Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.8e-109 398.7 205 100.0
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.4e-81 305.8 196 81.1
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 3.5e-80 302.0 197 78.7
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 6.0e-80 301.2 197 78.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 7.9e-80 300.8 197 77.7
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.3e-79 299.3 197 78.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.9e-79 298.5 197 78.7
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.1e-79 298.1 197 78.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.5e-78 295.8 196 78.6
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.5e-78 295.8 196 76.5
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.6e-78 294.7 197 76.6
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 5.6e-78 294.7 196 76.5
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 9.6e-78 293.9 197 77.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.3e-77 293.5 196 77.0
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.1e-77 292.7 197 76.1
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 4.8e-77 291.6 196 76.5
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 6.2e-77 291.2 197 76.1
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.2e-77 291.2 197 75.6
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 8.1e-77 290.8 197 76.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 8.1e-77 290.8 197 76.1
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 8.1e-77 290.8 197 77.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.4e-76 290.0 197 75.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.4e-76 290.0 196 75.0
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.4e-76 290.0 196 75.0
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.8e-76 289.7 197 75.1
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.8e-76 289.7 197 77.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.4e-76 289.3 196 75.5
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.1e-76 288.9 196 75.0
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.1e-76 288.9 197 74.6
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 3.1e-76 288.9 197 74.6
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 4.0e-76 288.5 196 75.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 4.0e-76 288.5 197 73.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 5.3e-76 288.1 197 76.1
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 6.9e-76 287.7 196 75.0
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.9e-76 287.7 197 75.6
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 9.0e-76 287.3 197 73.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 9.0e-76 287.3 197 76.6
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.2e-75 287.0 197 76.1
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.5e-75 286.6 197 74.6
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.0e-75 286.2 197 75.1
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.0e-75 286.2 196 74.5
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.6e-75 285.8 197 73.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.4e-75 285.4 197 74.6
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 9.9e-75 283.9 196 74.5
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.3e-74 283.5 196 75.5
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.9e-74 281.6 196 74.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 8.4e-74 280.8 189 75.1
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.1e-73 280.4 197 73.1
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.4e-73 280.0 199 74.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.4e-73 280.0 197 73.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.9e-73 279.6 198 73.7
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.9e-73 279.6 197 71.6
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.9e-73 279.6 197 73.6
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 2.4e-73 279.3 197 72.1
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 2.4e-73 279.3 196 74.0
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 3.2e-73 278.9 205 71.2
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 4.2e-73 278.5 196 72.4
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.2e-73 278.5 197 70.6
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 7.1e-73 277.7 195 73.3
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 7.1e-73 277.7 197 74.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 7.1e-73 277.7 197 72.1
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.6e-72 276.6 196 73.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.6e-72 276.6 196 73.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.6e-72 276.6 182 77.5
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.1e-72 276.2 196 71.9
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.7e-72 275.8 196 72.4
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.5e-72 275.4 197 71.1
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 4.6e-72 275.0 198 72.2
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 4.6e-72 275.0 197 71.6
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 6.0e-72 274.6 197 71.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.0e-71 273.9 196 70.9
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.9e-71 271.9 195 71.8
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 6.7e-71 271.2 197 70.6
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 8.7e-71 270.8 189 72.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.5e-70 270.0 182 75.3
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.9e-70 269.6 196 70.4
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 4.3e-70 268.5 225 64.4
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 4.3e-70 268.5 225 64.4
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.3e-69 266.9 204 69.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 4.8e-69 265.0 223 64.6
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.4e-68 263.5 187 73.8
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.4e-68 262.7 182 72.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.1e-68 262.3 222 64.4
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 5.3e-68 261.5 196 66.3
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 5.8e-67 258.1 197 72.6
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 7.6e-67 257.7 197 67.5
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.0e-66 257.3 181 72.9
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.5e-66 254.6 182 72.0
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.4e-65 253.4 197 66.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.9e-65 253.1 197 70.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.5e-65 251.5 181 70.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.3e-65 250.8 200 65.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.5e-64 248.8 197 69.5
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 3.9e-63 245.4 196 68.9
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 4.3e-62 241.9 197 68.0
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 5.7e-62 241.5 170 75.9
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 9.6e-62 240.7 173 72.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.1e-60 235.3 173 72.8
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.2e-57 225.3 197 66.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.3e-55 220.3 154 76.6
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 9.1e-52 207.6 194 59.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.9e-49 199.9 212 55.2
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 9.4e-49 197.6 139 77.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.1e-48 194.9 141 75.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.4e-44 183.7 130 69.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 7.7e-43 177.9 132 72.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.0e-39 166.0 172 57.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.0e-39 166.0 113 76.1
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 4.1e-36 155.6 120 69.2
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.6e-35 153.7 109 73.4
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 3.5e-35 152.5 137 63.5
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-27 127.5 108 63.9
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.3e-26 124.0 192 37.5
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 5.0e-26 122.1 198 35.9
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.0e-23 114.4 201 38.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 5.7e-22 108.6 83 71.1
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.8e-21 105.5 74 64.9
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 7.7e-19 98.2 101 57.4
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-18 97.4 101 57.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.3e-18 96.7 83 62.7
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 3.1e-12 76.3 61 54.1
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.3e-07 60.1 29 82.8


User provided reference genes

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