Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 0.0e+00 1088.9 551 100.0
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 5.9e-308 1060.1 551 96.6
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.4e-179 633.6 537 60.3
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 3.4e-178 629.0 550 58.9
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 7.8e-175 617.8 532 58.5
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 1.7e-174 616.7 563 57.4
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.7e-174 616.7 549 56.5
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.5e-173 613.6 531 59.5
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 1.5e-173 613.6 544 58.1
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 5.6e-173 611.7 539 58.1
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 1.8e-171 606.7 539 59.6
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 2.3e-171 606.3 546 57.3
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 3.1e-171 605.9 541 57.1
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 3.4e-170 602.4 531 59.1
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 4.4e-170 602.1 525 58.5
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 1.3e-169 600.5 547 58.1
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.3e-169 600.5 532 58.5
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 3.8e-169 599.0 548 56.9
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 8.4e-169 597.8 524 56.3
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.4e-168 597.0 531 58.4
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 1.9e-168 596.7 531 57.4
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 5.4e-168 595.1 531 58.9
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 5.4e-168 595.1 529 58.6
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 7.1e-168 594.7 532 57.3
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.6e-167 593.6 529 58.4
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 6.0e-167 591.7 539 57.7
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 1.7e-166 590.1 528 57.2
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 3.0e-166 589.3 532 54.9
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 3.0e-166 589.3 533 58.3
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 3.9e-166 589.0 531 56.5
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 5.1e-166 588.6 546 57.5
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 5.1e-166 588.6 535 57.4
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 8.6e-166 587.8 546 57.5
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.1e-165 587.4 527 56.9
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 5.6e-165 585.1 548 53.8
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 5.6e-165 585.1 531 56.5
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 5.6e-165 585.1 524 59.4
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 2.1e-164 583.2 555 55.7
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 3.6e-164 582.4 536 56.0
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.4e-163 580.5 526 57.0
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.4e-163 580.5 539 55.7
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 2.4e-163 579.7 550 54.2
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 2.6e-162 576.2 525 57.5
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 2.6e-162 576.2 554 54.5
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 3.4e-162 575.9 527 56.2
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 9.9e-162 574.3 524 56.1
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 4.9e-161 572.0 558 54.7
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.4e-160 570.5 550 56.2
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 1.9e-160 570.1 530 56.0
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 2.4e-160 569.7 532 56.6
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 1.6e-159 567.0 524 54.8
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 2.1e-159 566.6 539 54.4
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 4.6e-159 565.5 533 56.5
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 7.8e-159 564.7 532 54.1
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 1.7e-158 563.5 546 54.8
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 1.7e-158 563.5 536 56.0
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 3.0e-158 562.8 577 51.1
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 6.6e-158 561.6 537 54.6
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 3.3e-157 559.3 530 55.3
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 3.3e-157 559.3 532 55.6
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 4.3e-157 558.9 525 55.0
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 8.1e-156 554.7 536 53.7
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 3.1e-155 552.7 528 53.2
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 6.9e-155 551.6 526 52.9
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 3.4e-154 549.3 526 54.0
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 5.8e-154 548.5 591 48.9
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 1.1e-152 544.3 525 53.7
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 5.4e-152 542.0 548 52.4
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 1.0e-150 537.7 526 52.1
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 1.6e-148 530.4 531 54.6
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 8.1e-148 528.1 509 54.0
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 1.8e-147 526.9 526 51.0
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 4.0e-147 525.8 528 53.2
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 1.5e-146 523.9 501 53.3
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 7.6e-146 521.5 583 48.5
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 7.6e-146 521.5 439 61.3
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 1.2e-143 514.2 548 49.8
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 1.0e-142 511.1 556 49.8
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 3.1e-139 499.6 534 50.4
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 5.3e-139 498.8 453 57.4
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 3.4e-138 496.1 527 49.7
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 4.5e-138 495.7 528 50.0
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 1.1e-136 491.1 526 49.6
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 4.6e-135 485.7 525 48.6
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.0e-134 484.6 450 56.2
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 5.1e-134 482.3 561 48.7
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 4.1e-131 472.6 541 49.4
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 7.2e-128 461.8 526 47.1
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 4.6e-127 459.1 543 45.1
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.5e-125 453.4 546 45.1
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 7.4e-125 451.8 541 47.7
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 1.3e-124 451.1 529 45.6
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 2.7e-119 433.3 425 53.2
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 3.0e-118 429.9 406 53.0
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.3e-113 414.5 403 52.6
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 1.4e-110 404.4 567 43.4
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.7e-100 370.9 554 39.9
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 1.4e-99 367.9 505 43.4
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 5.5e-96 355.9 284 64.1
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 2.7e-95 353.6 349 51.9
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.4e-94 351.3 349 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 5.4e-91 339.3 468 41.0
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 2.0e-85 320.9 281 58.4
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 4.4e-85 319.7 294 56.8
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 5.6e-80 302.8 550 36.2
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 7.8e-74 282.3 381 40.7
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 6.8e-62 242.7 202 64.4
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 2.7e-58 230.7 560 29.8
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 7.8e-58 229.2 572 30.9
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 2.6e-53 214.2 211 53.6
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 4.9e-52 209.9 521 29.6
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 2.6e-45 187.6 170 51.8
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 2.4e-43 181.0 171 53.8
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 1.2e-42 178.7 178 52.2
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.9e-36 156.8 115 66.1
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 2.4e-35 154.5 135 57.8
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 1.3e-33 148.7 129 56.6
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.5e-29 133.7 113 60.2
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 6.7e-25 119.8 130 44.6
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 8.7e-25 119.4 85 64.7
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 4.0e-22 110.5 98 55.1
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 2.0e-21 108.2 93 54.8
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.2e-18 99.0 417 24.9
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 2.5e-11 74.7 78 52.6
arahy.Tifrunner.gnm1.ann1.6SNM9F Arachis hypogaea HOM05D005625 ORTHO05D007564 5.5e-11 73.6 118 41.5
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 2.1e-10 71.6 72 47.2
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 7.9e-10 69.7 71 46.5
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 3.0e-09 67.8 71 45.1
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 3.0e-09 67.8 71 45.1
arahy.Tifrunner.gnm1.ann1.GWKT0Q Arachis hypogaea HOM05D005625 ORTHO05D007564 8.8e-09 66.2 119 37.8
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 1.1e-08 65.9 165 27.9
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.7e-07 62.0 63 47.6
AagrBONN_evm.TU.Sc2ySwM_368.1004 Anthoceros agrestis HOM05D016773 ORTHO05D019668 5.3e-06 57.0 301 24.9


User provided reference genes

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