Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 3.3e-295 1017.7 532 100.0
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 9.4e-85 318.5 645 35.3
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 6.8e-83 312.4 645 35.0
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 6.6e-78 295.8 553 36.7
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 5.2e-75 286.2 643 33.3
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 5.4e-72 276.2 635 33.1
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 7.0e-72 275.8 647 32.5
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.0e-72 275.8 645 32.1
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 2.7e-71 273.9 651 32.6
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 5.9e-71 272.7 653 31.4
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 3.0e-70 270.4 646 32.0
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 3.9e-70 270.0 656 31.2
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 5.0e-70 269.6 560 34.6
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 5.0e-70 269.6 646 31.6
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 2.3e-67 260.8 645 30.5
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 4.0e-67 260.0 642 30.5
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 5.2e-67 259.6 645 30.4
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.0e-66 257.7 646 30.8
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 2.0e-66 257.7 669 30.9
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 2.0e-66 257.7 648 31.2
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 2.6e-66 257.3 645 31.0
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 5.8e-66 256.1 559 32.7
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 5.8e-66 256.1 647 30.8
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 7.5e-66 255.8 647 31.4
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 1.7e-65 254.6 648 31.0
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 2.2e-65 254.2 646 31.1
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 2.9e-65 253.8 656 31.4
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 6.4e-65 252.7 645 29.5
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 1.4e-64 251.5 644 30.3
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 1.9e-64 251.1 636 30.3
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 9.2e-64 248.8 636 29.4
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.7e-63 247.3 561 32.4
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 4.6e-63 246.5 648 30.2
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 6.0e-63 246.1 646 30.3
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 7.8e-63 245.7 556 32.4
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 1.7e-62 244.6 561 33.0
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 1.7e-62 244.6 542 32.7
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 3.9e-62 243.4 646 29.9
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 3.3e-61 240.4 659 29.7
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 5.6e-61 239.6 647 30.1
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 5.6e-61 239.6 582 30.8
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 9.5e-61 238.8 623 28.9
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.6e-60 238.0 645 29.6
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 1.6e-60 238.0 645 29.0
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 4.0e-59 233.4 347 42.1
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.2e-58 231.9 631 30.1
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 1.2e-58 231.9 571 31.3
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 1.5e-58 231.5 617 30.3
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 3.4e-58 230.3 549 32.6
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 4.4e-58 229.9 644 29.5
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 5.8e-58 229.6 558 31.9
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 4.9e-57 226.5 646 29.6
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 1.1e-56 225.3 629 29.9
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.1e-56 225.3 544 32.4
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 2.4e-56 224.2 687 28.5
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 3.2e-56 223.8 583 29.5
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 3.2e-56 223.8 641 29.8
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 4.1e-56 223.4 596 31.0
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 1.2e-55 221.9 571 30.1
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 2.1e-55 221.1 644 28.9
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 4.6e-55 219.9 552 30.1
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.3e-54 218.4 641 27.9
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 1.7e-54 218.0 347 40.9
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 1.7e-54 218.0 641 29.2
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 2.3e-54 217.6 348 40.2
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 3.0e-54 217.2 640 28.0
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 3.9e-54 216.9 656 28.4
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 6.6e-54 216.1 580 29.0
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 6.6e-54 216.1 640 27.8
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 8.6e-54 215.7 550 29.6
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.5e-53 214.9 631 28.1
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 5.6e-53 213.0 552 30.1
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 7.3e-53 212.6 570 29.1
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 9.5e-53 212.2 621 28.2
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 9.5e-53 212.2 348 37.1
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 1.1e-51 208.8 573 28.4
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 1.1e-51 208.8 519 30.1
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 4.0e-51 206.8 571 29.4
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 6.8e-51 206.1 510 31.6
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 1.2e-50 205.3 567 28.4
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 1.2e-50 205.3 335 39.7
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 2.0e-50 204.5 554 28.5
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 2.0e-50 204.5 342 40.1
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 4.4e-50 203.4 631 27.9
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 7.1e-48 196.1 522 28.4
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 7.1e-48 196.1 505 31.1
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 4.6e-47 193.4 545 27.3
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 4.6e-47 193.4 343 38.2
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 3.9e-46 190.3 535 28.6
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 6.6e-46 189.5 347 35.7
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 1.5e-45 188.3 351 35.3
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 2.4e-43 181.0 346 32.7
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 4.0e-43 180.3 331 36.3
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 5.2e-43 179.9 348 36.8
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 5.2e-43 179.9 334 36.8
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 3.4e-42 177.2 638 26.2
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 2.2e-41 174.5 334 35.9
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 3.2e-40 170.6 269 39.0
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 1.6e-39 168.3 341 34.6
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 1.1e-32 145.6 342 32.5
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 6.0e-31 139.8 336 30.1
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 1.3e-22 112.1 205 34.6
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.1e-21 109.0 149 40.9
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 1.3e-17 95.5 130 41.5
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 4.3e-13 80.5 272 26.5
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 3.7e-12 77.4 307 25.7
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 2.4e-11 74.7 103 35.9
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 9.0e-11 72.8 378 22.0
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 5.5e-08 63.5 322 24.5
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 1.2e-07 62.4 333 20.7


User provided reference genes

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