Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 9.5e-105 383.6 212 100.0
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.0e-61 240.7 227 63.9
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 8.4e-61 237.7 232 62.9
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 2.5e-60 236.1 223 62.3
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 1.2e-59 233.8 227 63.0
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 2.7e-59 232.6 229 62.9
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 2.3e-58 229.6 227 60.8
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 3.9e-58 228.8 227 60.4
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 6.7e-58 228.0 227 60.4
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 8.7e-58 227.6 227 60.8
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 1.5e-57 226.9 230 62.2
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 4.3e-57 225.3 227 61.7
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.6e-56 223.4 233 60.9
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 3.7e-56 222.2 233 59.2
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.1e-55 220.7 227 61.7
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.1e-55 220.7 227 61.7
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 2.4e-55 219.5 229 59.8
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 9.0e-55 217.6 227 59.0
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 1.2e-54 217.2 228 59.6
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 1.2e-54 217.2 227 59.5
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 1.5e-54 216.9 227 59.9
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 2.0e-54 216.5 227 60.8
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 2.2e-53 213.0 227 59.9
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 2.2e-53 213.0 231 60.6
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 3.8e-53 212.2 230 56.5
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 1.4e-52 210.3 232 56.9
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 1.4e-52 210.3 232 57.3
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 3.2e-52 209.1 233 57.9
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 5.5e-52 208.4 232 57.8
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 5.5e-52 208.4 227 58.1
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 1.0e-50 204.1 230 57.8
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 1.8e-50 203.4 227 58.1
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 2.3e-50 203.0 227 55.9
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 3.0e-50 202.6 227 57.7
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 5.1e-50 201.8 227 55.9
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 1.5e-49 200.3 232 56.5
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 2.5e-49 199.5 232 57.8
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 2.5e-49 199.5 227 54.6
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 3.3e-49 199.1 230 56.1
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 9.7e-49 197.6 227 57.7
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 1.7e-48 196.8 230 53.9
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 2.8e-48 196.1 227 56.4
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 2.8e-48 196.1 231 55.4
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 4.8e-48 195.3 233 56.2
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 4.8e-48 195.3 227 52.9
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 6.3e-48 194.9 227 56.8
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.1e-47 194.1 152 71.1
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 1.1e-47 194.1 227 52.4
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 9.1e-47 191.0 232 54.3
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 1.2e-46 190.7 226 54.4
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 2.0e-46 189.9 227 54.6
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 5.9e-46 188.3 227 53.3
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 5.9e-46 188.3 223 52.5
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.3e-45 187.2 226 52.7
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 2.9e-45 186.0 231 53.7
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 2.9e-45 186.0 227 53.3
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 6.5e-45 184.9 227 53.3
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 4.2e-44 182.2 223 53.8
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 7.2e-44 181.4 230 53.9
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 2.1e-43 179.9 227 49.8
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 2.7e-43 179.5 231 52.4
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 2.7e-43 179.5 223 53.4
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 6.1e-43 178.3 233 50.6
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 7.9e-43 177.9 230 48.7
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 7.9e-43 177.9 233 49.8
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 7.9e-43 177.9 227 52.9
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 1.4e-42 177.2 227 51.5
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 1.8e-42 176.8 228 47.8
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.0e-42 176.0 226 50.0
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 5.1e-42 175.3 230 49.1
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 8.8e-42 174.5 227 52.0
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 8.8e-42 174.5 227 49.8
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 1.5e-41 173.7 248 48.0
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 2.6e-41 172.9 227 49.8
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 4.4e-41 172.2 223 49.3
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 4.4e-41 172.2 233 51.9
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 7.4e-41 171.4 228 50.4
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 1.3e-40 170.6 227 48.5
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 1.3e-40 170.6 230 52.2
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 1.7e-40 170.2 227 50.2
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 2.8e-40 169.5 227 52.9
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 3.7e-40 169.1 227 48.0
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 3.7e-40 169.1 227 50.7
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.7e-40 169.1 227 49.3
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 4.8e-40 168.7 227 50.2
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 6.3e-40 168.3 232 49.6
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 6.3e-40 168.3 231 50.6
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 6.3e-40 168.3 263 47.5
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 6.3e-40 168.3 227 51.1
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 8.2e-40 167.9 248 46.8
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 1.8e-39 166.8 231 49.8
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 3.1e-39 166.0 227 50.7
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 5.3e-39 165.2 228 49.1
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 7.0e-39 164.9 226 50.0
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 1.2e-38 164.1 226 50.0
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 2.6e-38 162.9 227 48.9
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 4.5e-38 162.2 228 46.1
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 7.7e-38 161.4 227 50.7
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 1.0e-37 161.0 227 50.2
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 2.2e-37 159.8 236 49.6
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 4.2e-36 155.6 96 79.2
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 5.5e-36 155.2 228 45.6
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 7.2e-36 154.8 224 47.8
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 9.4e-36 154.5 227 47.6
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 9.4e-36 154.5 228 45.6
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 2.7e-35 152.9 230 47.8
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 3.0e-34 149.4 227 45.8
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 4.0e-34 149.1 227 45.8
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 6.7e-34 148.3 227 44.1
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 2.6e-33 146.4 227 45.4
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 2.6e-33 146.4 227 45.4
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 5.7e-33 145.2 227 44.9
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 9.7e-33 144.4 331 37.8
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 2.3e-26 123.2 229 44.5
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 4.0e-26 122.5 189 45.0
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 4.4e-25 119.0 212 41.0
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 1.8e-23 113.6 96 59.4
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 4.1e-23 112.5 212 43.4
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 9.1e-23 111.3 56 91.1
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 1.5e-20 104.0 106 59.4
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 3.2e-20 102.8 195 41.0
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 4.7e-19 99.0 69 73.9
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 7.5e-17 91.7 214 39.3
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 2.8e-16 89.7 207 36.7
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.1e-15 87.8 208 37.5
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 9.2e-15 84.7 226 36.7
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 4.5e-14 82.4 207 35.3
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 5.6e-12 75.5 166 38.6
PSO541G1702 Papaver somniferum HOM05D006255 ORTHO05D008014 1.3e-08 64.3 162 38.9
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 7.8e-06 55.1 53 54.7


User provided reference genes

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