Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026305 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.1e-133 479.9 235 100.0
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 6.7e-59 231.5 242 49.6
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 8.8e-59 231.1 236 51.3
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 1.1e-58 230.7 243 51.0
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 5.7e-58 228.4 240 47.9
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 5.7e-58 228.4 241 48.1
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 9.7e-58 227.6 240 48.3
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 9.7e-58 227.6 241 48.5
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.3e-57 227.3 240 47.9
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 1.3e-57 227.3 241 48.1
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 1.7e-57 226.9 240 49.2
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 1.7e-57 226.9 245 46.9
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 1.7e-57 226.9 240 49.6
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.7e-57 226.9 240 49.2
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 2.2e-57 226.5 240 48.8
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 2.2e-57 226.5 237 49.8
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 2.2e-57 226.5 240 50.0
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 2.2e-57 226.5 242 49.6
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 2.2e-57 226.5 240 49.2
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 2.8e-57 226.1 240 48.8
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 2.8e-57 226.1 240 48.8
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 2.8e-57 226.1 243 49.8
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 3.7e-57 225.7 240 48.8
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 4.8e-57 225.3 240 48.8
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 6.3e-57 224.9 237 48.1
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 8.2e-57 224.6 240 47.9
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 8.2e-57 224.6 237 50.2
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 1.1e-56 224.2 240 49.2
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.1e-56 224.2 240 47.9
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 1.1e-56 224.2 240 48.8
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 1.1e-56 224.2 240 48.3
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 1.4e-56 223.8 233 48.5
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 2.4e-56 223.0 240 49.6
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 2.4e-56 223.0 240 48.8
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 2.4e-56 223.0 240 47.5
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 2.4e-56 223.0 240 47.9
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 2.4e-56 223.0 241 49.8
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 2.4e-56 223.0 237 48.5
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 3.1e-56 222.6 240 47.1
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 4.1e-56 222.2 241 47.7
FAN05G3283 Fragaria x ananassa HOM05D005576 ORTHO05D007010 4.1e-56 222.2 240 47.1
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 4.1e-56 222.2 240 48.3
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 4.1e-56 222.2 249 45.4
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 4.1e-56 222.2 239 50.2
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 5.3e-56 221.9 240 47.5
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 6.9e-56 221.5 239 48.1
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 6.9e-56 221.5 237 49.4
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 9.1e-56 221.1 241 47.7
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.2e-55 220.7 240 46.2
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 1.2e-55 220.7 239 48.5
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 1.2e-55 220.7 239 49.0
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.5e-55 220.3 239 47.7
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 1.5e-55 220.3 238 47.9
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 1.5e-55 220.3 234 49.1
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 2.0e-55 219.9 239 46.9
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 2.0e-55 219.9 239 48.1
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 2.0e-55 219.9 240 47.1
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 2.0e-55 219.9 237 47.7
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 2.6e-55 219.5 239 47.7
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 2.6e-55 219.5 239 47.7
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 2.6e-55 219.5 240 47.5
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 3.4e-55 219.2 239 47.3
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 4.5e-55 218.8 239 48.5
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 4.5e-55 218.8 239 47.3
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 4.5e-55 218.8 239 47.3
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 5.9e-55 218.4 240 47.9
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 5.9e-55 218.4 239 47.3
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 7.7e-55 218.0 239 47.3
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 7.7e-55 218.0 237 48.9
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 7.7e-55 218.0 240 47.1
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 7.7e-55 218.0 239 47.3
Cpa.g.sc589.4 Carica papaya HOM05D005576 ORTHO05D007010 1.0e-54 217.6 240 47.5
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.0e-54 217.6 240 46.2
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.0e-54 217.6 240 46.2
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 1.3e-54 217.2 239 46.9
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 1.3e-54 217.2 237 47.7
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 1.7e-54 216.9 242 46.3
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.7e-54 216.9 242 46.7
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 1.7e-54 216.9 240 47.9
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 2.2e-54 216.5 244 47.1
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 2.2e-54 216.5 241 47.7
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 3.8e-54 215.7 239 47.3
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 6.5e-54 214.9 241 46.9
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 8.5e-54 214.5 241 47.7
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 1.1e-53 214.2 240 46.7
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 1.4e-53 213.8 239 46.4
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 1.4e-53 213.8 240 48.8
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.9e-53 213.4 236 50.0
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 2.5e-53 213.0 241 46.9
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 2.5e-53 213.0 239 47.3
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 3.2e-53 212.6 241 46.9
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 3.2e-53 212.6 241 46.9
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 4.2e-53 212.2 236 49.6
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 9.4e-53 211.1 236 47.9
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 9.4e-53 211.1 238 50.0
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 2.7e-52 209.5 243 43.2
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 3.6e-52 209.1 244 45.1
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 3.6e-52 209.1 244 45.1
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 4.7e-52 208.8 243 43.2
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 1.0e-51 207.6 232 47.0
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 2.3e-51 206.5 242 45.0
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 3.0e-51 206.1 243 42.8
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 3.9e-51 205.7 244 45.5
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 5.1e-51 205.3 243 45.3
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 5.1e-51 205.3 243 45.3
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 8.8e-51 204.5 243 46.5
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 8.8e-51 204.5 237 44.7
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 1.1e-50 204.1 240 46.2
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 1.5e-50 203.8 239 45.2
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 9.1e-48 194.5 244 42.2
Actinidia26823 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.5e-47 192.2 239 44.8
Actinidia27734 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.5e-47 192.2 239 44.8
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 2.9e-46 189.5 240 42.9
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 1.1e-40 171.0 234 41.0
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 1.0e-38 164.5 238 41.6
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.1e-37 161.0 131 58.8
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 8.8e-35 151.4 294 35.0
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 1.2e-31 141.0 157 45.2
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 2.7e-28 129.8 232 35.8
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 2.2e-25 120.2 215 34.0
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 3.5e-23 112.8 264 32.6
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 6.1e-20 102.1 86 50.0
unitig_899.g14765 Utricularia gibba HOM05D005576 ORTHO05D007010 1.8e-11 73.9 92 41.3


User provided reference genes

Program Settings