Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 4.6e-183 644.4 328 100.0
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 8.6e-137 490.7 329 80.5
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.2e-117 427.2 250 87.6
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 9.6e-96 354.4 331 56.2
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 6.4e-92 341.7 331 54.4
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 9.3e-91 337.8 332 54.2
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 7.9e-90 334.7 325 53.8
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.3e-89 334.0 326 53.7
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.9e-88 330.1 326 53.1
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 3.3e-88 329.3 326 53.1
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 5.6e-88 328.6 326 52.8
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 9.6e-88 327.8 326 53.4
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.3e-87 327.4 325 53.5
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.6e-87 327.0 326 52.1
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.6e-87 327.0 326 52.5
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.8e-87 326.2 326 52.5
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 4.0e-86 322.4 326 52.8
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 5.3e-86 322.0 325 51.1
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 9.0e-86 321.2 326 50.9
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 9.0e-86 321.2 325 51.7
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 9.0e-86 321.2 326 51.8
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 9.0e-86 321.2 325 51.4
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.5e-85 320.5 326 53.1
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 2.0e-85 320.1 326 52.5
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 2.0e-85 320.1 326 51.8
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 2.6e-85 319.7 325 52.6
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 7.6e-85 318.2 326 52.1
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 7.6e-85 318.2 325 51.1
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.2e-84 316.6 326 50.6
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 2.2e-84 316.6 326 51.5
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 2.2e-84 316.6 326 50.6
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.9e-84 316.2 326 50.9
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 2.9e-84 316.2 330 52.1
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 3.8e-84 315.8 325 51.4
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 3.8e-84 315.8 325 51.4
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.8e-84 315.8 325 51.4
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 3.8e-84 315.8 326 50.6
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.8e-84 315.8 326 50.6
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.8e-84 315.8 326 50.6
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 4.9e-84 315.5 326 50.6
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 4.9e-84 315.5 326 50.3
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 6.4e-84 315.1 326 50.6
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 8.4e-84 314.7 325 51.4
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.9e-83 313.5 325 51.4
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 1.9e-83 313.5 326 50.6
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.4e-83 313.2 326 52.1
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 4.2e-83 312.4 325 51.1
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 7.1e-83 311.6 326 49.7
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 7.1e-83 311.6 326 50.9
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 7.1e-83 311.6 326 51.2
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 9.3e-83 311.2 331 52.6
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 9.3e-83 311.2 331 50.5
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 9.3e-83 311.2 325 49.2
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.2e-82 310.8 325 51.4
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.6e-82 310.5 326 49.7
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.7e-82 309.7 326 50.9
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 3.5e-82 309.3 325 50.2
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 3.5e-82 309.3 315 52.7
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 3.5e-82 309.3 325 50.8
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 3.5e-82 309.3 326 50.3
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 4.6e-82 308.9 327 50.2
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 4.6e-82 308.9 326 50.3
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 7.9e-82 308.1 326 50.0
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 7.9e-82 308.1 325 51.1
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.0e-81 307.8 325 49.8
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.0e-81 307.8 328 50.0
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.8e-81 307.0 328 50.0
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.3e-81 306.6 325 49.2
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 3.0e-81 306.2 325 49.5
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 8.7e-81 304.7 325 50.5
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.9e-80 303.5 325 49.2
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.5e-80 303.1 325 47.7
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 5.6e-80 302.0 325 49.8
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 7.4e-80 301.6 331 50.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 1.3e-79 300.8 325 50.2
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.6e-79 300.4 326 48.2
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 2.8e-79 299.7 325 47.7
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.1e-78 297.7 326 46.9
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.8e-78 297.0 329 47.1
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 3.1e-78 296.2 298 51.7
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.5e-77 293.9 326 46.9
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 2.6e-77 293.1 326 46.9
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 4.5e-77 292.4 300 53.3
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 2.5e-75 286.6 275 55.6
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 3.2e-75 286.2 263 55.1
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.1e-74 283.5 327 44.0
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.7e-74 283.1 327 47.7
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 4.6e-74 282.3 327 47.7
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.0e-74 282.0 301 50.5
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.3e-73 280.8 288 51.4
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 3.9e-73 279.3 269 52.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 3.3e-72 276.2 271 52.4
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.4e-70 270.8 264 52.7
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.4e-70 270.0 324 45.7
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 3.1e-70 269.6 264 53.8
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 6.9e-70 268.5 264 51.5
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.7e-68 263.8 364 41.8
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 5.0e-68 262.3 268 51.5
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.9e-67 260.4 323 46.7
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 4.2e-67 259.2 270 50.7
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.6e-66 257.3 268 47.8
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.6e-66 256.1 252 52.8
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 5.1e-65 252.3 339 42.8
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 9.7e-64 248.1 324 41.7
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 6.9e-62 241.9 370 39.7
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.7e-60 237.3 227 54.6
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 6.5e-60 235.3 248 49.2
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.2e-59 233.0 300 41.3
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.2e-59 233.0 300 41.3
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 2.7e-58 229.9 331 41.7
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 2.3e-57 226.9 249 47.8
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.4e-46 191.0 243 44.4
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 7.7e-45 185.3 261 42.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 3.2e-43 179.9 177 53.7
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 3.6e-42 176.4 178 48.9
BcaB04g19325 Brassica carinata HOM05D000329 ORTHO05D005330 2.0e-21 107.5 174 37.9
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 7.3e-19 99.0 89 53.9
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 1.6e-18 97.8 357 25.8
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.1e-18 97.4 147 36.1
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 3.5e-13 80.1 247 25.5
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 7.5e-08 62.4 253 24.1


User provided reference genes

Program Settings