Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027156 Vanilla planifolia HOM05D000906 ORTHO05D000713 1.3e-47 192.6 91 100.0
HPP92_024172 Vanilla planifolia HOM05D000906 ORTHO05D000713 4.5e-19 97.8 89 61.8
Os02g0286200 Oryza sativa ssp. japonica HOM05D000906 ORTHO05D000713 9.4e-09 63.5 55 54.5
HPP92_027382 Vanilla planifolia HOM05D000906 ORTHO05D000713 1.6e-08 62.8 55 50.9
MBI06_g08482_MAGBIO Magnolia biondii HOM05D000906 ORTHO05D000713 2.1e-08 62.4 56 53.6
Cfa011990 Carpinus fangiana HOM05D000906 ORTHO05D000713 3.6e-08 61.6 54 55.6
Dinv29287 Davidia involucrata HOM05D000906 ORTHO05D000713 4.7e-08 61.2 55 52.7
Dinv35329 Davidia involucrata HOM05D000906 ORTHO05D000713 7.9e-08 60.5 56 50.0
FAN18G3858 Fragaria x ananassa HOM05D000906 ORTHO05D000713 7.9e-08 60.5 56 51.8
FvH4_5g04751 Fragaria vesca HOM05D000906 ORTHO05D000713 1.4e-07 59.7 56 51.8
FAN08G3409 Fragaria x ananassa HOM05D000331 ORTHO05D000732 1.4e-07 59.7 56 51.8
FAN13G1267 Fragaria x ananassa HOM05D000331 ORTHO05D000713 1.4e-07 59.7 56 51.8
Manes.01G049800 Manihot esculenta HOM05D000906 ORTHO05D000713 1.4e-07 59.7 55 49.1
CANSAT21G1627 Cannabis sativa HOM05D000906 ORTHO05D000713 1.8e-07 59.3 56 50.0
FAN18G4289 Fragaria x ananassa HOM05D000331 ORTHO05D000732 1.8e-07 59.3 56 51.8
Potri.003G141100 Populus trichocarpa HOM05D000906 ORTHO05D000713 1.8e-07 59.3 76 43.4
C04p44460 Brassica napus HOM05D000906 ORTHO05D000713 2.3e-07 58.9 59 50.8
TAR636G3694 Trochodendron aralioides HOM05D000906 ORTHO05D000713 2.3e-07 58.9 55 50.9
RcHm_v2.0_Chr7g0194511 Rosa chinensis HOM05D000906 ORTHO05D000713 3.0e-07 58.5 56 50.0
Sabra01G0066700 Salix brachista HOM05D000906 ORTHO05D000713 3.0e-07 58.5 55 50.9
TWI60G0162 Tripterygium wilfordii HOM05D000906 ORTHO05D000713 3.0e-07 58.5 76 46.1
Potri.001G090500 Populus trichocarpa HOM05D000906 ORTHO05D000713 5.1e-07 57.8 55 50.9
Sabra03G0101600 Salix brachista HOM05D000906 ORTHO05D000713 5.1e-07 57.8 76 42.1
TAR636G1562 Trochodendron aralioides HOM05D000906 ORTHO05D000713 5.1e-07 57.8 55 49.1
BcaC02g09588 Brassica carinata HOM05D000906 ORTHO05D000713 6.7e-07 57.4 59 49.2
TAR375G0072 Trochodendron aralioides HOM05D000906 ORTHO05D000713 6.7e-07 57.4 55 50.9
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 8.8e-07 57.0 60 43.3
GSVIVG01019548001 Vitis vinifera HOM05D000906 ORTHO05D000713 8.8e-07 57.0 65 46.2
Gohir.A12G237100 Gossypium hirsutum HOM05D000906 ORTHO05D000713 1.1e-06 56.6 56 46.4
Gorai.008G255200 Gossypium raimondii HOM05D000906 ORTHO05D000713 1.1e-06 56.6 56 46.4
MD06G1108800 Malus domestica HOM05D000906 ORTHO05D000713 1.1e-06 56.6 55 49.1
MD14G1129700 Malus domestica HOM05D000906 ORTHO05D000713 1.1e-06 56.6 55 49.1
Prupe.5G121600 Prunus persica HOM05D000906 ORTHO05D000713 1.1e-06 56.6 55 50.9
Thecc.03G299300 Theobroma cacao HOM05D000906 ORTHO05D000713 1.1e-06 56.6 56 48.2
Zm00001eb203780 Zea mays HOM05D000906 ORTHO05D000713 1.1e-06 56.6 55 47.3
BolC4t26016H Brassica oleracea HOM05D000906 ORTHO05D000713 1.5e-06 56.2 57 49.1
CiPaw.11G119900 Carya illinoinensis HOM05D000906 ORTHO05D000713 1.5e-06 56.2 54 50.0
TPR.G25609 Trifolium pratense HOM05D000906 ORTHO05D000713 1.5e-06 56.2 57 47.4
Aqoxy7G00088 Aquilegia oxysepala HOM05D000906 ORTHO05D000713 2.0e-06 55.8 76 43.4
BcaB06g27103 Brassica carinata HOM05D000906 ORTHO05D000713 2.6e-06 55.5 58 46.6
Duzib205G0550 Durio zibethinus HOM05D000906 ORTHO05D000713 2.6e-06 55.5 55 50.9
Thhalv10027806m.g Eutrema salsugineum HOM05D000906 ORTHO05D000713 2.6e-06 55.5 59 49.2
Gorai.012G002700 Gossypium raimondii HOM05D000906 ORTHO05D000713 2.6e-06 55.5 58 51.7
Hma1.2p1_1188F.1_g265310 Hydrangea macrophylla HOM05D000906 ORTHO05D000713 2.6e-06 55.5 55 49.1
Lj3P905T5 Lonicera japonica HOM05D000906 ORTHO05D000713 2.6e-06 55.5 56 46.4
PSO170G5849 Papaver somniferum HOM05D000906 ORTHO05D000713 2.6e-06 55.5 58 51.7
Prupe.5G121400 Prunus persica HOM05D000906 ORTHO05D000713 2.6e-06 55.5 55 54.5
TPR.G13536 Trifolium pratense HOM05D000906 ORTHO05D000713 2.6e-06 55.5 65 40.0
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 2.6e-06 55.5 55 47.3
Duzib068G1046 Durio zibethinus HOM05D000906 ORTHO05D000713 3.3e-06 55.1 56 46.4
Gohir.D12G238101 Gossypium hirsutum HOM05D000906 ORTHO05D000713 3.3e-06 55.1 56 44.6
Gohir.D12G238300 Gossypium hirsutum HOM05D000906 ORTHO05D000713 3.3e-06 55.1 56 44.6
Medtr5g028370 Medicago truncatula HOM05D000906 ORTHO05D000713 3.3e-06 55.1 54 48.1
TPR.G30171 Trifolium pratense HOM05D000071 ORTHO05D000029 3.3e-06 55.1 76 40.8
A04p10740 Brassica napus HOM05D000906 ORTHO05D000713 4.4e-06 54.7 61 45.9
BraA04t16738Z Brassica rapa HOM05D000906 ORTHO05D000713 4.4e-06 54.7 61 45.9
Ciclev10020881m.g Citrus clementina HOM05D000906 ORTHO05D000713 4.4e-06 54.7 58 48.3
COL.COLO4_10713 Corchorus olitorius HOM05D000331 ORTHO05D000732 4.4e-06 54.7 56 46.4
Gorai.004G247800 Gossypium raimondii HOM05D000906 ORTHO05D000713 4.4e-06 54.7 83 36.1
Rhsim07G0081800 Rhododendron simsii HOM05D000906 ORTHO05D000713 4.4e-06 54.7 65 38.5
Sp7g04520 Schrenkiella parvula HOM05D000906 ORTHO05D000713 4.4e-06 54.7 56 48.2
THA.LOC104809327 Tarenaya hassleriana HOM05D000906 ORTHO05D000713 4.4e-06 54.7 60 50.0
AUR62019850 Chenopodium quinoa HOM05D000906 ORTHO05D000713 5.7e-06 54.3 54 51.9
Duzib177G0980 Durio zibethinus HOM05D000906 ORTHO05D000713 5.7e-06 54.3 63 41.3
Manes.02G009100 Manihot esculenta HOM05D000906 ORTHO05D000713 5.7e-06 54.3 55 45.5
Oeu009967.1 Olea europaea HOM05D000906 ORTHO05D000713 5.7e-06 54.3 56 42.9
TPR.G38010 Trifolium pratense HOM05D000906 ORTHO05D000713 5.7e-06 54.3 49 46.9
arahy.Tifrunner.gnm1.ann1.CI0Z11 Arachis hypogaea HOM05D000906 ORTHO05D000713 7.4e-06 53.9 54 48.1
arahy.Tifrunner.gnm1.ann1.FY4DMZ Arachis hypogaea HOM05D000906 ORTHO05D000713 7.4e-06 53.9 76 42.1
CSS0012151 Camellia sinensis var. sinensis HOM05D000906 ORTHO05D000713 7.4e-06 53.9 55 49.1
CSS0046468 Camellia sinensis var. sinensis HOM05D000906 ORTHO05D000713 7.4e-06 53.9 55 49.1
Gohir.D12G251000 Gossypium hirsutum HOM05D000906 ORTHO05D000713 7.4e-06 53.9 54 51.9
LjContig00312_ERROPOS870357g0026565 Lotus japonicus HOM05D000906 ORTHO05D000713 7.4e-06 53.9 55 49.1
TPR.G17994 Trifolium pratense HOM05D000906 ORTHO05D000713 7.4e-06 53.9 49 46.9
VMungo1215G2633 Vigna mungo HOM05D000906 ORTHO05D000713 7.4e-06 53.9 54 50.0
arahy.Tifrunner.gnm1.ann1.80H951 Arachis hypogaea HOM05D000906 ORTHO05D000713 9.7e-06 53.5 76 42.1
Ca_17477_v3 Cicer arietinum L. HOM05D000906 ORTHO05D000713 9.7e-06 53.5 56 46.4
Migut.F00221 Erythranthe guttata HOM05D000906 ORTHO05D000713 9.7e-06 53.5 55 45.5
Gohir.A05G414500 Gossypium hirsutum HOM05D000906 ORTHO05D000713 9.7e-06 53.5 58 50.0
Gohir.D04G001600 Gossypium hirsutum HOM05D000906 ORTHO05D000713 9.7e-06 53.5 58 50.0
Oeu030288.1 Olea europaea HOM05D000906 ORTHO05D000713 9.7e-06 53.5 61 42.6
Sc01g0010340 Simmondsia chinensis HOM05D000906 ORTHO05D000713 9.7e-06 53.5 54 48.1
Thecc.03G197900 Theobroma cacao HOM05D000906 ORTHO05D000713 9.7e-06 53.5 55 47.3
vmacro06536 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 9.7e-06 53.5 56 46.4


User provided reference genes

Program Settings