Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_027148 Vanilla planifolia HOM05D003963 ORTHO05D004558 1.6e-160 569.3 282 100.0
HPP92_016461 Vanilla planifolia HOM05D003963 ORTHO05D004558 1.5e-110 403.3 206 96.6
CANSAT11G0470 Cannabis sativa HOM05D003963 ORTHO05D004558 4.9e-24 115.9 229 38.4
Potri.003G023300 Populus trichocarpa HOM05D003963 ORTHO05D004558 3.5e-22 109.8 230 40.9
Hma1.2p1_0217F.1_g091740 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 3.9e-21 106.3 222 39.6
Ca_18336_v3 Cicer arietinum L. HOM05D003963 ORTHO05D004558 5.1e-21 105.9 220 35.9
Sabra03G0014700 Salix brachista HOM05D003963 ORTHO05D004558 6.7e-21 105.5 222 37.8
Medtr4g094290 Medicago truncatula HOM05D003963 ORTHO05D004558 8.7e-21 105.1 221 37.6
PSO675G1096 Papaver somniferum HOM05D003963 ORTHO05D004558 1.1e-20 104.8 231 37.2
MBI05_g46461_MAGBIO Magnolia biondii HOM05D003963 ORTHO05D004558 1.9e-20 104.0 262 35.1
PSO541G3622 Papaver somniferum HOM05D003963 ORTHO05D004558 2.5e-20 103.6 230 36.5
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 3.3e-20 103.2 263 33.8
Psat7g097440 Pisum sativum HOM05D003963 ORTHO05D004558 3.3e-20 103.2 221 37.6
Potri.001G206600 Populus trichocarpa HOM05D003963 ORTHO05D004558 3.3e-20 103.2 235 35.7
QL11p019412 Quercus lobata HOM05D003963 ORTHO05D004558 4.3e-20 102.8 230 37.4
TPR.G10467 Trifolium pratense HOM05D003963 ORTHO05D004558 4.3e-20 102.8 220 35.9
Lsat_1_v5_gn_7_80140 Lactuca sativa HOM05D003963 ORTHO05D004558 5.6e-20 102.4 197 39.1
Os04g0458200 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 1.3e-19 101.3 225 35.6
Sabra03G0014600 Salix brachista HOM05D003963 ORTHO05D004558 1.6e-19 100.9 231 38.1
Glyma.08G074900 Glycine max HOM05D003963 ORTHO05D004558 2.1e-19 100.5 255 35.3
RcHm_v2.0_Chr7g0225521 Rosa chinensis HOM05D003963 ORTHO05D004558 3.7e-19 99.8 249 35.7
TWI59G0617 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 3.7e-19 99.8 232 37.9
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 4.8e-19 99.4 227 37.0
Cc02_g21840 Coffea canephora HOM05D003963 ORTHO05D004558 6.2e-19 99.0 242 34.3
MD15G1414300 Malus domestica HOM05D003963 ORTHO05D004558 6.2e-19 99.0 238 37.4
Oeu037196.1 Olea europaea HOM05D003963 ORTHO05D004558 1.1e-18 98.2 244 37.3
Oeu037198.2 Olea europaea HOM05D003963 ORTHO05D004558 1.1e-18 98.2 244 37.3
Thecc.02G143400 Theobroma cacao HOM05D003963 ORTHO05D004558 1.4e-18 97.8 238 37.4
Nitab4.5_0003748g0020 Nicotiana tabacum HOM05D003963 ORTHO05D004558 2.4e-18 97.1 237 35.4
Cfa005579 Carpinus fangiana HOM05D003963 ORTHO05D004558 3.1e-18 96.7 227 36.6
Haze_10775 Corylus avellana HOM05D003963 ORTHO05D004558 3.1e-18 96.7 227 35.7
Nn5g28887 Nelumbo nucifera HOM05D003963 ORTHO05D004558 3.1e-18 96.7 233 35.2
Peaxi162Scf00001g00041 Petunia axillaris HOM05D003963 ORTHO05D004558 3.1e-18 96.7 227 37.9
Peaxi162Scf00001g00043 Petunia axillaris HOM05D003963 ORTHO05D004558 3.1e-18 96.7 227 37.9
CAN.G523.95 Capsicum annuum HOM05D003963 ORTHO05D004558 4.0e-18 96.3 233 37.3
Cpa.g.sc0.13 Carica papaya HOM05D003963 ORTHO05D004558 4.0e-18 96.3 238 35.3
Lj4g0008212 Lotus japonicus HOM05D003963 ORTHO05D004558 4.0e-18 96.3 220 35.0
Peaxi162Scf00003g00367 Petunia axillaris HOM05D003963 ORTHO05D004558 4.0e-18 96.3 231 38.1
Aqoxy6G00464 Aquilegia oxysepala HOM05D003963 ORTHO05D004558 5.3e-18 95.9 237 35.9
Os04g0640900 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 5.3e-18 95.9 262 31.7
TAR381G1468 Trochodendron aralioides HOM05D003963 ORTHO05D004558 6.9e-18 95.5 230 35.7
COL.COLO4_20869 Corchorus olitorius HOM05D003963 ORTHO05D004558 1.2e-17 94.7 227 35.2
FvH4_5g30651 Fragaria vesca HOM05D003963 ORTHO05D004558 1.2e-17 94.7 251 35.5
Glyma.05G120100 Glycine max HOM05D003963 ORTHO05D004558 1.2e-17 94.7 256 34.4
HanXRQChr11g0337121 Helianthus annuus HOM05D003963 ORTHO05D004558 1.2e-17 94.7 200 39.5
vmacro01810 Vaccinium macrocarpon HOM05D003963 ORTHO05D004558 1.5e-17 94.4 223 34.5
ECA236G3037 Erigeron canadensis HOM05D003963 ORTHO05D004558 2.0e-17 94.0 204 37.7
Prupe.1G559700 Prunus persica HOM05D003963 ORTHO05D004558 2.0e-17 94.0 217 36.4
Solyc01g104910.3 Solanum lycopersicum HOM05D003963 ORTHO05D004558 2.0e-17 94.0 230 35.7
Actinidia28070 Actinidia chinensis HOM05D003963 ORTHO05D004558 2.6e-17 93.6 235 37.0
Aa31LG3G17400 Aethionema arabicum HOM05D003963 ORTHO05D004558 2.6e-17 93.6 237 34.2
Aa31sc1834G20 Aethionema arabicum HOM05D003963 ORTHO05D004558 2.6e-17 93.6 237 34.2
CSS0022227 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 2.6e-17 93.6 229 35.8
AUR62027385 Chenopodium quinoa HOM05D003963 ORTHO05D004558 2.6e-17 93.6 231 33.8
Dinv19323 Davidia involucrata HOM05D003963 ORTHO05D004558 2.6e-17 93.6 231 37.7
Thhalv10003819m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 2.6e-17 93.6 219 38.4
MD08G1221900 Malus domestica HOM05D003963 ORTHO05D004558 2.6e-17 93.6 234 35.5
Nitab4.5_0002865g0100 Nicotiana tabacum HOM05D003963 ORTHO05D004558 2.6e-17 93.6 237 35.0
Atru.chr6.908 Acer truncatum HOM05D003963 ORTHO05D004558 4.5e-17 92.8 244 34.4
Gorai.005G217900 Gossypium raimondii HOM05D003963 ORTHO05D004558 4.5e-17 92.8 234 35.9
EL10Ac8g19340 Beta vulgaris HOM05D003963 ORTHO05D004558 5.8e-17 92.4 227 33.9
CSS0000527 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 5.8e-17 92.4 232 35.3
Ah.09g232110 Amaranthus hybridus HOM05D003963 ORTHO05D004558 7.6e-17 92.0 220 36.4
CiPaw.06G151200 Carya illinoinensis HOM05D003963 ORTHO05D004558 7.6e-17 92.0 234 34.2
Gohir.D02G195000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 7.6e-17 92.0 234 35.9
Sopen01g047420 Solanum pennellii HOM05D003963 ORTHO05D004558 7.6e-17 92.0 228 36.4
PGSC0003DMG400029740 Solanum tuberosum HOM05D003963 ORTHO05D004558 1.0e-16 91.7 225 36.9
Duzib052G0219 Durio zibethinus HOM05D003963 ORTHO05D004558 1.3e-16 91.3 239 34.7
Duzib248G1667 Durio zibethinus HOM05D003963 ORTHO05D004558 1.3e-16 91.3 240 33.8
Ciclev10000572m.g Citrus clementina HOM05D003963 ORTHO05D004558 1.7e-16 90.9 227 34.8
Eucgr.I02691 Eucalyptus grandis HOM05D003963 ORTHO05D004558 1.7e-16 90.9 224 34.4
FAN04G2665 Fragaria x ananassa HOM05D003963 ORTHO05D004558 1.7e-16 90.9 248 33.9
Atru.chr10.2101 Acer truncatum HOM05D003963 ORTHO05D004558 2.2e-16 90.5 247 35.2
CiPaw.05G038900 Carya illinoinensis HOM05D003963 ORTHO05D004558 2.2e-16 90.5 229 35.8
AUR62031300 Chenopodium quinoa HOM05D003963 ORTHO05D004558 2.2e-16 90.5 231 33.3
Lalb_Chr13g0291591 Lupinus albus HOM05D003963 ORTHO05D004558 2.2e-16 90.5 261 34.1
VMungo0251G0315 Vigna mungo HOM05D003963 ORTHO05D004558 2.2e-16 90.5 256 33.2
DCAR_029216 Daucus carota HOM05D003963 ORTHO05D004558 2.9e-16 90.1 224 34.4
FAN13G1550 Fragaria x ananassa HOM05D003963 ORTHO05D004558 2.9e-16 90.1 247 34.0
GSVIVG01038733001 Vitis vinifera HOM05D003963 ORTHO05D004558 2.9e-16 90.1 213 37.6
Ah.14g085400 Amaranthus hybridus HOM05D003963 ORTHO05D004558 6.5e-16 89.0 224 34.4
Rhsim11G0134700 Rhododendron simsii HOM05D003963 ORTHO05D004558 6.5e-16 89.0 223 33.6
Sc14g0002710 Simmondsia chinensis HOM05D003963 ORTHO05D004558 8.4e-16 88.6 223 35.0
Gohir.D13G056000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 1.4e-15 87.8 241 33.2
MELO3C020350.2 Cucumis melo HOM05D003963 ORTHO05D004558 1.9e-15 87.4 229 37.1
Zm00001eb423980 Zea mays HOM05D003963 ORTHO05D004558 1.9e-15 87.4 250 33.6
Carub.0008s2535 Capsella rubella HOM05D003963 ORTHO05D004558 2.5e-15 87.0 220 37.3
CsaV3_2G011200 Cucumis sativus L. HOM05D003963 ORTHO05D004558 2.5e-15 87.0 229 37.1
Gorai.013G063300 Gossypium raimondii HOM05D003963 ORTHO05D004558 2.5e-15 87.0 239 33.9
Gohir.A13G065700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 3.2e-15 86.7 230 34.8
Hma1.2p1_0557F.1_g178060 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 4.2e-15 86.3 217 36.4
AL8G41940 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 5.5e-15 85.9 220 37.3
Zm00001eb080920 Zea mays HOM05D003963 ORTHO05D004558 5.5e-15 85.9 224 33.9
ClCG06G009720 Citrullus lanatus HOM05D003963 ORTHO05D004558 9.3e-15 85.1 227 35.2
Manes.04G062400 Manihot esculenta HOM05D003963 ORTHO05D004558 9.3e-15 85.1 250 31.6
Sp2g27620 Schrenkiella parvula HOM05D003963 ORTHO05D004558 9.3e-15 85.1 217 35.9
Sed0018276 Sechium edule HOM05D003963 ORTHO05D004558 2.1e-14 84.0 225 34.2
Migut.B00637 Erythranthe guttata HOM05D003963 ORTHO05D004558 2.7e-14 83.6 203 34.5
AT5G64550 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 3.5e-14 83.2 222 36.0
CDE02G0069 Ceratophyllum demersum HOM05D003963 ORTHO05D004558 3.5e-14 83.2 219 33.8
TWI23G1041 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 3.5e-14 83.2 228 34.6
Nn1g05173 Nelumbo nucifera HOM05D003963 ORTHO05D004558 4.6e-14 82.8 240 35.0
MSTRG.16566 Avicennia marina HOM05D003963 ORTHO05D004558 1.8e-13 80.9 230 33.5
Peaxi162Scf00152g01123 Petunia axillaris HOM05D003963 ORTHO05D004558 3.0e-13 80.1 236 33.1
BcaC03g18430 Brassica carinata HOM05D003963 ORTHO05D004558 5.1e-13 79.3 215 35.8
A06p31280 Brassica napus HOM05D003963 ORTHO05D004558 5.1e-13 79.3 203 36.0
AL6G20100 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 6.7e-13 79.0 205 35.1
AT5G09670 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 6.7e-13 79.0 195 36.4
BraA06t26067Z Brassica rapa HOM05D003963 ORTHO05D004558 6.7e-13 79.0 203 36.0
SalBow6G3757 Salvia bowleyana HOM05D003963 ORTHO05D004558 2.5e-12 77.0 215 30.7
SalBow6G4534 Salvia bowleyana HOM05D003963 ORTHO05D004558 2.5e-12 77.0 215 30.7
Sp6g33710 Schrenkiella parvula HOM05D003963 ORTHO05D004558 2.5e-12 77.0 207 34.8
BolC3t18432H Brassica oleracea HOM05D003963 ORTHO05D004558 5.7e-12 75.9 203 35.0
Thhalv10013049m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 7.4e-12 75.5 209 32.1
Aa31LG1G17380 Aethionema arabicum HOM05D003963 ORTHO05D004558 9.6e-12 75.1 203 36.0
Oeu000233.2 Olea europaea HOM05D003963 ORTHO05D004558 9.6e-12 75.1 223 33.2
unitig_62.g23623 Utricularia gibba HOM05D003963 ORTHO05D004558 1.3e-11 74.7 200 34.0
Phvul.002G206700 Phaseolus vulgaris HOM05D003963 ORTHO05D004558 1.6e-11 74.3 185 36.8
Zm00001eb068980 Zea mays HOM05D003963 ORTHO05D004558 1.6e-11 74.3 210 33.8
Zm00001eb182980 Zea mays HOM05D003963 ORTHO05D004558 1.6e-11 74.3 223 32.7
ECA234G1426 Erigeron canadensis HOM05D003963 ORTHO05D004558 2.1e-11 73.9 228 31.6
CARHR278520 Cardamine hirsuta HOM05D003963 ORTHO05D004558 2.8e-11 73.6 204 34.8
C03p61710 Brassica napus HOM05D003963 ORTHO05D004558 3.7e-11 73.2 198 35.4
Zm00001eb347870 Zea mays HOM05D003963 ORTHO05D010684 1.1e-10 71.6 209 34.0
BcaB05g21539 Brassica carinata HOM05D003963 ORTHO05D004558 2.4e-10 70.5 194 34.5
THA.LOC104799580 Tarenaya hassleriana HOM05D003963 ORTHO05D004558 3.1e-10 70.1 221 33.0
Gohir.A03G171700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 5.3e-10 69.3 182 36.3
Zm00001eb244890 Zea mays HOM05D003963 ORTHO05D004558 5.3e-10 69.3 184 32.6
Lalb_Chr12g0208491 Lupinus albus HOM05D003963 ORTHO05D004558 6.9e-10 68.9 248 31.9
Actinidia00250 Actinidia chinensis HOM05D003963 ORTHO05D004558 9.0e-10 68.6 211 36.5
SalBow5G2159 Salvia bowleyana HOM05D003963 ORTHO05D004558 2.0e-09 67.4 222 32.0
C02p63440 Brassica napus HOM05D003963 ORTHO05D004558 4.5e-09 66.2 203 36.9
BolC2t12411H Brassica oleracea HOM05D003963 ORTHO05D004558 4.5e-09 66.2 203 36.9
BraA02t09261Z Brassica rapa HOM05D003963 ORTHO05D004558 5.9e-09 65.9 191 36.6
ATR0564G216 Amborella trichopoda HOM05D003963 ORTHO05D004558 7.6e-09 65.5 214 33.6
A02p43350 Brassica napus HOM05D003963 ORTHO05D004558 7.6e-09 65.5 191 36.6
Os02g0575700 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 7.6e-09 65.5 166 32.5
BcaB07g29747 Brassica carinata HOM05D003963 ORTHO05D004558 1.0e-08 65.1 197 33.5
Rhsim11G0135400 Rhododendron simsii HOM05D003963 ORTHO05D004558 1.0e-08 65.1 234 32.5
Hund06704 Selenicereus undatus HOM05D003963 ORTHO05D004558 2.2e-08 63.9 211 30.3
SGA_v2.0_scaffold45G17289 Striga asiatica HOM05D003963 ORTHO05D004558 2.2e-08 63.9 197 33.5
CARHR203720 Cardamine hirsuta HOM05D003963 ORTHO05D004558 5.0e-08 62.8 195 34.4
BraA02t04995Z Brassica rapa HOM05D003963 ORTHO05D004558 7.2e-07 58.9 193 32.1
Lalb_Chr07g0189461 Lupinus albus HOM05D003963 ORTHO05D004558 7.2e-07 58.9 209 32.5
A02p00100 Brassica napus HOM05D003963 ORTHO05D004558 1.2e-06 58.2 195 32.8
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 2.1e-06 57.4 200 29.0
HanXRQChr10g0293231 Helianthus annuus HOM05D003963 ORTHO05D004558 4.6e-06 56.2 197 29.9


User provided reference genes

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