Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.2e-95 353.2 178 100.0
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 6.2e-81 304.3 159 98.1
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 8.1e-57 224.2 149 71.1
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 9.0e-56 220.7 160 64.4
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 3.4e-55 218.8 153 69.9
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 3.4e-55 218.8 162 67.9
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 5.8e-55 218.0 153 68.6
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 9.9e-55 217.2 157 69.4
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.7e-54 216.5 154 68.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.9e-54 215.7 153 69.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.8e-54 215.3 157 68.2
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 4.9e-54 214.9 160 63.8
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 8.4e-54 214.2 152 68.4
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.1e-53 213.8 151 69.5
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 1.1e-53 213.8 152 67.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.4e-53 213.4 152 67.1
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 1.9e-53 213.0 152 68.4
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.2e-53 212.2 149 70.5
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.2e-53 212.2 149 70.5
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.2e-53 211.8 152 67.1
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 7.1e-53 211.1 145 69.7
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.2e-52 210.3 160 62.5
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.2e-52 210.3 152 67.1
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.6e-52 209.9 152 67.8
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.6e-52 209.9 150 70.7
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.6e-52 209.9 153 66.7
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.7e-52 209.1 166 66.3
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 2.7e-52 209.1 152 65.8
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 3.5e-52 208.8 153 68.0
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 3.5e-52 208.8 152 66.4
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 4.6e-52 208.4 149 68.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 6.0e-52 208.0 176 58.5
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 6.0e-52 208.0 152 65.8
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.0e-52 208.0 152 65.8
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 6.0e-52 208.0 157 66.2
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.0e-51 207.2 152 65.1
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.0e-51 207.2 152 65.1
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.3e-51 206.8 153 63.4
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 1.8e-51 206.5 149 67.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.3e-51 206.1 154 65.6
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.3e-51 206.1 158 65.8
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 3.9e-51 205.3 143 69.2
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 3.9e-51 205.3 153 63.4
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 3.9e-51 205.3 151 66.9
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.9e-51 205.3 152 66.4
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.1e-51 204.9 164 63.4
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 5.1e-51 204.9 152 64.5
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 6.7e-51 204.5 151 67.5
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 8.7e-51 204.1 117 79.5
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 8.7e-51 204.1 145 67.6
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 8.7e-51 204.1 150 64.7
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 8.7e-51 204.1 153 67.3
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 1.1e-50 203.8 115 84.3
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.1e-50 203.8 164 62.8
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 1.5e-50 203.4 149 65.1
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.5e-50 203.4 151 64.9
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.5e-50 203.4 151 64.2
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.5e-50 203.4 175 60.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.5e-50 203.4 151 66.9
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.9e-50 203.0 151 64.2
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.9e-50 203.0 148 66.2
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.5e-50 202.6 151 64.9
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.5e-50 202.6 145 66.9
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 3.3e-50 202.2 154 64.9
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 3.3e-50 202.2 151 64.9
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.3e-50 202.2 145 66.2
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 3.3e-50 202.2 146 66.4
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 3.3e-50 202.2 144 69.4
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.3e-50 201.8 158 62.0
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 4.3e-50 201.8 175 59.4
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 4.3e-50 201.8 175 59.4
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 4.3e-50 201.8 143 67.8
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 5.6e-50 201.4 144 68.8
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 9.6e-50 200.7 159 62.3
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 9.6e-50 200.7 172 59.9
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.3e-49 200.3 116 81.0
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.3e-49 200.3 155 65.8
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.6e-49 199.9 148 64.9
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 2.8e-49 199.1 160 61.2
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 6.2e-49 198.0 132 70.5
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 8.1e-49 197.6 152 63.8
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.1e-48 197.2 157 63.7
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.1e-48 197.2 115 80.0
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.1e-48 197.2 148 64.2
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.4e-48 196.8 160 59.4
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 1.8e-48 196.4 163 60.7
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.8e-48 196.4 151 62.3
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.8e-48 196.4 144 66.0
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.4e-48 196.1 159 60.4
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 3.1e-48 195.7 151 63.6
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 4.0e-48 195.3 157 63.1
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 5.3e-48 194.9 159 60.4
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 9.0e-48 194.1 160 60.6
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 9.0e-48 194.1 115 79.1
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.2e-47 193.7 170 58.8
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.0e-47 193.0 159 59.7
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 2.6e-47 192.6 162 58.6
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 3.4e-47 192.2 159 59.7
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 3.4e-47 192.2 152 63.2
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 3.4e-47 192.2 116 77.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 5.8e-47 191.4 161 58.4
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 7.6e-47 191.0 165 57.0
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 7.6e-47 191.0 118 73.7
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 2.2e-46 189.5 159 60.4
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 2.2e-46 189.5 159 58.5
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 3.8e-46 188.7 116 73.3
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 3.8e-46 188.7 116 73.3
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.1e-45 187.2 116 72.4
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 2.4e-45 186.0 139 66.2
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 4.6e-44 181.8 152 60.5
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 7.9e-44 181.0 136 66.2
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.8e-43 179.9 153 58.8
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.7e-41 172.2 110 70.0
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.7e-41 172.2 137 58.4
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 6.9e-40 167.9 115 67.8
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.3e-38 163.7 137 54.7
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 7.4e-34 147.9 110 57.3
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.1e-32 144.1 111 64.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 6.9e-32 141.4 160 52.5
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.0e-31 139.8 108 56.5
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.2e-30 136.3 106 55.7
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.1e-29 134.0 107 53.3
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 5.5e-21 105.1 59 78.0
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 5.5e-21 105.1 59 78.0
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 6.7e-19 98.2 107 50.5
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.3e-17 91.7 65 64.6
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.0e-15 86.7 75 54.7
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 5.9e-15 85.1 54 74.1
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 1.7e-14 83.6 72 55.6


User provided reference genes

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