Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.4e-264 914.8 427 100.0
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.5e-197 693.0 394 80.5
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.5e-197 692.2 393 80.2
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 3.3e-197 691.8 393 80.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 4.0e-195 684.9 394 79.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.5e-194 682.9 393 78.9
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.0e-194 682.6 393 79.1
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.6e-194 682.2 393 79.6
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.3e-193 679.9 393 79.4
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.3e-193 679.9 393 78.6
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.9e-193 678.7 393 79.1
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.8e-193 678.3 393 78.4
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 4.9e-193 677.9 393 78.6
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 4.9e-193 677.9 405 76.8
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 4.9e-193 677.9 393 78.6
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 6.4e-193 677.6 393 78.9
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.4e-193 677.6 393 79.1
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.4e-193 677.6 393 79.1
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 8.4e-193 677.2 393 78.1
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.4e-192 675.6 393 78.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.4e-192 675.6 393 78.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 5.4e-192 674.5 393 78.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 9.3e-192 673.7 393 77.9
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.1e-191 672.5 393 77.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 4.6e-191 671.4 393 78.1
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.0e-191 671.0 392 77.6
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 6.0e-191 671.0 392 77.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.0e-190 670.2 394 78.4
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-190 670.2 394 77.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.3e-190 669.1 393 78.6
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 3.0e-190 668.7 393 77.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 3.9e-190 668.3 391 79.0
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 5.1e-190 667.9 394 76.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 8.7e-190 667.2 393 77.4
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.1e-189 666.8 393 76.8
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.1e-189 666.8 393 76.8
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-189 666.8 394 76.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-189 666.8 391 78.5
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.3e-189 665.2 392 77.8
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.3e-189 665.2 392 77.8
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.3e-189 665.2 393 75.8
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.3e-189 665.2 392 77.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 4.3e-189 664.8 393 75.8
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 5.6e-189 664.5 394 77.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 5.6e-189 664.5 393 76.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 7.4e-189 664.1 393 75.8
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 9.6e-189 663.7 393 76.6
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 9.6e-189 663.7 393 78.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.1e-188 662.5 392 76.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 3.7e-188 661.8 393 75.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 6.2e-188 661.0 394 76.1
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.1e-187 660.2 394 75.6
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 5.3e-187 657.9 394 75.9
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.0e-186 656.0 393 74.8
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.6e-186 655.6 392 76.5
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.4e-186 655.2 413 73.8
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.8e-186 654.4 393 75.6
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 7.6e-186 654.1 393 77.4
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.1e-184 650.2 394 75.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.9e-184 649.4 389 76.9
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.9e-184 649.4 393 75.6
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.4e-184 649.0 393 76.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 5.5e-184 647.9 393 75.8
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 5.1e-182 641.3 393 74.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.1e-181 640.2 393 74.0
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.1e-181 640.2 393 75.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.3e-181 638.6 393 74.0
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 7.4e-181 637.5 393 73.8
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.6e-180 636.3 393 73.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.0e-179 631.7 392 73.5
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 7.6e-178 627.5 393 73.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.7e-177 626.3 393 73.0
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.2e-177 625.9 393 73.5
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.8e-177 625.2 420 69.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 4.9e-177 624.8 394 74.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.1e-176 623.6 394 74.4
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 5.5e-176 621.3 408 69.6
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.2e-175 620.2 393 72.8
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.7e-174 614.0 393 73.0
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 7.4e-173 610.9 393 72.0
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.6e-170 602.4 393 71.2
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.5e-168 595.9 350 78.0
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.5e-168 594.7 342 79.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.2e-167 593.6 393 72.3
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.3e-166 589.3 346 78.3
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.3e-166 589.3 346 78.3
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.5e-165 585.9 408 65.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.7e-165 583.9 343 78.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-164 582.4 343 78.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.7e-164 582.0 342 78.7
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.5e-162 576.6 341 76.5
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 4.5e-162 575.1 327 80.4
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.4e-160 570.1 394 65.7
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.5e-160 569.3 394 64.5
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.5e-160 568.2 394 65.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.4e-158 563.5 342 75.7
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 9.7e-157 557.4 432 60.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.3e-155 551.6 341 74.8
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-154 550.4 295 84.4
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-152 543.9 395 63.0
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.2e-151 540.4 408 61.8
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.7e-150 534.6 398 60.6
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.8e-142 510.0 301 78.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.5e-141 506.9 393 62.6
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.4e-141 505.4 277 83.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.1e-139 498.8 401 57.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.1e-139 498.8 295 78.6
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 9.1e-139 497.7 293 76.8
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.5e-138 495.7 341 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 3.8e-137 492.3 343 64.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 2.3e-129 466.5 280 75.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.1e-94 349.7 426 39.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-89 334.0 222 70.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 8.1e-79 298.5 428 36.7
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.8e-55 219.5 110 90.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-54 218.4 110 89.1
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-54 218.4 110 89.1
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.1e-51 208.4 185 54.1
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 2.1e-34 151.0 102 70.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.4e-30 138.3 91 67.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 4.0e-09 67.0 40 75.0


User provided reference genes

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