Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026302 Vanilla planifolia HOM05D008087 ORTHO05D010187 1.6e-104 382.9 209 100.0
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 1.0e-21 107.8 197 39.6
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 2.2e-21 106.7 181 40.9
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 1.1e-20 104.4 175 39.4
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 3.2e-20 102.8 198 38.4
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 4.2e-20 102.4 198 38.4
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 4.2e-20 102.4 198 37.4
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 7.1e-20 101.7 179 36.3
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 1.2e-19 100.9 197 38.6
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 1.2e-19 100.9 198 37.4
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 1.6e-19 100.5 183 36.6
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 1.6e-19 100.5 201 36.3
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 2.1e-19 100.1 179 36.9
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 2.1e-19 100.1 198 37.4
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 4.6e-19 99.0 196 37.2
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 4.6e-19 99.0 198 38.4
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 6.0e-19 98.6 168 37.5
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 7.9e-19 98.2 197 37.6
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 1.0e-18 97.8 197 35.0
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 1.0e-18 97.8 198 36.9
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 1.0e-18 97.8 199 37.7
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 1.3e-18 97.4 202 34.7
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 1.3e-18 97.4 179 36.9
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 1.3e-18 97.4 180 37.8
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 1.3e-18 97.4 178 35.4
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 2.3e-18 96.7 201 35.3
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 3.0e-18 96.3 175 38.9
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 3.9e-18 95.9 200 37.0
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 3.9e-18 95.9 201 35.3
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 3.9e-18 95.9 201 33.8
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 5.1e-18 95.5 171 38.6
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 6.7e-18 95.1 179 35.2
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 6.7e-18 95.1 197 35.5
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 8.7e-18 94.7 203 37.9
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 1.1e-17 94.4 171 37.4
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 1.1e-17 94.4 201 33.3
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 1.1e-17 94.4 201 34.8
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 1.5e-17 94.0 179 34.6
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 1.9e-17 93.6 178 36.5
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 1.9e-17 93.6 201 33.3
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 2.5e-17 93.2 181 32.0
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 4.3e-17 92.4 189 37.6
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 7.4e-17 91.7 198 34.3
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 7.4e-17 91.7 201 31.8
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 1.6e-16 90.5 178 34.8
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 2.1e-16 90.1 199 35.7
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 2.1e-16 90.1 198 34.8
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 2.1e-16 90.1 178 34.3
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 6.2e-16 88.6 201 33.3
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 8.2e-16 88.2 199 33.7
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 2.4e-15 86.7 201 32.8
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 4.0e-15 85.9 198 35.4
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 6.9e-15 85.1 199 35.2
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 4.5e-14 82.4 152 34.9
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 3.8e-13 79.3 197 32.5
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 2.5e-12 76.6 189 33.9
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 1.2e-11 74.3 159 35.8
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.7e-11 73.2 172 34.9
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.0e-10 71.2 198 32.8
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 1.8e-10 70.5 199 36.2
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 2.3e-10 70.1 154 36.4
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 2.3e-10 70.1 169 35.5
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 1.5e-09 67.4 197 33.5
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 7.4e-09 65.1 165 29.7


User provided reference genes

Program Settings