Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_026075 Vanilla planifolia HOM05D000072 ORTHO05D016399 8.0e-160 567.0 279 100.0
Os01g0113200 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 2.2e-24 117.1 251 33.5
Os01g0115900 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D016399 1.6e-22 110.9 271 32.8
Zm00001eb419180 Zea mays HOM05D000072 ORTHO05D000026 7.8e-22 108.6 278 33.5
Zm00001eb334730 Zea mays HOM05D000072 ORTHO05D000026 8.6e-21 105.1 270 30.7
Zm00001eb334670 Zea mays HOM05D000072 ORTHO05D000026 1.1e-20 104.8 270 31.5
Zm00001eb334680 Zea mays HOM05D000072 ORTHO05D000026 1.1e-20 104.8 279 30.8
Zm00001eb334650 Zea mays HOM05D000072 ORTHO05D000026 9.5e-20 101.7 282 30.9
Os01g0115600 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 3.6e-19 99.8 265 32.8
Os01g0113800 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 5.2e-18 95.9 288 32.6
Rhsim12G0087300 Rhododendron simsii HOM05D000072 ORTHO05D000026 5.2e-18 95.9 271 29.2
Os01g0113500 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 4.4e-17 92.8 267 29.6
Ciclev10016432m.g Citrus clementina HOM05D000354 ORTHO05D016399 9.9e-17 91.7 272 25.0
Zm00001eb334620 Zea mays HOM05D000072 ORTHO05D000026 4.9e-16 89.4 252 29.0
CSS0034281 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 7.1e-15 85.5 259 30.1
Ciclev10017919m.g Citrus clementina HOM05D000354 ORTHO05D016399 7.1e-15 85.5 269 26.0
Atru.chr2.3092 Acer truncatum HOM05D000354 ORTHO05D016399 2.1e-14 84.0 232 31.0
CSS0049862 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.3e-13 81.3 242 28.5
Atru.chr2.3095 Acer truncatum HOM05D000072 ORTHO05D016399 1.7e-13 80.9 234 29.1
Ciclev10014602m.g Citrus clementina HOM05D000072 ORTHO05D000026 8.6e-13 78.6 264 26.5
Ciclev10017569m.g Citrus clementina HOM05D000354 ORTHO05D016399 3.3e-12 76.6 172 32.6
Ciclev10017594m.g Citrus clementina HOM05D000354 ORTHO05D016399 3.3e-12 76.6 272 26.8
Os01g0117700 Oryza sativa ssp. japonica HOM05D000072 ORTHO05D000026 5.6e-12 75.9 239 31.8
ATR1125G048 Amborella trichopoda HOM05D000260 ORTHO05D004405 7.6e-09 65.5 234 27.8
Ciclev10017870m.g Citrus clementina HOM05D000354 ORTHO05D016399 2.2e-08 63.9 142 28.2
FAN06G1829 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.6e-06 57.8 145 32.4
Haze_12330 Corylus avellana HOM05D000354 ORTHO05D000717 6.0e-06 55.8 192 30.2
Lalb_Chr11g0066771 Lupinus albus HOM05D000354 ORTHO05D000717 6.0e-06 55.8 225 26.7


User provided reference genes

Program Settings