Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 0.0e+00 1090.1 641 100.0
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 3.2e-297 1024.6 616 99.0
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.1e-87 328.6 641 39.0
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 6.7e-85 319.3 631 48.7
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 1.9e-84 317.8 616 41.4
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 2.1e-83 314.3 633 39.2
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 4.8e-83 313.2 621 43.2
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 1.4e-82 311.6 618 41.1
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.5e-81 308.1 621 40.7
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.5e-81 308.1 525 43.0
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 2.2e-80 304.3 634 40.1
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 2.9e-80 303.9 606 48.3
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 4.9e-80 303.1 578 47.6
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 7.1e-79 299.3 521 44.7
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.6e-78 298.1 520 42.9
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.7e-78 297.4 600 48.5
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.5e-78 297.0 532 46.8
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 3.5e-78 297.0 536 46.3
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 4.6e-78 296.6 521 42.0
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 1.0e-77 295.4 638 41.5
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 1.8e-77 294.7 520 49.8
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 5.1e-77 293.1 502 41.2
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 6.7e-77 292.7 627 41.6
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 6.7e-77 292.7 618 41.1
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.1e-76 292.0 456 45.4
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 1.1e-76 292.0 485 43.5
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 1.5e-76 291.6 556 50.7
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.9e-76 291.2 457 43.8
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 3.3e-76 290.4 597 44.7
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 5.7e-76 289.7 515 42.3
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 7.4e-76 289.3 499 41.1
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 1.3e-75 288.5 621 44.9
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.3e-75 288.5 484 42.6
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 1.3e-75 288.5 605 38.5
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 1.6e-75 288.1 512 40.6
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.2e-75 287.7 616 38.6
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 8.2e-75 285.8 532 44.4
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 1.1e-74 285.4 513 41.9
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 1.4e-74 285.0 512 40.4
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 2.4e-74 284.3 622 44.7
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 3.1e-74 283.9 631 41.4
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 3.1e-74 283.9 534 46.1
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.3e-74 283.1 484 42.4
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 5.3e-74 283.1 609 38.1
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 9.0e-74 282.3 599 37.6
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 9.0e-74 282.3 512 40.6
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 2.0e-73 281.2 621 40.7
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 3.4e-73 280.4 604 37.3
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 3.4e-73 280.4 495 39.4
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 5.9e-73 279.6 614 37.6
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 1.0e-72 278.9 652 45.1
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 1.3e-72 278.5 526 51.1
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 1.3e-72 278.5 502 41.2
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 2.2e-72 277.7 524 50.0
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 3.8e-72 276.9 606 46.0
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 5.0e-72 276.6 585 37.6
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 5.0e-72 276.6 502 52.8
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.9e-71 274.6 481 50.7
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 1.9e-71 274.6 457 52.7
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 2.5e-71 274.2 497 47.5
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 7.2e-71 272.7 592 42.1
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 2.7e-70 270.8 604 44.0
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 2.7e-70 270.8 544 49.3
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 6.1e-70 269.6 537 47.5
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.4e-69 268.5 521 40.7
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 1.8e-69 268.1 512 50.2
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 1.8e-69 268.1 600 37.8
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 1.8e-69 268.1 613 44.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.8e-69 268.1 517 40.6
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 1.8e-69 268.1 547 39.5
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 2.3e-69 267.7 412 49.8
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 3.9e-69 266.9 609 36.9
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 3.9e-69 266.9 523 41.3
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 5.1e-69 266.5 465 41.3
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 5.1e-69 266.5 536 47.4
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.5e-68 265.0 522 41.0
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 1.5e-68 265.0 502 39.4
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 7.4e-68 262.7 460 43.9
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 1.7e-67 261.5 600 45.0
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.2e-67 261.2 522 40.6
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 2.2e-67 261.2 499 40.9
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 1.4e-66 258.5 639 43.2
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 5.3e-66 256.5 427 42.9
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 6.9e-66 256.1 618 36.2
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 1.5e-65 255.0 597 43.7
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 3.4e-65 253.8 486 43.2
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 1.7e-64 251.5 596 40.8
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 2.9e-64 250.8 499 48.3
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 3.8e-64 250.4 642 41.6
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.5e-64 249.6 636 39.9
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.1e-63 248.8 618 40.8
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 1.9e-63 248.1 613 41.9
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.9e-63 248.1 613 34.7
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.2e-63 247.3 609 42.4
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 4.2e-63 246.9 591 37.6
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 1.2e-62 245.4 485 48.5
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 2.7e-62 244.2 586 35.3
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 2.7e-62 244.2 481 38.0
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 7.9e-62 242.7 490 49.6
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 7.9e-62 242.7 496 45.0
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 1.4e-61 241.9 501 43.7
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 3.0e-61 240.7 356 51.7
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 3.0e-61 240.7 581 45.4
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 5.1e-61 240.0 488 48.4
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 5.1e-61 240.0 609 34.6
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 2.6e-60 237.7 595 42.4
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 5.7e-60 236.5 619 41.5
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 9.7e-60 235.7 643 38.9
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 9.7e-60 235.7 471 43.9
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 1.3e-59 235.3 490 46.3
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.3e-59 235.3 714 32.8
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 2.8e-59 234.2 625 43.2
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 1.1e-58 232.3 513 36.6
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 1.4e-58 231.9 452 38.9
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 7.0e-58 229.6 616 39.9
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 2.6e-57 227.6 531 43.7
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 5.0e-56 223.4 633 41.2
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.1e-55 222.2 623 41.7
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 1.5e-55 221.9 498 45.0
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 3.2e-55 220.7 544 34.7
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 5.5e-55 219.9 636 41.2
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 7.2e-55 219.5 484 45.0
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 1.0e-53 215.7 489 44.4
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 3.3e-52 210.7 601 42.1
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.3e-51 208.8 449 44.5
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 3.8e-48 197.2 602 40.4
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 1.5e-47 195.3 343 51.0
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 2.7e-46 191.0 291 43.0
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 8.0e-46 189.5 423 44.4
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 6.8e-45 186.4 550 35.8
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.2e-41 175.6 333 50.5
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 1.0e-40 172.6 573 32.1
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 7.2e-39 166.4 790 27.6
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 2.1e-38 164.9 243 46.5
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.5e-36 158.7 216 48.1
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.9e-31 141.7 387 46.3
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 2.1e-30 138.3 121 61.2
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 2.8e-30 137.9 100 69.0
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.2e-28 132.5 411 28.7
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 4.4e-28 130.6 413 29.3
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 2.4e-26 124.8 100 64.0
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.6e-25 122.1 545 29.0
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 2.7e-25 121.3 101 65.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.3e-24 119.0 386 30.1
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 1.8e-21 108.6 355 33.8
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 3.1e-21 107.8 94 62.8
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 7.5e-20 103.2 526 27.9
Actinidia11385 Actinidia chinensis HOM05D003628 ORTHO05D004253 1.4e-18 99.0 75 74.7
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.0e-16 91.3 204 41.7
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.1e-15 89.4 74 63.5
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.1e-14 85.1 62 69.4
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.2e-14 83.6 68 63.2
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 1.1e-13 82.8 105 48.6
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.8e-13 82.0 426 24.9
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 2.9e-11 74.7 257 33.1
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.1e-10 70.9 49 73.5
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.1e-10 70.9 49 73.5
SHI00869 Sapria himalayana HOM05D003628 ORTHO05D004253 7.8e-09 66.6 76 53.9
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.5e-07 62.4 89 42.7
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 2.5e-07 61.6 43 69.8
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.3e-07 61.2 38 78.9
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 5.6e-07 60.5 38 76.3
MBI04_g25319_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 7.3e-07 60.1 82 47.6
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 9.5e-07 59.7 38 76.3
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.2e-06 59.3 40 72.5
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.6e-06 58.9 38 73.7
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.6e-06 58.9 46 65.2
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.1e-06 58.5 46 63.0
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 2.1e-06 58.5 35 80.0
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.7e-06 57.4 38 71.1
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 4.7e-06 57.4 46 63.0
Gohir.D06G084232 Gossypium hirsutum HOM05D003628 ORTHO05D016264 6.2e-06 57.0 35 77.1
PGSC0003DMG402011586 Solanum tuberosum HOM05D003628 ORTHO05D004253 6.2e-06 57.0 50 62.0
Oeu023150.1 Olea europaea HOM05D003628 ORTHO05D004253 8.1e-06 56.6 43 65.1


User provided reference genes

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