Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 4.4e-214 747.7 372 100.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 3.1e-167 592.0 367 77.9
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 7.6e-166 587.4 368 78.0
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.3e-165 586.6 366 76.8
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.2e-165 585.9 371 76.8
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.2e-165 585.9 368 77.7
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 3.2e-164 582.0 368 77.2
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 4.2e-164 581.6 364 78.0
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 5.5e-164 581.3 365 77.8
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 7.1e-164 580.9 369 77.5
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.6e-163 579.7 364 78.0
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 2.1e-163 579.3 367 76.8
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.7e-163 578.9 368 76.9
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 3.5e-163 578.6 368 76.1
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 6.0e-163 577.8 364 76.6
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 7.9e-163 577.4 367 76.3
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 1.0e-162 577.0 368 75.5
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.3e-162 576.6 367 76.0
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.8e-162 576.2 372 74.7
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 2.3e-162 575.9 368 75.3
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 3.9e-162 575.1 367 76.3
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 6.7e-162 574.3 368 76.1
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.1e-161 573.5 368 75.0
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 2.5e-161 572.4 369 75.6
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 4.3e-161 571.6 363 76.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 7.4e-161 570.9 367 76.0
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 7.4e-161 570.9 368 74.7
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 9.6e-161 570.5 369 75.6
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.3e-160 570.1 365 75.6
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.3e-160 570.1 364 76.4
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.3e-160 570.1 365 74.8
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 8.2e-160 567.4 367 74.7
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.1e-159 567.0 364 75.8
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.4e-159 566.6 366 74.0
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 3.1e-159 565.5 365 75.9
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 6.9e-159 564.3 367 74.7
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 9.0e-159 563.9 365 75.9
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.5e-158 563.1 367 75.7
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.6e-158 562.4 363 75.5
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 2.6e-158 562.4 365 75.3
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 2.6e-158 562.4 366 73.5
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 4.5e-158 561.6 364 73.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 5.9e-158 561.2 370 74.9
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 7.6e-158 560.8 368 72.6
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 7.6e-158 560.8 364 74.5
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 1.3e-157 560.1 367 73.0
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 2.2e-157 559.3 364 74.2
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 5.0e-157 558.1 364 75.5
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 6.5e-157 557.8 366 74.3
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.1e-156 557.0 364 74.7
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 3.2e-156 555.4 366 74.0
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.2e-156 555.4 365 72.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.2e-156 555.1 365 74.5
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.1e-155 552.7 365 74.0
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.7e-155 552.4 368 73.1
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 4.6e-155 551.6 364 73.4
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 4.6e-155 551.6 368 73.1
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 4.6e-155 551.6 363 74.1
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 7.9e-155 550.8 368 73.1
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 1.0e-154 550.4 368 71.7
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.3e-154 550.1 363 74.1
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.3e-154 550.1 357 74.5
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 1.3e-154 550.1 374 73.0
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 3.9e-154 548.5 368 72.6
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 8.7e-154 547.4 378 70.6
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 8.7e-154 547.4 379 70.7
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 1.5e-153 546.6 363 73.6
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 2.5e-153 545.8 363 73.6
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 4.3e-153 545.0 366 72.7
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 4.3e-153 545.0 364 73.4
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.3e-152 543.5 363 73.6
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.6e-152 543.1 363 73.0
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 4.8e-152 541.6 401 69.3
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.4e-151 540.0 366 71.6
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.4e-151 539.3 363 73.3
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 3.1e-151 538.9 360 73.3
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 9.0e-151 537.3 363 71.9
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 2.6e-150 535.8 376 68.9
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 5.9e-150 534.6 378 70.9
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.2e-147 526.9 370 71.1
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.5e-145 520.0 332 76.5
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.7e-144 516.5 369 69.6
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 2.8e-144 515.8 368 70.1
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 5.3e-143 511.5 366 67.8
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.9e-142 508.1 357 70.6
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.3e-137 492.3 368 65.2
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 4.1e-135 485.3 369 64.0
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 9.1e-135 484.2 301 78.7
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 8.5e-133 477.6 285 80.7
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 7.2e-132 474.6 364 64.6
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 2.1e-131 473.0 365 64.4
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 3.0e-130 469.2 285 78.9
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 2.8e-128 462.6 308 74.0
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 2.5e-124 449.5 268 81.0
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.7e-120 436.8 270 78.1
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.3e-109 400.6 242 79.8
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 2.6e-105 386.3 229 81.7
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.7e-101 373.6 334 58.7
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.5e-97 360.5 228 74.1
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 8.3e-96 354.8 223 75.3
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 9.6e-68 261.5 180 69.4
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 8.1e-67 258.5 214 63.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 4.2e-39 166.4 116 67.2
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 3.9e-37 159.8 127 59.8
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.3e-35 154.8 125 63.2
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.1e-34 150.2 123 63.4
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.5e-33 147.9 123 63.4
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-33 147.5 112 66.1
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-33 147.5 112 66.1
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.0e-32 145.2 123 63.4
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.6e-28 130.6 100 66.0
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 5.9e-25 119.4 111 56.8
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.0e-16 92.0 87 56.3
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.3e-11 75.1 54 66.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 2.2e-11 74.3 54 64.8
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 4.8e-11 73.2 54 64.8
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.2e-09 68.6 54 61.1
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 7.7e-09 65.9 55 58.2
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 1.9e-07 61.2 34 85.3
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 4.2e-07 60.1 224 25.9
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 7.2e-07 59.3 279 24.4


User provided reference genes

Program Settings