Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.5e-121 438.0 223 100.0
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.8e-77 293.1 245 70.6
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 9.2e-66 254.2 186 63.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.7e-64 250.0 189 63.5
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 1.5e-63 246.9 221 57.9
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 3.3e-63 245.7 225 58.2
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.5e-63 244.2 166 69.3
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.5e-63 244.2 166 69.3
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.2e-62 243.8 160 78.1
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 1.2e-62 243.8 185 63.8
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 2.8e-62 242.7 219 56.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 3.6e-62 242.3 177 66.1
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 4.7e-62 241.9 170 67.1
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 8.0e-62 241.1 193 61.7
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 1.4e-61 240.4 187 62.6
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 1.2e-60 237.3 187 60.4
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 3.4e-60 235.7 221 54.8
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 3.4e-60 235.7 223 56.1
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 3.4e-60 235.7 219 56.2
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 4.4e-60 235.3 221 54.3
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 5.8e-60 235.0 221 57.5
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 7.5e-60 234.6 224 54.5
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 7.5e-60 234.6 199 57.8
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 9.8e-60 234.2 160 67.5
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.3e-59 233.8 222 55.9
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.7e-59 233.4 167 65.9
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 3.7e-59 232.3 222 54.5
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 4.9e-59 231.9 222 55.4
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 4.9e-59 231.9 214 55.6
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 8.3e-59 231.1 168 65.5
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.1e-58 230.7 222 54.5
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.1e-58 230.7 221 52.0
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 1.4e-58 230.3 170 62.9
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.4e-58 230.3 221 51.6
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.9e-58 229.9 222 55.0
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.4e-58 229.6 180 58.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 9.2e-58 227.6 190 58.4
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 9.2e-58 227.6 166 62.7
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 9.2e-58 227.6 221 51.6
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.6e-57 226.9 221 50.7
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.0e-57 226.5 171 60.8
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 2.7e-57 226.1 190 57.4
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 2.7e-57 226.1 221 52.0
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 4.6e-57 225.3 220 55.0
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 4.6e-57 225.3 191 56.0
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 4.6e-57 225.3 167 65.3
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 4.6e-57 225.3 226 51.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 6.0e-57 224.9 190 57.9
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 7.8e-57 224.6 211 53.6
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 7.8e-57 224.6 223 54.3
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 1.0e-56 224.2 192 57.8
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 1.0e-56 224.2 204 52.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.7e-56 223.4 160 65.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.7e-56 223.4 190 55.8
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 2.3e-56 223.0 224 52.7
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 3.0e-56 222.6 223 51.6
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 3.0e-56 222.6 224 52.7
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.0e-56 222.6 166 61.4
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 3.0e-56 222.6 190 56.8
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 3.9e-56 222.2 224 52.2
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 5.0e-56 221.9 162 62.3
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 5.0e-56 221.9 188 57.4
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 6.6e-56 221.5 183 59.0
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 6.6e-56 221.5 224 52.7
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 8.6e-56 221.1 160 62.5
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.6e-56 221.1 160 62.5
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 8.6e-56 221.1 160 62.5
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.5e-55 220.3 222 52.3
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.5e-55 220.3 219 52.1
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.5e-55 219.5 164 61.6
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 5.6e-55 218.4 168 60.1
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 3.6e-54 215.7 221 50.7
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.1e-53 214.2 226 53.1
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 1.4e-53 213.8 164 60.4
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.0e-53 212.2 226 52.2
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 6.8e-53 211.5 209 51.2
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 1.5e-52 210.3 176 57.4
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.0e-52 209.9 176 56.8
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.4e-52 209.1 138 71.0
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 9.8e-52 207.6 183 55.2
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 9.8e-52 207.6 230 50.4
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.3e-51 207.2 169 59.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 4.9e-51 205.3 170 55.3
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.4e-50 203.8 235 48.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 1.9e-50 203.4 223 51.6
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.2e-49 200.7 252 45.6
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 2.3e-48 196.4 147 64.6
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 5.1e-48 195.3 216 48.1
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 2.5e-47 193.0 128 71.1
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.2e-46 190.7 223 48.4
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.8e-45 186.8 127 65.4
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.7e-43 180.3 127 64.6
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 6.4e-43 178.3 207 46.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.4e-42 177.2 210 46.7
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.7e-41 172.9 224 45.5
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.3e-39 165.6 173 49.7
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 4.3e-39 165.6 173 49.7
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.6e-38 163.7 127 64.6
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.4e-36 155.6 342 33.6
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 1.3e-35 154.1 138 54.3
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 3.2e-34 149.4 128 55.5
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 4.2e-34 149.1 125 63.2
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.6e-30 137.1 173 42.8
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 2.1e-30 136.7 153 51.6
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.0e-29 131.3 132 50.8
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 3.4e-28 129.4 96 64.6
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 7.1e-18 95.1 80 55.0
HPP92_027580 Vanilla planifolia HOM05D004646 ORTHO05D005829 1.5e-15 87.4 62 79.0
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 8.1e-14 81.6 52 71.2


User provided reference genes

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