Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 0.0e+00 1598.9 816 100.0
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.9e-238 829.7 828 53.6
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.9e-234 815.8 829 53.3
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.3e-221 773.9 829 50.8
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.0e-218 764.2 830 49.2
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.3e-218 763.8 825 50.5
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.2e-217 758.8 824 49.0
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.4e-212 743.0 823 48.7
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 6.9e-212 741.5 824 49.6
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.5e-211 740.3 826 47.9
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 3.4e-211 739.2 830 48.3
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 3.8e-210 735.7 825 48.8
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 1.9e-209 733.4 826 48.9
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 3.2e-209 732.6 823 48.2
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 7.2e-209 731.5 823 48.4
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 1.2e-208 730.7 824 48.7
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.1e-208 729.9 824 49.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.6e-208 728.8 828 48.7
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 3.9e-207 725.7 825 48.8
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 3.9e-207 725.7 819 48.5
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 5.1e-207 725.3 825 48.7
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 8.8e-207 724.5 825 49.0
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.0e-206 723.4 832 47.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 4.4e-206 722.2 826 47.0
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 5.7e-206 721.8 830 48.2
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 5.7e-206 721.8 829 47.2
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 9.7e-206 721.1 821 48.2
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.7e-205 720.3 829 47.9
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 2.2e-205 719.9 824 47.8
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 6.3e-205 718.4 818 47.8
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 8.2e-205 718.0 819 48.0
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.4e-204 717.2 818 47.6
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 3.1e-204 716.1 820 47.8
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 5.3e-204 715.3 818 47.7
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 9.1e-204 714.5 825 48.4
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.2e-203 714.1 829 46.7
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.7e-202 710.3 835 47.4
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 2.2e-202 709.9 833 47.4
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 5.0e-202 708.8 833 47.3
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.9e-201 706.8 831 47.8
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 1.9e-201 706.8 829 47.8
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.5e-201 706.4 835 47.5
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 3.2e-201 706.1 829 46.7
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 5.5e-201 705.3 831 47.7
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 9.4e-201 704.5 833 47.3
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.1e-200 703.4 826 45.2
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 2.7e-200 703.0 769 49.2
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 3.6e-200 702.6 824 46.0
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.7e-200 702.2 849 46.1
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.9e-200 701.4 849 46.1
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.8e-199 700.3 827 47.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.8e-199 700.3 832 46.4
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 3.9e-199 699.1 833 46.8
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 1.1e-198 697.6 833 46.1
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.5e-198 697.2 834 48.1
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.0e-198 696.8 823 45.6
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 9.7e-198 694.5 819 48.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.7e-197 693.7 819 46.6
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 3.7e-197 692.6 823 45.7
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 4.8e-197 692.2 821 46.8
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.1e-196 691.0 825 45.1
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 7.0e-196 688.3 849 45.8
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 9.1e-196 688.0 821 46.9
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.6e-195 687.2 829 46.8
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 2.6e-195 686.4 819 46.3
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 2.9e-194 682.9 828 45.4
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 2.1e-192 676.8 777 47.5
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 3.6e-192 676.0 827 45.8
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.4e-191 674.1 827 45.8
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.3e-191 673.3 820 45.4
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.5e-190 670.6 810 47.2
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 2.0e-190 670.2 826 45.8
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 4.4e-190 669.1 778 46.5
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.3e-189 667.5 791 46.4
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.2e-189 664.8 840 44.6
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 1.1e-188 664.5 866 43.4
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.4e-188 664.1 792 46.8
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 4.5e-187 659.1 770 47.0
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 1.5e-185 654.1 831 44.9
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 1.6e-184 650.6 966 41.5
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 4.7e-184 649.0 825 45.8
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.4e-180 637.5 797 45.5
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.8e-180 637.1 828 43.5
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 5.0e-178 629.0 834 42.3
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 4.7e-176 622.5 823 43.1
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.4e-174 615.9 783 44.4
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.7e-173 612.8 834 41.4
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.8e-172 610.5 833 43.0
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 2.5e-169 600.1 718 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.2e-165 587.0 777 42.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.4e-159 567.8 641 47.1
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 2.7e-155 553.5 621 48.0
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 9.9e-142 508.4 829 36.9
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 5.1e-138 496.1 864 36.7
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-135 488.4 329 80.5
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.6e-131 474.6 521 47.6
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.2e-116 423.7 807 35.8
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.2e-116 423.7 807 35.8
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 7.4e-113 412.5 827 34.3
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 6.0e-107 392.9 461 47.3
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 8.5e-101 372.5 795 31.6
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.1e-100 372.1 435 46.9
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.3e-97 360.5 441 46.0
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 9.1e-95 352.4 251 76.1
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 3.4e-94 350.5 435 43.4
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.8e-93 347.1 489 42.7
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 5.0e-93 346.7 455 44.0
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 4.4e-89 333.6 365 46.8
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.7e-83 314.3 477 39.8
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 6.1e-83 313.2 383 45.2
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 1.8e-74 285.0 320 47.2
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 2.2e-72 278.1 333 45.9
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 4.7e-67 260.4 400 40.5
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 5.5e-60 236.9 289 45.3
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.4e-58 232.3 357 38.9
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.9e-52 211.8 261 43.3
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 2.8e-51 208.0 275 47.3
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 6.1e-51 206.8 409 34.7
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 1.0e-50 206.1 263 46.8
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 5.0e-45 187.2 253 44.7
Haze_04431 Corylus avellana HOM05D000329 ORTHO05D005330 6.2e-43 180.3 196 50.5
Hma1.2p1_3491F.1_g336380 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 2.1e-38 165.2 228 42.5
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 6.6e-37 160.2 249 39.4
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-35 156.0 149 50.3
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 9.9e-33 146.4 252 38.1
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 1.2e-30 139.4 659 24.7
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.6e-30 139.0 208 38.5
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 4.6e-30 137.5 175 43.4
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 1.7e-24 119.0 203 37.9
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 2.9e-24 118.2 114 50.9
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 5.1e-21 107.5 178 38.8
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 1.5e-20 105.9 662 23.7
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 1.1e-15 89.7 87 51.7
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 2.4e-15 88.6 465 23.2
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 3.0e-13 81.6 82 45.1
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 8.7e-13 80.1 79 48.1
BcaB04g19325 Brassica carinata HOM05D000329 ORTHO05D005330 1.6e-11 75.9 79 49.4
SHI23201 Sapria himalayana HOM05D000329 ORTHO05D005330 2.1e-11 75.5 73 47.9
SHI23206 Sapria himalayana HOM05D000329 ORTHO05D005330 7.6e-09 67.0 79 48.1
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.6e-06 59.3 53 56.6
HPP92_025570 Vanilla planifolia HOM05D000963 ORTHO05D011117 2.1e-06 58.9 74 48.6
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 3.5e-06 58.2 72 41.7


User provided reference genes

Program Settings