Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.2e-69 264.2 130 100.0
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 9.2e-34 147.1 92 78.3
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 3.5e-33 145.2 91 76.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 4.6e-33 144.8 130 60.0
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 1.0e-32 143.7 91 80.2
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.7e-32 142.9 84 82.1
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 3.9e-32 141.7 84 81.0
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.9e-32 141.7 84 81.0
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 3.9e-32 141.7 144 58.3
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.6e-32 141.0 84 82.1
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 8.6e-32 140.6 84 82.1
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 8.6e-32 140.6 84 79.8
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.1e-31 140.2 84 81.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.5e-31 139.8 86 80.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.5e-31 139.8 86 80.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.5e-31 139.8 84 81.0
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 1.5e-31 139.8 84 81.0
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.5e-31 139.8 84 81.0
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.9e-31 139.4 84 81.0
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.9e-31 139.4 84 81.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.9e-31 139.4 84 81.0
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.9e-31 139.4 84 79.8
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 2.5e-31 139.0 84 81.0
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 2.5e-31 139.0 83 80.7
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 2.5e-31 139.0 133 58.6
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.3e-31 138.7 84 81.0
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 3.3e-31 138.7 84 81.0
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.3e-31 138.7 84 81.0
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 3.3e-31 138.7 91 75.8
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 3.3e-31 138.7 84 79.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.3e-31 138.7 98 74.5
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 4.3e-31 138.3 88 76.1
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 4.3e-31 138.3 83 79.5
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 4.3e-31 138.3 91 78.0
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.3e-31 138.3 132 59.8
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.3e-31 138.3 132 59.8
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 5.6e-31 137.9 136 57.4
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 5.6e-31 137.9 84 79.8
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 5.6e-31 137.9 84 81.0
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 5.6e-31 137.9 126 63.5
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 7.3e-31 137.5 84 77.4
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 7.3e-31 137.5 84 76.2
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 7.3e-31 137.5 84 76.2
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 7.3e-31 137.5 84 78.6
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 7.3e-31 137.5 134 60.4
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 9.5e-31 137.1 84 78.6
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 9.5e-31 137.1 84 79.8
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 9.5e-31 137.1 84 79.8
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 9.5e-31 137.1 120 61.7
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.2e-30 136.7 84 78.6
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.2e-30 136.7 84 79.8
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.2e-30 136.7 83 78.3
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 1.6e-30 136.3 83 78.3
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 2.1e-30 136.0 89 76.4
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 2.1e-30 136.0 89 76.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 2.1e-30 136.0 89 76.4
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 2.1e-30 136.0 89 76.4
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 2.1e-30 136.0 107 65.4
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.1e-30 136.0 99 72.7
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 2.1e-30 136.0 144 53.5
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 2.8e-30 135.6 89 74.2
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 3.6e-30 135.2 143 56.6
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 3.6e-30 135.2 84 77.4
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 3.6e-30 135.2 83 77.1
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 3.6e-30 135.2 104 68.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 4.7e-30 134.8 82 78.0
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.7e-30 134.8 84 77.4
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 4.7e-30 134.8 83 77.1
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 6.2e-30 134.4 82 78.0
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 6.2e-30 134.4 85 78.8
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 6.2e-30 134.4 84 77.4
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 8.1e-30 134.0 84 76.2
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.1e-29 133.7 101 67.3
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.4e-29 133.3 84 77.4
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.3e-29 132.5 84 75.0
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.3e-29 132.5 84 76.2
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.3e-29 132.5 120 59.2
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 2.3e-29 132.5 84 75.0
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 3.1e-29 132.1 86 75.6
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 4.0e-29 131.7 83 75.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 4.0e-29 131.7 83 75.9
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 4.0e-29 131.7 83 78.3
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 4.0e-29 131.7 84 75.0
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 4.0e-29 131.7 84 75.0
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 6.8e-29 131.0 84 73.8
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 8.9e-29 130.6 83 73.5
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.9e-29 130.6 83 75.9
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.9e-29 130.6 83 75.9
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.2e-28 130.2 101 67.3
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.2e-28 130.2 83 75.9
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.2e-28 130.2 83 75.9
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.0e-28 129.4 85 75.3
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.6e-28 129.0 104 64.4
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.4e-28 128.6 83 72.3
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.4e-28 128.3 83 74.7
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 5.8e-28 127.9 88 67.0
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 7.5e-28 127.5 84 72.6
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.3e-27 126.7 89 69.7
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.2e-27 125.9 83 72.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 6.4e-27 124.4 75 80.0
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 5.4e-26 121.3 81 70.4
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 3.9e-24 115.2 72 76.4
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.9e-23 112.8 82 68.3
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.4e-18 96.7 77 67.5
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.8e-14 82.4 46 78.3
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 3.6e-06 55.5 45 62.2
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 4.8e-06 55.1 42 61.9


User provided reference genes

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