Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 4.8e-168 594.3 289 100.0
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.9e-80 302.8 224 62.5
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 4.1e-74 282.3 224 56.2
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.6e-68 263.1 221 54.8
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.1e-66 257.7 124 99.2
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.6e-65 253.1 223 52.5
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 1.9e-63 246.9 236 47.0
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.7e-62 243.0 231 47.6
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 3.6e-62 242.7 236 45.8
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 1.4e-61 240.7 224 48.7
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 6.8e-61 238.4 225 48.9
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.0e-60 236.9 226 48.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 5.7e-60 235.3 224 46.9
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 7.5e-60 235.0 237 45.6
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.3e-59 234.2 226 47.8
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.3e-59 234.2 231 45.5
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 2.8e-59 233.0 236 44.1
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.8e-59 232.3 221 47.5
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 6.3e-59 231.9 229 45.0
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 8.3e-59 231.5 219 45.7
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 3.1e-58 229.6 216 46.8
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 3.1e-58 229.6 238 45.0
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.2e-57 227.6 229 44.1
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.6e-57 227.3 221 46.6
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.0e-57 226.9 256 42.6
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 3.5e-57 226.1 239 45.2
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 7.7e-57 224.9 238 45.0
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.0e-56 224.6 217 45.6
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.0e-56 224.6 215 47.0
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.9e-56 223.0 242 44.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.8e-56 222.6 215 47.0
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 3.8e-56 222.6 236 42.8
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.0e-56 222.2 219 45.7
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 5.0e-56 222.2 219 46.6
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 5.0e-56 222.2 240 42.9
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 6.5e-56 221.9 219 45.2
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 6.5e-56 221.9 224 45.1
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 6.5e-56 221.9 218 45.9
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.5e-56 221.5 219 45.2
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.5e-56 221.5 219 45.2
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.1e-55 221.1 237 42.6
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.5e-55 219.9 237 43.5
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.2e-55 219.5 210 46.7
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.2e-55 218.4 219 44.7
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.7e-54 216.5 230 42.2
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 8.0e-54 214.9 207 44.9
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 8.0e-54 214.9 224 43.3
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 8.0e-54 214.9 200 46.5
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 5.2e-53 212.2 237 42.6
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.5e-52 210.7 234 42.3
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 2.6e-52 209.9 222 41.4
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 3.4e-52 209.5 237 41.4
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 7.5e-52 208.4 237 42.2
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 1.7e-51 207.2 222 43.2
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 2.2e-51 206.8 222 43.2
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 4.8e-51 205.7 230 41.3
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 8.3e-51 204.9 246 41.1
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.4e-50 204.1 226 42.5
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.8e-50 203.8 220 40.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.4e-50 203.4 236 41.5
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 3.1e-50 203.0 226 42.9
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 4.1e-50 202.6 222 40.5
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 7.0e-50 201.8 252 39.7
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 1.6e-49 200.7 217 42.4
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 4.5e-49 199.1 221 43.9
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 7.7e-49 198.4 226 39.8
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.3e-48 197.6 230 41.7
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 6.6e-48 195.3 176 43.2
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 8.6e-48 194.9 220 38.6
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.9e-47 193.7 235 39.1
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 9.5e-47 191.4 210 40.0
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.6e-46 190.7 244 39.3
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.1e-46 190.3 229 41.0
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.8e-45 187.2 217 37.3
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.3e-45 186.8 219 42.0
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 6.8e-45 185.3 238 39.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.7e-43 179.5 165 48.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.7e-41 173.3 212 38.2
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.5e-39 167.5 160 48.1
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 5.6e-39 165.6 226 35.8
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 7.3e-39 165.2 212 36.8
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.1e-38 162.2 176 40.9
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 6.8e-37 158.7 179 40.8
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.5e-36 157.5 234 35.0
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 2.8e-22 110.2 143 37.8
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 8.1e-22 108.6 102 43.1
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.1e-21 108.2 137 38.7
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 4.0e-21 106.3 168 33.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.4e-19 99.0 171 31.6
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 7.3e-15 85.5 71 50.7


User provided reference genes

Program Settings