Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.0e-244 846.7 428 100.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.0e-203 711.4 373 96.2
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 7.9e-74 282.0 307 51.8
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.4e-70 271.2 313 50.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 9.0e-70 268.5 285 53.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.7e-68 264.2 234 58.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 2.2e-68 263.8 296 49.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 4.2e-67 259.6 279 52.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.2e-66 258.1 283 51.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.6e-66 257.7 328 47.6
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 2.1e-66 257.3 248 52.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 6.1e-66 255.8 275 51.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 7.9e-66 255.4 226 58.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.0e-65 255.0 307 49.5
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.8e-65 254.2 329 47.7
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-65 253.8 272 52.9
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-65 253.8 266 54.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 6.7e-65 252.3 260 53.1
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.5e-64 251.1 250 54.8
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.5e-64 251.1 275 50.2
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.9e-64 250.8 339 43.4
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.5e-64 250.4 284 51.4
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.5e-64 250.4 253 54.2
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 4.3e-64 249.6 225 57.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 9.7e-64 248.4 229 57.6
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 9.7e-64 248.4 317 46.4
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.3e-63 248.1 235 57.4
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.3e-63 248.1 291 47.8
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.6e-63 247.7 226 55.8
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.6e-63 247.7 275 52.0
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.2e-63 247.3 242 53.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.2e-63 247.3 235 57.4
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.8e-63 246.9 268 52.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.8e-63 246.9 266 53.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.8e-63 246.9 226 57.5
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.7e-63 246.5 241 55.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.3e-63 245.7 314 44.6
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.2e-63 245.4 296 47.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.1e-62 245.0 253 53.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-62 244.6 222 58.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-62 244.6 276 51.1
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.8e-62 244.2 279 51.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.8e-62 244.2 286 49.3
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.4e-62 243.8 266 52.6
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.4e-62 243.8 276 50.7
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 5.3e-62 242.7 233 55.8
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 9.0e-62 241.9 260 51.9
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 9.0e-62 241.9 249 51.0
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.2e-61 241.5 223 57.0
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.2e-61 241.5 292 49.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.5e-61 241.1 226 54.0
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.6e-61 240.4 260 53.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 5.9e-61 239.2 250 52.4
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 7.7e-61 238.8 290 47.2
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 7.7e-61 238.8 276 50.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.7e-61 238.8 276 50.0
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.7e-60 237.7 293 48.5
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.2e-60 237.3 229 57.2
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.9e-60 236.9 202 59.9
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.8e-60 236.5 327 45.9
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.5e-60 235.3 259 50.6
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 8.5e-60 235.3 276 50.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.4e-59 234.6 225 56.4
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.2e-59 233.4 225 53.8
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.2e-59 233.4 225 53.8
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 4.2e-59 233.0 255 49.0
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 7.2e-59 232.3 255 49.4
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.4e-59 231.9 225 52.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.6e-58 231.1 270 49.6
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.4e-57 228.0 213 54.5
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 3.0e-57 226.9 293 47.4
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.1e-56 224.9 227 52.9
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 2.5e-56 223.8 225 53.8
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 9.7e-56 221.9 307 42.3
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 9.7e-56 221.9 167 65.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.8e-55 220.3 298 45.6
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.8e-55 219.5 277 47.3
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.8e-54 217.6 223 53.4
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 2.4e-54 217.2 172 62.2
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 3.1e-54 216.9 271 46.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 6.9e-54 215.7 223 51.6
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.2e-53 214.9 223 51.6
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.2e-52 210.7 272 47.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.9e-52 210.3 173 59.5
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.9e-52 210.3 173 59.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 3.8e-52 209.9 249 48.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 6.5e-52 209.1 361 41.0
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 8.5e-52 208.8 214 53.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.1e-51 208.4 173 59.0
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.2e-51 206.8 210 53.3
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 5.5e-51 206.1 187 56.7
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.6e-50 203.4 297 40.1
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 6.1e-50 202.6 317 41.0
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-48 198.0 167 61.1
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.5e-48 198.0 328 39.9
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 9.7e-48 195.3 234 47.4
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.7e-47 193.4 206 54.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 8.2e-47 192.2 153 63.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 4.2e-43 179.9 230 49.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.9e-41 173.3 188 50.5
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.0e-37 161.0 164 53.0
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.7e-36 157.9 182 49.5
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 9.4e-35 152.1 267 40.1
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.7e-34 149.8 153 52.3
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 2.3e-33 147.5 326 31.9
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 3.0e-33 147.1 197 43.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.4e-30 137.5 99 67.7
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-28 131.7 149 53.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.1e-26 124.4 89 67.4
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.0e-25 120.6 87 66.7
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 4.0e-25 120.2 148 48.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.8e-25 119.4 92 62.0
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 5.5e-19 99.8 196 30.1
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 7.2e-19 99.4 166 32.5
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 5.9e-13 79.7 69 58.0
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 5.0e-12 76.6 55 65.5
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 5.0e-12 76.6 117 39.3
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 2.8e-10 70.9 166 30.7
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 4.9e-07 60.1 132 38.6
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.4e-06 57.8 74 48.6
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.2e-06 57.4 74 54.1


User provided reference genes

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