Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 3.5e-37 157.9 87 100.0
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 7.1e-14 80.5 86 55.8
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 1.2e-13 79.7 66 63.6
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 1.2e-13 79.7 78 60.3
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.2e-13 79.7 78 60.3
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 1.6e-13 79.3 78 60.3
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 4.6e-13 77.8 66 60.6
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 6.0e-13 77.4 66 60.6
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 6.0e-13 77.4 66 60.6
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 6.0e-13 77.4 66 62.1
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 6.0e-13 77.4 66 60.6
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 6.0e-13 77.4 68 63.2
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 1.3e-12 76.3 66 59.1
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 1.7e-12 75.9 66 59.1
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 3.0e-12 75.1 86 52.3
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 3.9e-12 74.7 66 60.6
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 6.6e-12 73.9 66 57.6
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 1.1e-11 73.2 70 58.6
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 1.1e-11 73.2 66 57.6
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.1e-11 73.2 66 63.6
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 1.1e-11 73.2 74 54.1
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 1.5e-11 72.8 65 61.5
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 1.9e-11 72.4 82 50.0
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 2.5e-11 72.0 86 50.0
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 3.3e-11 71.6 72 55.6
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 5.6e-11 70.9 86 48.8
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 7.3e-11 70.5 66 57.6
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 7.3e-11 70.5 66 54.5
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 9.6e-11 70.1 74 56.8
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 9.6e-11 70.1 64 54.7
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 1.3e-10 69.7 65 61.5
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 1.6e-10 69.3 68 61.8
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 1.6e-10 69.3 65 60.0
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 1.6e-10 69.3 72 55.6
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 2.8e-10 68.6 84 47.6
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 3.6e-10 68.2 78 51.3
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 4.8e-10 67.8 72 52.8
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 6.2e-10 67.4 85 48.2
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 1.1e-09 66.6 74 54.1
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 1.8e-09 65.9 83 48.2
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 2.4e-09 65.5 86 50.0
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 3.1e-09 65.1 66 59.1
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 4.0e-09 64.7 68 54.4
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 5.3e-09 64.3 80 47.5
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 5.3e-09 64.3 65 53.8
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 5.3e-09 64.3 86 43.0
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 6.9e-09 63.9 107 43.9
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 6.9e-09 63.9 107 43.9
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 9.0e-09 63.5 70 51.4
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 1.5e-08 62.8 79 46.8
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 2.6e-08 62.0 74 45.9
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 2.6e-08 62.0 88 44.3
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 3.4e-08 61.6 83 47.0
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 3.4e-08 61.6 92 45.7
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 3.4e-08 61.6 60 60.0
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 4.4e-08 61.2 65 52.3
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 5.8e-08 60.8 81 45.7
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 5.8e-08 60.8 66 53.0
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 7.6e-08 60.5 69 52.2
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 7.6e-08 60.5 70 48.6
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 9.9e-08 60.1 70 48.6
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 2.2e-07 58.9 70 47.1
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 2.9e-07 58.5 60 55.0
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 3.8e-07 58.2 70 48.6
Glyma.14G183300 Glycine max HOM05D007802 ORTHO05D009879 3.8e-07 58.2 45 66.7
Os06g0651200 Oryza sativa ssp. japonica HOM05D007802 ORTHO05D009879 3.8e-07 58.2 71 49.3
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 3.8e-07 58.2 70 51.4
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 4.9e-07 57.8 63 49.2
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 4.9e-07 57.8 66 45.5
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 6.4e-07 57.4 81 43.2
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 1.9e-06 55.8 93 43.0
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 2.4e-06 55.5 89 42.7
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 3.2e-06 55.1 70 47.1
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 4.2e-06 54.7 106 37.7
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 5.4e-06 54.3 69 46.4
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 5.4e-06 54.3 66 43.9


User provided reference genes

Program Settings