Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026470 Vanilla planifolia HOM05D003192 ORTHO05D003596 1.9e-309 1065.1 575 100.0
HPP92_014211 Vanilla planifolia HOM05D003192 ORTHO05D003596 4.8e-159 565.5 355 89.6
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 6.6e-84 315.8 702 32.9
HPP92_014212 Vanilla planifolia HOM05D065724 ORTHO05D051545 1.9e-83 314.3 202 87.1
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.6e-82 311.2 622 35.7
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 2.0e-80 304.3 627 34.4
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 2.4e-73 280.8 645 32.9
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 4.5e-72 276.6 600 33.8
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 4.5e-72 276.6 600 33.7
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 8.4e-71 272.3 615 32.2
Actinidia02392 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.9e-70 271.2 541 35.1
Zm00001eb053540 Zea mays HOM05D003192 ORTHO05D003596 1.9e-70 271.2 617 31.3
Os03g0691500 Oryza sativa ssp. japonica HOM05D003192 ORTHO05D003596 3.2e-70 270.4 610 32.5
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.4e-70 269.6 581 33.2
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 1.6e-69 268.1 638 31.3
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 2.7e-69 267.3 575 32.3
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 3.0e-68 263.8 611 32.6
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 8.7e-68 262.3 607 31.3
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 1.9e-67 261.2 637 31.4
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 2.5e-67 260.8 623 32.4
PSO210G4022 Papaver somniferum HOM05D003192 ORTHO05D003596 4.8e-66 256.5 605 31.2
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.3e-65 253.1 581 32.5
SGA_v2.0_scaffold115G32126 Striga asiatica HOM05D003192 ORTHO05D003596 1.2e-64 251.9 598 32.8
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 2.6e-64 250.8 565 32.9
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 5.8e-64 249.6 581 32.5
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 9.9e-64 248.8 598 31.8
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 8.4e-63 245.7 530 32.5
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 8.4e-63 245.7 621 32.5
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 2.4e-62 244.2 606 32.0
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 2.4e-62 244.2 614 30.6
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 3.2e-62 243.8 521 32.6
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 4.2e-62 243.4 622 30.9
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 7.1e-62 242.7 600 31.0
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 9.3e-62 242.3 606 31.0
Zm00001eb217110 Zea mays HOM05D003192 ORTHO05D003596 9.3e-62 242.3 618 30.4
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 1.2e-61 241.9 612 31.4
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 1.2e-61 241.9 589 30.7
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 2.7e-61 240.7 632 29.4
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 3.5e-61 240.4 507 33.5
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 7.9e-61 239.2 620 30.8
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 1.0e-60 238.8 612 30.9
Sc08g0003910 Simmondsia chinensis HOM05D003192 ORTHO05D003596 1.0e-60 238.8 606 32.2
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 1.8e-60 238.0 604 31.0
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 3.0e-60 237.3 625 30.4
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 6.7e-60 236.1 619 31.0
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 1.1e-59 235.3 625 31.2
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.5e-59 235.0 607 30.8
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 1.9e-59 234.6 533 31.1
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 4.3e-59 233.4 583 30.5
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 4.3e-59 233.4 612 30.7
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 7.4e-59 232.6 537 34.8
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 9.6e-59 232.3 390 37.9
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 1.3e-58 231.9 587 32.0
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 2.1e-58 231.1 618 29.3
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 3.7e-58 230.3 614 29.8
PGSC0003DMG400037454 Solanum tuberosum HOM05D003192 ORTHO05D003596 4.8e-58 229.9 555 32.1
MD01G1039400 Malus domestica HOM05D003192 ORTHO05D003596 6.2e-58 229.6 565 30.8
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 8.1e-58 229.2 643 29.2
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 1.4e-57 228.4 530 30.4
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 1.8e-57 228.0 612 30.6
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 6.9e-57 226.1 600 29.7
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 2.6e-56 224.2 595 32.6
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 3.4e-56 223.8 615 28.6
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 4.5e-56 223.4 614 31.1
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 7.6e-56 222.6 618 29.0
ECA234G2607 Erigeron canadensis HOM05D003192 ORTHO05D003596 7.6e-56 222.6 563 31.6
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 1.3e-55 221.9 592 29.4
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 1.3e-55 221.9 625 29.6
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 1.7e-55 221.5 607 28.5
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.9e-55 220.7 600 30.7
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 6.5e-55 219.5 619 29.6
MSTRG.20280 Avicennia marina HOM05D003192 ORTHO05D003596 1.4e-54 218.4 566 32.2
Glyma.13G256600 Glycine max HOM05D003192 ORTHO05D003596 3.2e-54 217.2 610 31.5
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 7.1e-54 216.1 612 31.2
VMungo0299G0001 Vigna mungo HOM05D003192 ORTHO05D003596 3.5e-53 213.8 591 31.8
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 4.6e-53 213.4 580 31.9
SGA_v2.0_scaffold83G26376 Striga asiatica HOM05D003192 ORTHO05D003596 4.6e-53 213.4 505 32.5
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 6.0e-53 213.0 562 30.1
Atru.chr6.1263 Acer truncatum HOM05D003192 ORTHO05D003596 1.0e-52 212.2 533 31.0
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 1.0e-52 212.2 610 30.2
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.8e-52 211.5 568 32.2
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 2.3e-52 211.1 604 28.1
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 3.9e-52 210.3 605 30.9
PSO170G5608 Papaver somniferum HOM05D003192 ORTHO05D003596 6.7e-52 209.5 611 29.1
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 8.7e-52 209.1 619 27.8
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 1.1e-51 208.8 540 29.8
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 3.3e-51 207.2 613 29.2
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 4.3e-51 206.8 532 29.7
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 2.1e-50 204.5 532 29.3
Nitab4.5_0008998g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 2.8e-50 204.1 482 33.6
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 1.8e-49 201.4 600 30.5
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 1.8e-49 201.4 393 34.4
Phvul.006G201900 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 2.4e-49 201.1 555 31.2
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.5e-48 198.4 599 29.5
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 2.0e-48 198.0 463 31.7
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 5.9e-48 196.4 643 30.0
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 1.0e-47 195.7 612 30.2
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 1.3e-47 195.3 532 29.1
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 1.3e-47 195.3 644 28.4
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 1.3e-47 195.3 379 35.9
HanXRQChr10g0289971 Helianthus annuus HOM05D003192 ORTHO05D003596 2.2e-47 194.5 513 30.4
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 2.9e-47 194.1 400 33.2
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 3.8e-47 193.7 611 29.1
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 8.5e-47 192.6 488 31.6
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 1.9e-46 191.4 614 29.8
RcHm_v2.0_Chr6g0271001 Rosa chinensis HOM05D003192 ORTHO05D003596 3.2e-46 190.7 597 28.5
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 7.2e-46 189.5 600 27.7
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla HOM05D003192 ORTHO05D003596 7.2e-46 189.5 583 30.0
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 9.3e-46 189.1 600 30.2
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 9.3e-46 189.1 507 31.4
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 1.2e-45 188.7 547 30.7
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 1.2e-45 188.7 575 28.2
PSO063G1758 Papaver somniferum HOM05D003192 ORTHO05D003596 1.6e-45 188.3 505 30.1
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 2.7e-45 187.6 616 28.4
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 3.6e-45 187.2 585 31.1
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 4.6e-45 186.8 396 33.1
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 4.6e-45 186.8 622 28.0
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea HOM05D003192 ORTHO05D003596 7.9e-45 186.0 603 29.4
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 7.9e-45 186.0 585 29.6
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.0e-44 185.7 396 33.1
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.3e-44 185.3 625 28.3
PSO782G1877 Papaver somniferum HOM05D003192 ORTHO05D003596 1.8e-44 184.9 491 29.9
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 2.3e-44 184.5 613 26.9
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 2.3e-44 184.5 541 29.8
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 2.3e-44 184.5 461 32.3
SEGI_05807 Sequoiadendron giganteum HOM05D003192 ORTHO05D003596 3.9e-44 183.7 609 26.4
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 9.7e-43 179.1 396 32.6
Migut.K00798 Erythranthe guttata HOM05D003192 ORTHO05D003596 2.8e-42 177.6 725 26.6
Peaxi162Scf00003g00329 Petunia axillaris HOM05D003192 ORTHO05D003596 4.8e-42 176.8 495 29.7
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 1.8e-41 174.9 618 25.7
Psat1g214080 Pisum sativum HOM05D003192 ORTHO05D003596 2.4e-41 174.5 602 28.7
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 2.0e-40 171.4 593 28.5
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 2.6e-40 171.0 840 24.6
Manes.10G098500 Manihot esculenta HOM05D003192 ORTHO05D003596 3.4e-40 170.6 652 27.9
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 5.9e-40 169.9 594 29.1
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 1.7e-39 168.3 617 25.8
Lalb_Chr20g0122921 Lupinus albus HOM05D003192 ORTHO05D003596 1.7e-39 168.3 538 29.7
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.9e-38 164.9 410 30.0
ATR0767G239 Amborella trichopoda HOM05D003192 ORTHO05D003596 1.8e-36 158.3 664 27.0
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 1.8e-36 158.3 568 25.5
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 2.6e-35 154.5 416 29.8
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 3.3e-35 154.1 442 27.6
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 2.8e-34 151.0 612 26.3
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 3.7e-34 150.6 422 28.9
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 8.2e-34 149.4 568 25.4
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 8.2e-34 149.4 300 33.7
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 1.8e-33 148.3 568 28.7
Medtr8g471150 Medicago truncatula HOM05D003192 ORTHO05D003596 9.1e-33 146.0 586 25.3
DCAR_021912 Daucus carota HOM05D003192 ORTHO05D003596 3.4e-32 144.1 574 26.1
Lj6g0024173 Lotus japonicus HOM05D003192 ORTHO05D003596 7.7e-32 142.9 554 27.3
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 6.5e-31 139.8 301 32.9
Oeu063542.1 Olea europaea HOM05D003192 ORTHO05D003596 6.5e-31 139.8 440 28.9
FvH4_2g11711 Fragaria vesca HOM05D003192 ORTHO05D003596 8.5e-31 139.4 599 26.4
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 1.1e-30 139.0 597 24.0
AUR62017973 Chenopodium quinoa HOM05D003192 ORTHO05D003596 5.5e-30 136.7 340 32.4
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 7.9e-29 132.9 334 31.4
Lalb_Chr05g0228511 Lupinus albus HOM05D003192 ORTHO05D003596 1.7e-26 125.2 679 23.6
Ah.01g023960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.8e-26 124.4 558 26.3
ECA238G4297 Erigeron canadensis HOM05D003192 ORTHO05D003596 6.3e-26 123.2 615 25.0
Lsat_1_v5_gn_5_109820 Lactuca sativa HOM05D003192 ORTHO05D003596 6.3e-26 123.2 403 27.8
HanXRQChr11g0346961 Helianthus annuus HOM05D003192 ORTHO05D003596 6.5e-23 113.2 567 25.4
Ca_22705_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 1.5e-22 112.1 538 24.3
Ah.03g139960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.1e-21 108.2 425 27.3
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 1.8e-20 105.1 321 30.5
EL10Ac6g15204 Beta vulgaris HOM05D003192 ORTHO05D003596 8.8e-20 102.8 336 29.5
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.3e-18 99.0 240 30.0
ECA233G2454 Erigeron canadensis HOM05D000169 ORTHO05D003596 2.2e-18 98.2 596 24.5
Lj2P534T21 Lonicera japonica HOM05D003192 ORTHO05D003596 7.7e-16 89.7 198 34.3
Dinv20194 Davidia involucrata HOM05D003192 ORTHO05D003596 1.3e-15 89.0 191 35.1
Lsat_1_v5_gn_2_70360 Lactuca sativa HOM05D003192 ORTHO05D003596 2.2e-15 88.2 551 20.9
Lalb_Chr05g0216371 Lupinus albus HOM05D003192 ORTHO05D003596 2.9e-15 87.8 421 26.1
Mapoly0094s0016 Marchantia polymorpha HOM05D003192 ORTHO05D003596 2.5e-14 84.7 419 25.8
Medtr5g032080 Medicago truncatula HOM05D003192 ORTHO05D003596 7.2e-14 83.2 475 22.5
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 1.2e-13 82.4 482 22.0
AUR62003664 Chenopodium quinoa HOM05D003192 ORTHO05D003596 8.8e-12 76.3 340 26.5
Ah.02g123570 Amaranthus hybridus HOM05D003192 ORTHO05D003596 1.3e-10 72.4 310 26.1
FAN23G2642 Fragaria x ananassa HOM05D003192 ORTHO05D003596 6.3e-10 70.1 119 37.0
BcaB03g12312 Brassica carinata HOM05D003192 ORTHO05D003596 1.4e-09 68.9 100 39.0
TPR.G39012 Trifolium pratense HOM05D003192 ORTHO05D003596 5.4e-09 67.0 518 23.6
Glyma.17G184550 Glycine max HOM05D003192 ORTHO05D003596 9.1e-09 66.2 265 27.9
Atru.chr6.1256 Acer truncatum HOM05D003192 ORTHO05D003596 2.3e-07 61.6 138 28.3
Lj2P534T19 Lonicera japonica HOM05D003192 ORTHO05D003596 6.5e-07 60.1 129 30.2
Dinv36931 Davidia involucrata HOM05D003192 ORTHO05D003596 1.1e-06 59.3 193 29.0
arahy.Tifrunner.gnm1.ann1.ND4N8X Arachis hypogaea HOM05D003192 ORTHO05D003596 3.2e-06 57.8 513 22.6
arahy.Tifrunner.gnm1.ann1.QT15T4 Arachis hypogaea HOM05D003192 ORTHO05D003596 3.2e-06 57.8 513 22.6
Actinidia30717 Actinidia chinensis HOM05D003192 ORTHO05D003596 5.5e-06 57.0 109 36.7


User provided reference genes

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