Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027576 Vanilla planifolia HOM05D004878 ORTHO05D029142 9.0e-60 233.4 120 100.0
HPP92_028557 Vanilla planifolia HOM05D004878 ORTHO05D006497 1.3e-13 80.1 56 78.6
Lsat_1_v5_gn_5_36260 Lactuca sativa HOM05D004878 ORTHO05D006497 5.9e-11 71.2 56 67.9
Hund02535 Selenicereus undatus HOM05D004878 ORTHO05D006497 1.0e-10 70.5 56 67.9
SGA_v2.0_scaffold175G39366 Striga asiatica HOM05D004878 ORTHO05D006497 1.0e-10 70.5 57 66.7
GSVIVG01012083001 Vitis vinifera HOM05D004878 ORTHO05D006497 1.0e-10 70.5 56 69.6
DCAR_003786 Daucus carota HOM05D004878 ORTHO05D006497 1.3e-10 70.1 63 63.5
Lj6g0027572 Lotus japonicus HOM05D004878 ORTHO05D006497 1.3e-10 70.1 63 63.5
vmacro03511 Vaccinium macrocarpon HOM05D004878 ORTHO05D006497 1.3e-10 70.1 56 67.9
VMungo1309G2006 Vigna mungo HOM05D004878 ORTHO05D006497 1.3e-10 70.1 56 67.9
MBI01_g44876_MAGBIO Magnolia biondii HOM05D004878 ORTHO05D006497 1.7e-10 69.7 56 69.6
Cfa000720 Carpinus fangiana HOM05D004878 ORTHO05D006497 2.3e-10 69.3 56 66.1
MELO3C025560.2 Cucumis melo HOM05D004878 ORTHO05D006497 2.3e-10 69.3 56 67.9
Rhsim13G0131200 Rhododendron simsii HOM05D004878 ORTHO05D006497 2.3e-10 69.3 56 66.1
Sc10g0005320 Simmondsia chinensis HOM05D004878 ORTHO05D006497 2.3e-10 69.3 56 66.1
MSTRG.16341 Avicennia marina HOM05D004878 ORTHO05D006497 2.9e-10 68.9 56 62.5
Cc09_g06230 Coffea canephora HOM05D004878 ORTHO05D006497 2.9e-10 68.9 57 64.9
PSO675G2265 Papaver somniferum HOM05D004878 ORTHO05D006497 2.9e-10 68.9 56 66.1
Phvul.009G205700 Phaseolus vulgaris HOM05D004878 ORTHO05D006497 2.9e-10 68.9 56 66.1
QL11p017966 Quercus lobata HOM05D004878 ORTHO05D006497 2.9e-10 68.9 56 66.1
CiPaw.09G078300 Carya illinoinensis HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 67.9
ClCG01G010320 Citrullus lanatus HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
Thhalv10007962m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
Manes.16G059325 Manihot esculenta HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
PSO675G3235 Papaver somniferum HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
Potri.012G120492 Populus trichocarpa HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
Sp1g27010 Schrenkiella parvula HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
TWI63G1027 Tripterygium wilfordii HOM05D004878 ORTHO05D006497 3.8e-10 68.6 64 59.4
Zm00001eb207300 Zea mays HOM05D004878 ORTHO05D006497 3.8e-10 68.6 56 66.1
AUR62032164 Chenopodium quinoa HOM05D004878 ORTHO05D006497 5.0e-10 68.2 63 60.3
AUR62036922 Chenopodium quinoa HOM05D004878 ORTHO05D006497 5.0e-10 68.2 56 64.3
CsaV3_1G017150 Cucumis sativus L. HOM05D004878 ORTHO05D006497 5.0e-10 68.2 56 66.1
Thhalv10009483m.g Eutrema salsugineum HOM05D004878 ORTHO05D006497 5.0e-10 68.2 56 66.1
Nn7g38129 Nelumbo nucifera HOM05D004878 ORTHO05D006497 5.0e-10 68.2 56 66.1
Aa31LG2G15140 Aethionema arabicum HOM05D004878 ORTHO05D006497 6.6e-10 67.8 64 57.8
Cpa.g.sc135.17 Carica papaya HOM05D004878 ORTHO05D006497 6.6e-10 67.8 56 64.3
Migut.M01973 Erythranthe guttata HOM05D004878 ORTHO05D006497 6.6e-10 67.8 56 64.3
Eucgr.E01881 Eucalyptus grandis HOM05D004878 ORTHO05D006497 6.6e-10 67.8 56 66.1
Medtr0151s0030 Medicago truncatula HOM05D004878 ORTHO05D006497 6.6e-10 67.8 63 60.3
Prupe.4G110600 Prunus persica HOM05D004878 ORTHO05D006497 6.6e-10 67.8 56 66.1
Sed0019791 Sechium edule HOM05D004878 ORTHO05D006497 6.6e-10 67.8 56 66.1
Actinidia33655 Actinidia chinensis HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 64.3
CANSAT35G1110 Cannabis sativa HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 66.1
ECA246G0899 Erigeron canadensis HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 64.3
Glyma.06G218300 Glycine max HOM05D004878 ORTHO05D006497 8.6e-10 67.4 63 60.3
Gohir.D05G147200 Gossypium hirsutum HOM05D004878 ORTHO05D006497 8.6e-10 67.4 64 59.4
Gohir.D05G147300 Gossypium hirsutum HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 66.1
Gorai.009G151200 Gossypium raimondii HOM05D004878 ORTHO05D006497 8.6e-10 67.4 64 59.4
Gorai.009G151300 Gossypium raimondii HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 66.1
HanXRQChr12g0378221 Helianthus annuus HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 66.1
MD10G1234100 Malus domestica HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 66.1
Sabra12G0088600 Salix brachista HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 64.3
Sabra12G0091900 Salix brachista HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 64.3
Thecc.06G141500 Theobroma cacao HOM05D004878 ORTHO05D006497 8.6e-10 67.4 56 64.3
AL1G49290 Arabidopsis lyrata HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
AT1G31190 Arabidopsis thaliana HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
BcaB07g32781 Brassica carinata HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
BcaC09g51576 Brassica carinata HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
A09p35050 Brassica napus HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
BolC1t01152H Brassica oleracea HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
Carub.0001s2959 Capsella rubella HOM05D004878 ORTHO05D006497 1.1e-09 67.0 56 64.3
Aqoxy3G04145 Aquilegia oxysepala HOM05D004878 ORTHO05D006497 1.5e-09 66.6 56 66.1
Lalb_Chr11g0072281 Lupinus albus HOM05D004878 ORTHO05D006497 1.5e-09 66.6 63 60.3
arahy.Tifrunner.gnm1.ann1.RY21T0 Arachis hypogaea HOM05D004878 ORTHO05D006497 1.9e-09 66.2 63 58.7
CDE05G2830 Ceratophyllum demersum HOM05D004878 ORTHO05D006497 1.9e-09 66.2 63 61.9
COL.COLO4_30984 Corchorus olitorius HOM05D004878 ORTHO05D006497 1.9e-09 66.2 56 66.1
Os02g0169900 Oryza sativa ssp. japonica HOM05D004878 ORTHO05D006497 1.9e-09 66.2 55 67.3
ATR0763G188 Amborella trichopoda HOM05D004878 ORTHO05D006497 2.5e-09 65.9 64 59.4
BcaC05g27149 Brassica carinata HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 62.5
C05p30360 Brassica napus HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 62.5
BolC5t31775H Brassica oleracea HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 62.5
CAN.G519.8 Capsicum annuum HOM05D004878 ORTHO05D006497 2.5e-09 65.9 64 59.4
Duzib235G0192 Durio zibethinus HOM05D004878 ORTHO05D006497 2.5e-09 65.9 63 58.7
Gohir.A05G144900 Gossypium hirsutum HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 64.3
Lj1A1144T48 Lonicera japonica HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 64.3
Psat1g023920 Pisum sativum HOM05D004878 ORTHO05D006497 2.5e-09 65.9 63 58.7
Potri.015G120400 Populus trichocarpa HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 64.3
SalBow8G2261 Salvia bowleyana HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 60.7
SalBow8G4975 Salvia bowleyana HOM05D004878 ORTHO05D006497 2.5e-09 65.9 56 60.7
PGR042G0940 Punica granatum HOM05D004878 ORTHO05D006497 3.3e-09 65.5 71 53.5
RcHm_v2.0_Chr5g0019961 Rosa chinensis HOM05D004878 ORTHO05D006497 3.3e-09 65.5 56 64.3
Solyc02g069010.4 Solanum lycopersicum HOM05D004878 ORTHO05D006497 3.3e-09 65.5 64 59.4
Sopen02g018080 Solanum pennellii HOM05D004878 ORTHO05D006497 3.3e-09 65.5 64 59.4
THA.LOC104798550 Tarenaya hassleriana HOM05D004878 ORTHO05D006497 3.3e-09 65.5 56 64.3
TPR.G9524 Trifolium pratense HOM05D004878 ORTHO05D006497 3.3e-09 65.5 63 58.7
Atru.chr10.492 Acer truncatum HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 62.5
BraA09t39036Z Brassica rapa HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 62.5
Ca_04469_v3 Cicer arietinum L. HOM05D004878 ORTHO05D006497 4.2e-09 65.1 63 58.7
Ciclev10015670m.g Citrus clementina HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 62.5
FvH4_3g12170 Fragaria vesca HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 64.3
FAN16G2586 Fragaria x ananassa HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 64.3
FAN21G2052 Fragaria x ananassa HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 64.3
FAN25G2275 Fragaria x ananassa HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 64.3
Peaxi162Scf00149g00811 Petunia axillaris HOM05D004878 ORTHO05D006497 4.2e-09 65.1 56 66.1
CARHR030660 Cardamine hirsuta HOM05D004878 ORTHO05D006497 7.2e-09 64.3 56 62.5
EL10Ac5g11219 Beta vulgaris HOM05D004878 ORTHO05D006497 9.5e-09 63.9 63 58.7
MD05G1253100 Malus domestica HOM05D004878 ORTHO05D006497 9.5e-09 63.9 55 63.6
unitig_27.g24819 Utricularia gibba HOM05D004878 ORTHO05D006497 9.5e-09 63.9 56 64.3
arahy.Tifrunner.gnm1.ann1.6I23D0 Arachis hypogaea HOM05D004878 ORTHO05D006497 1.6e-08 63.2 53 62.3
Nitab4.5_0002056g0080 Nicotiana tabacum HOM05D004878 ORTHO05D006497 2.1e-08 62.8 54 64.8
CSS0029949 Camellia sinensis var. sinensis HOM05D004878 ORTHO05D006497 2.8e-08 62.4 56 62.5
TAR624G0003 Trochodendron aralioides HOM05D004878 ORTHO05D006497 2.8e-08 62.4 33 87.9
Haze_06030 Corylus avellana HOM05D004878 ORTHO05D029142 8.0e-08 60.8 33 81.8
Mapoly0024s0023 Marchantia polymorpha HOM05D004878 ORTHO05D006497 1.5e-06 56.6 63 57.1
Pp3c21_18140 Physcomitrium patens HOM05D004878 ORTHO05D006497 3.4e-06 55.5 57 52.6


User provided reference genes

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