Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 1.1e-107 393.3 191 100.0
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.6e-79 299.7 190 74.7
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 8.1e-79 297.4 188 72.3
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.4e-78 296.6 190 72.1
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.0e-78 295.0 190 71.6
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 5.2e-78 294.7 190 71.1
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-77 293.1 190 70.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-77 293.1 190 70.5
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.5e-77 293.1 190 71.6
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 3.4e-77 292.0 190 70.5
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.8e-77 291.2 190 70.0
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 9.9e-77 290.4 190 71.6
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 9.9e-77 290.4 190 71.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 9.9e-77 290.4 190 71.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.3e-76 290.0 190 70.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.3e-76 290.0 190 71.1
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.3e-76 290.0 190 70.0
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.3e-76 290.0 188 70.7
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.7e-76 289.7 190 71.1
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 2.2e-76 289.3 190 72.1
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.2e-76 289.3 190 69.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.9e-76 288.9 190 69.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.8e-76 288.5 188 72.3
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 4.9e-76 288.1 190 72.6
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 6.4e-76 287.7 190 69.5
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 8.4e-76 287.3 190 69.5
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 8.4e-76 287.3 190 69.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.1e-75 287.0 190 70.5
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.4e-75 286.6 190 71.6
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.4e-75 286.6 190 71.1
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.4e-75 286.6 190 71.1
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.9e-75 286.2 190 68.4
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 3.2e-75 285.4 190 68.4
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 4.2e-75 285.0 190 68.4
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 9.3e-75 283.9 190 68.9
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 9.3e-75 283.9 190 70.0
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.2e-74 283.5 190 70.0
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.1e-74 282.7 190 69.5
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.7e-74 282.3 190 68.9
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 2.7e-74 282.3 188 68.1
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.5e-74 282.0 188 68.6
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.5e-74 282.0 190 69.5
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 4.6e-74 281.6 190 69.5
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 4.6e-74 281.6 188 70.7
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 6.0e-74 281.2 219 63.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 6.0e-74 281.2 190 68.9
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 7.8e-74 280.8 190 69.5
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 7.8e-74 280.8 185 71.4
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.0e-73 280.4 190 67.4
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.0e-73 278.9 190 67.9
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 3.0e-73 278.9 190 68.9
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 3.9e-73 278.5 190 67.4
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 5.1e-73 278.1 196 68.9
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 5.1e-73 278.1 185 70.3
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 5.1e-73 278.1 185 70.3
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.1e-72 276.9 190 65.3
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.5e-72 276.6 185 69.7
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.9e-72 276.2 190 65.8
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.5e-72 275.8 185 69.7
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.5e-72 275.8 190 66.3
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.5e-72 275.8 190 66.3
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.5e-72 275.8 191 68.1
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 3.3e-72 275.4 188 66.0
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 5.6e-72 274.6 190 68.9
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 9.6e-72 273.9 190 66.3
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 9.6e-72 273.9 188 68.1
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.3e-71 273.5 188 67.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-71 273.5 184 69.6
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.3e-71 273.5 190 67.9
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.8e-71 272.3 190 65.3
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.8e-71 271.6 185 68.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.5e-69 266.5 190 65.3
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 2.0e-69 266.2 190 64.7
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 2.9e-68 262.3 170 69.4
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.8e-68 261.9 206 62.1
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.9e-68 261.5 185 64.9
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 6.4e-68 261.2 188 63.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.9e-67 259.6 188 64.4
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 9.3e-67 257.3 185 63.8
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 3.0e-65 252.3 274 50.0
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 6.7e-65 251.1 254 51.6
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 3.3e-64 248.8 251 49.8
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 5.5e-59 231.5 186 56.5
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 4.8e-55 218.4 131 77.1
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 8.1e-55 217.6 188 57.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.7e-52 209.9 190 52.6
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 4.3e-48 195.3 124 71.8
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.1e-43 180.6 190 47.4
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 1.6e-42 176.8 119 68.9
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.3e-40 169.1 117 67.5
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.2e-39 166.4 190 46.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 9.7e-32 141.0 177 42.4
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.8e-30 136.7 153 47.1
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 4.1e-30 135.6 149 48.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 7.2e-27 124.8 114 49.1
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.0e-21 106.7 96 50.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 5.0e-20 102.1 71 66.2
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.2e-16 90.9 84 52.4


User provided reference genes

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