Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 1.3e-126 456.4 236 100.0
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 5.4e-48 195.3 215 53.0
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 1.5e-45 187.2 230 50.9
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 4.0e-43 179.1 262 46.9
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 2.6e-42 176.4 218 52.3
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 2.6e-42 176.4 195 53.3
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 5.7e-42 175.3 234 45.7
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 8.3e-41 171.4 223 46.2
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 5.4e-40 168.7 190 50.5
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 7.0e-40 168.3 200 49.5
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 7.0e-40 168.3 200 49.0
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 7.0e-40 168.3 193 51.8
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.6e-39 167.2 204 49.0
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.0e-39 166.8 245 45.7
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 2.7e-39 166.4 208 47.1
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 2.7e-39 166.4 200 50.5
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 4.5e-39 165.6 208 47.1
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 5.9e-39 165.2 238 45.4
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.0e-38 164.5 190 51.6
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-38 164.1 186 52.7
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-38 164.1 186 52.7
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 1.7e-38 163.7 193 50.3
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 2.3e-38 163.3 239 44.8
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 2.9e-38 162.9 229 44.1
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 5.0e-38 162.2 223 47.1
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 6.6e-38 161.8 218 47.7
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 6.6e-38 161.8 184 53.3
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 1.1e-37 161.0 175 53.1
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.9e-37 160.2 186 52.2
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.9e-37 160.2 186 52.2
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 1.9e-37 160.2 220 45.9
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 2.5e-37 159.8 236 42.8
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 3.3e-37 159.5 236 44.9
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.3e-37 159.1 218 47.2
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 5.6e-37 158.7 247 42.9
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 5.6e-37 158.7 217 47.0
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 7.2e-37 158.3 237 44.7
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 9.5e-37 157.9 240 41.7
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 9.5e-37 157.9 216 50.0
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.2e-36 157.5 219 50.2
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.2e-36 157.5 211 47.9
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.2e-36 157.5 216 45.8
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.2e-36 157.5 199 49.2
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.2e-36 157.5 216 50.0
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.2e-36 157.5 207 45.9
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.6e-36 157.1 199 49.2
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.8e-36 156.4 223 45.7
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 4.7e-36 155.6 221 46.6
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 4.7e-36 155.6 200 48.0
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 1.0e-35 154.5 236 44.1
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 1.0e-35 154.5 195 49.2
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.4e-35 154.1 251 43.8
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.8e-35 153.7 164 50.6
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.8e-35 153.7 233 44.2
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 3.0e-35 152.9 237 43.5
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.0e-35 152.9 194 49.5
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 4.0e-35 152.5 151 54.3
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 5.2e-35 152.1 174 50.6
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 5.2e-35 152.1 269 39.0
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 5.2e-35 152.1 140 52.1
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-34 151.0 116 62.9
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 1.2e-34 151.0 132 59.1
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.2e-34 151.0 223 42.2
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 2.0e-34 150.2 224 44.2
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 3.4e-34 149.4 177 51.4
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 9.8e-34 147.9 214 44.9
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 1.7e-33 147.1 181 48.6
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 2.2e-33 146.7 194 45.9
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 8.3e-33 144.8 239 41.8
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 8.3e-33 144.8 122 61.5
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 1.1e-32 144.4 246 41.5
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 1.4e-32 144.1 119 61.3
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.4e-32 144.1 179 44.1
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.8e-32 143.7 233 42.1
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.8e-32 143.7 194 44.8
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.8e-32 143.7 177 50.8
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.8e-32 143.7 177 50.8
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 4.1e-32 142.5 214 43.0
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 5.4e-32 142.1 192 47.4
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 9.2e-32 141.4 192 44.8
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 9.2e-32 141.4 188 46.8
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-31 141.0 109 61.5
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.6e-31 140.6 284 37.0
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 3.5e-31 139.4 193 46.6
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 3.5e-31 139.4 181 45.3
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 4.6e-31 139.0 193 47.2
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 1.0e-30 137.9 172 50.0
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 1.3e-30 137.5 251 39.8
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 3.0e-30 136.3 189 47.1
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 6.6e-30 135.2 199 44.2
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 8.6e-30 134.8 200 43.5
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.1e-29 134.4 204 43.6
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 5.6e-29 132.1 204 42.2
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 5.6e-29 132.1 191 46.1
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 2.8e-28 129.8 157 53.5
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 2.3e-27 126.7 97 63.9
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 2.0e-26 123.6 246 37.4
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.2e-25 120.2 196 38.8
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 3.2e-24 116.3 197 39.1
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 4.1e-24 115.9 196 39.3
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 3.5e-23 112.8 229 35.4
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 4.6e-23 112.5 140 45.0
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 2.3e-22 110.2 197 38.1
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 5.0e-22 109.0 166 47.0
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 2.8e-20 103.2 161 43.5
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 6.4e-17 92.0 147 37.4
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 1.3e-14 84.3 105 43.8
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 4.3e-13 79.3 106 51.9
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 2.1e-12 77.0 106 50.9
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 3.1e-11 73.2 143 34.3
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 1.9e-08 63.9 61 54.1
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 3.5e-07 59.7 51 58.8
Sabra19G0056100 Salix brachista HOM05D006369 ORTHO05D007764 6.0e-07 58.9 83 38.6
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 6.0e-07 58.9 49 67.3


User provided reference genes

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