199 74.9
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 7.9e-87 324.7 199 74.9
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.0e-86 324.3 269 60.2
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 1.0e-86 324.3 269 60.2
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 1.0e-86 324.3 213 70.0
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 1.0e-86 324.3 218 70.6
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 1.0e-86 324.3 199 75.4
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.3e-86 323.9 223 69.5
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.3e-86 323.9 211 71.1
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.3e-86 323.9 221 69.2
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.8e-86 323.6 231 67.1
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.8e-86 323.6 231 67.1
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.8e-86 323.6 199 74.9
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.8e-86 323.6 208 70.7
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 2.3e-86 323.2 199 75.4
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 2.3e-86 323.2 293 56.7
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 3.9e-86 322.4 292 57.2
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 8.7e-86 321.2 221 69.2
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 8.7e-86 321.2 218 67.9
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.5e-85 320.5 210 71.9
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 1.5e-85 320.5 221 69.2
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.5e-85 319.7 209 69.9
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 2.5e-85 319.7 198 75.3
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.5e-85 319.7 212 70.8
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 3.3e-85 319.3 210 69.5
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 3.3e-85 319.3 269 59.5
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 3.3e-85 319.3 213 68.5
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 4.3e-85 318.9 210 71.0
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 4.3e-85 318.9 208 69.7
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 5.6e-85 318.5 237 63.7
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 5.6e-85 318.5 209 70.3
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.4e-85 318.2 209 70.8
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 1.3e-84 317.4 229 65.9
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.6e-84 317.0 233 64.4
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 2.8e-84 316.2 210 70.5
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 3.7e-84 315.8 274 58.4
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 4.8e-84 315.5 209 69.4
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 6.2e-84 315.1 188 77.1
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 8.2e-84 314.7 190 75.8
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 6.9e-83 311.6 267 60.3
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 9.0e-83 311.2 220 67.7
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.2e-82 310.8 198 73.7
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.4e-82 309.3 209 67.9
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 4.5e-82 308.9 229 65.1
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.3e-81 307.4 198 71.2
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 4.9e-81 305.4 243 61.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.1e-80 304.3 341 49.6
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 1.9e-80 303.5 204 70.1
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 9.3e-80 301.2 188 73.4
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 2.2e-76 290.0 230 60.4
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.4e-75 287.3 203 62.6
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 7.7e-74 281.6 207 59.9
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 8.5e-73 278.1 276 54.0
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 5.1e-70 268.9 195 63.6
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 3.4e-66 256.1 161 70.2
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 3.2e-64 249.6 238 54.6
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.2e-63 247.7 159 69.8
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.7e-63 246.5 175 68.6
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.9e-62 242.7 156 70.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 3.7e-60 236.1 210 55.2
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 1.2e-58 231.1 148 68.9
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.9e-56 223.8 136 75.7
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 2.1e-55 220.3 138 73.2
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 5.9e-50 202.2 119 73.9
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 1.7e-44 184.1 148 62.8
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 3.2e-40 169.9 169 47.3
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 4.2e-40 169.5 153 53.6
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 4.7e-31 139.4 136 51.5
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 3.1e-22 110.2 83 56.6
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 2.7e-18 97.1 82 58.5
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 5.6e-16 89.4 75 61.3
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 8.0e-15 85.5 162 35.8
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 2.6e-13 80.5 57 66.7
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 2.2e-12 77.4 44 81.8
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 2.9e-12 77.0 71 57.7
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 3.7e-12 76.6 81 49.4
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.1e-11 75.1 64 65.6


User provided reference genes

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