Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.5e-75 283.5 150 100.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.5e-75 283.5 150 100.0
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 3.0e-52 208.8 150 74.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 3.0e-52 208.8 150 74.0
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 8.6e-52 207.2 150 75.3
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 1.1e-51 206.8 150 74.7
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.9e-51 206.1 148 75.0
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.9e-51 206.1 148 75.0
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.9e-51 206.1 150 73.3
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 3.3e-51 205.3 150 74.7
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 3.3e-51 205.3 150 74.7
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.3e-51 205.3 148 75.0
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.3e-51 204.9 148 74.3
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 4.3e-51 204.9 148 74.3
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 4.3e-51 204.9 150 75.3
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 9.6e-51 203.8 150 73.3
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 9.6e-51 203.8 150 74.0
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.1e-50 202.6 151 74.2
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.1e-50 202.6 151 74.2
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 2.8e-50 202.2 150 73.3
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 2.8e-50 202.2 150 73.3
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 3.6e-50 201.8 150 72.0
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 3.6e-50 201.8 150 73.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 3.6e-50 201.8 150 72.7
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 4.7e-50 201.4 150 72.7
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 4.7e-50 201.4 150 72.7
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 6.2e-50 201.1 150 71.3
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.1e-49 200.3 150 73.3
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 1.1e-49 200.3 150 72.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 1.4e-49 199.9 150 70.7
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.4e-49 199.9 150 71.3
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.4e-49 199.9 148 70.9
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 1.8e-49 199.5 150 72.7
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.8e-49 199.5 150 72.7
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 2.4e-49 199.1 150 72.7
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 3.1e-49 198.7 150 70.7
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.1e-49 198.7 150 72.0
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 3.1e-49 198.7 150 72.0
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 4.0e-49 198.4 150 72.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.2e-49 198.0 150 74.0
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.2e-49 198.0 150 74.0
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.2e-49 198.0 150 74.0
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 5.2e-49 198.0 150 70.0
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 6.9e-49 197.6 150 70.0
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 9.0e-49 197.2 146 72.6
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.2e-48 196.8 150 71.3
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-48 196.8 150 72.7
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.2e-48 196.8 151 71.5
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 1.5e-48 196.4 153 69.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 1.5e-48 196.4 150 71.3
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.0e-48 196.1 150 70.7
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.0e-48 196.1 150 70.7
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.4e-48 195.3 150 72.0
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.4e-48 195.3 150 72.0
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 3.4e-48 195.3 150 71.3
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.4e-48 195.3 150 72.0
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 4.4e-48 194.9 150 70.7
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 4.4e-48 194.9 150 71.3
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 5.8e-48 194.5 150 72.7
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.9e-48 193.7 150 72.7
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 9.9e-48 193.7 150 72.7
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 9.9e-48 193.7 150 70.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 1.3e-47 193.4 150 70.0
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 2.2e-47 192.6 150 70.0
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 2.2e-47 192.6 150 72.7
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 2.2e-47 192.6 150 73.3
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 2.2e-47 192.6 149 71.1
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 2.9e-47 192.2 150 71.3
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.9e-47 192.2 150 69.3
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 2.9e-47 192.2 152 70.4
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 3.8e-47 191.8 150 72.0
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 3.8e-47 191.8 150 71.3
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 4.9e-47 191.4 150 70.7
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 4.9e-47 191.4 150 70.0
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 6.4e-47 191.0 150 70.7
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.1e-46 190.3 150 70.0
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 4.2e-46 188.3 150 69.3
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 1.2e-45 186.8 150 69.3
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.6e-45 186.4 150 69.3
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.7e-45 185.7 150 65.3
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 3.5e-45 185.3 156 66.0
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 4.6e-45 184.9 150 69.3
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 7.8e-45 184.1 148 66.9
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 3.0e-44 182.2 141 70.9
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 5.1e-44 181.4 150 68.7
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 6.6e-44 181.0 142 71.1
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.1e-43 180.3 153 68.6
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.3e-43 178.7 157 63.7
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 4.3e-43 178.3 160 62.5
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 7.3e-43 177.6 156 64.1
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 7.3e-43 177.6 161 62.1
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 7.3e-43 177.6 150 62.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 3.6e-42 175.3 157 61.8
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 4.8e-42 174.9 155 63.9
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 4.8e-42 174.9 152 64.5
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.8e-41 172.9 159 61.6
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.4e-41 172.6 163 59.5
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 5.3e-41 171.4 150 63.3
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 6.9e-41 171.0 124 75.0
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 6.9e-41 171.0 153 62.7
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 6.9e-41 171.0 154 64.3
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.5e-40 169.9 150 62.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-40 169.5 150 64.0
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.4e-40 168.7 150 64.0
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.2e-39 166.0 150 63.3
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.2e-39 166.0 151 62.3
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.3e-36 156.8 143 61.5
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.3e-36 156.8 143 61.5
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 3.9e-36 155.2 148 57.4
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.9e-36 155.2 105 76.2
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 5.1e-36 154.8 151 62.9
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 6.7e-36 154.5 109 76.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.1e-35 153.7 115 71.3
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 6.9e-33 144.4 100 75.0
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.3e-31 140.2 145 61.4
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.2e-29 133.7 150 56.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.6e-29 133.3 151 55.0
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.6e-29 131.7 121 62.8
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 1.1e-27 127.1 135 55.6
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 6.2e-26 121.3 156 47.4
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 8.2e-26 120.9 82 73.2
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 8.2e-26 120.9 84 73.8
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 2.4e-25 119.4 127 51.2
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 3.1e-25 119.0 82 74.4
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 6.9e-25 117.9 128 50.8
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 9.0e-25 117.5 82 73.2
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.3e-18 97.1 129 43.4
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 1.6e-18 96.7 78 64.1
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 4.8e-18 95.1 166 44.0
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 3.1e-17 92.4 79 59.5
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 9.0e-17 90.9 79 53.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 2.0e-16 89.7 79 60.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.2e-15 86.3 71 63.4
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.2e-15 86.3 71 63.4
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.1e-14 84.0 69 59.4
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.4e-14 83.6 69 58.0
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.9e-14 83.2 69 59.4
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 9.3e-14 80.9 71 56.3
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 7.9e-13 77.8 69 52.2
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.0e-12 77.4 75 60.0
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 5.1e-12 75.1 146 39.0
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 4.3e-11 72.0 72 50.0
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.7e-10 70.1 119 42.0
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.2e-10 69.7 72 50.0
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 3.7e-10 68.9 72 50.0
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 3.1e-09 65.9 70 47.1
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 2.9e-07 59.3 51 62.7
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 3.2e-06 55.8 72 40.3


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