Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025551 Vanilla planifolia HOM05D001378 ORTHO05D429771 1.5e-89 332.8 169 100.0
Nitab4.5_0000353g0060 Nicotiana tabacum HOM05D001378 ORTHO05D001249 4.7e-14 82.0 159 37.1
HPP92_025513 Vanilla planifolia HOM05D001378 ORTHO05D001249 1.9e-10 70.1 240 30.4
HPP92_025523 Vanilla planifolia HOM05D001378 ORTHO05D001249 9.2e-10 67.8 239 30.1
Sabra01G0107400 Salix brachista HOM05D001378 ORTHO05D001249 7.8e-09 64.7 240 27.9
Eucgr.D02218 Eucalyptus grandis HOM05D001378 ORTHO05D001249 1.0e-08 64.3 248 27.0
PSO063G6358 Papaver somniferum HOM05D001378 ORTHO05D001249 2.3e-08 63.2 236 28.0
TWI81G0969 Tripterygium wilfordii HOM05D001378 ORTHO05D001249 2.3e-08 63.2 239 28.0
Aqoxy3G02215 Aquilegia oxysepala HOM05D001378 ORTHO05D001249 3.0e-08 62.8 238 28.6
Nitab4.5_0004669g0040 Nicotiana tabacum HOM05D001378 ORTHO05D001249 3.0e-08 62.8 213 28.6
CiPaw.12G067000 Carya illinoinensis HOM05D001378 ORTHO05D001249 3.9e-08 62.4 256 27.0
Duzib084G1382 Durio zibethinus HOM05D001378 ORTHO05D001249 3.9e-08 62.4 239 27.2
Potri.001G138500 Populus trichocarpa HOM05D001378 ORTHO05D001249 3.9e-08 62.4 240 26.7
MBI02_g28337_MAGBIO Magnolia biondii HOM05D001378 ORTHO05D001249 5.1e-08 62.0 240 27.1
PSO782G4827 Papaver somniferum HOM05D001378 ORTHO05D001249 5.1e-08 62.0 236 28.0
Gohir.D12G209300 Gossypium hirsutum HOM05D001378 ORTHO05D001249 8.6e-08 61.2 237 27.4
Phvul.003G283400 Phaseolus vulgaris HOM05D001378 ORTHO05D001249 8.6e-08 61.2 239 27.6
Potri.003G095300 Populus trichocarpa HOM05D001378 ORTHO05D001249 8.6e-08 61.2 240 27.1
HPP92_007127 Vanilla planifolia HOM05D001378 ORTHO05D001249 8.6e-08 61.2 236 29.7
TAR374G0504 Trochodendron aralioides HOM05D001378 ORTHO05D001249 1.1e-07 60.8 237 27.0
EL10Ac3g05063 Beta vulgaris HOM05D001378 ORTHO05D001249 1.5e-07 60.5 176 29.5
DCAR_008241 Daucus carota HOM05D001378 ORTHO05D001249 1.5e-07 60.5 238 27.3
QL12p001140 Quercus lobata HOM05D001378 ORTHO05D001249 1.5e-07 60.5 240 26.7
DCAR_004284 Daucus carota HOM05D001378 ORTHO05D001249 2.5e-07 59.7 247 26.7
Nn8g40385 Nelumbo nucifera HOM05D001378 ORTHO05D001249 3.3e-07 59.3 256 26.6
TWI60G0286 Tripterygium wilfordii HOM05D001378 ORTHO05D001249 3.3e-07 59.3 239 26.4
TAR375G1160 Trochodendron aralioides HOM05D001378 ORTHO05D001249 3.3e-07 59.3 237 27.4
CDE05G0699 Ceratophyllum demersum HOM05D001378 ORTHO05D001249 4.3e-07 58.9 238 28.2
Manes.17G009700 Manihot esculenta HOM05D001378 ORTHO05D001249 4.3e-07 58.9 240 26.2
Glyma.16G091900 Glycine max HOM05D001378 ORTHO05D001249 5.6e-07 58.5 45 68.9
SEGI_33234 Sequoiadendron giganteum HOM05D001378 ORTHO05D001249 5.6e-07 58.5 62 54.8
CAN.G137.3 Capsicum annuum HOM05D001378 ORTHO05D001249 7.3e-07 58.2 256 26.6
Lsat_1_v5_gn_6_3421 Lactuca sativa HOM05D001378 ORTHO05D001249 9.5e-07 57.8 102 36.3
VMungo0251G3286 Vigna mungo HOM05D001378 ORTHO05D001249 9.5e-07 57.8 45 68.9
Cc00_g08650 Coffea canephora HOM05D001378 ORTHO05D001249 1.2e-06 57.4 244 26.2
Glyma.09G206800 Glycine max HOM05D001378 ORTHO05D001249 1.2e-06 57.4 239 26.8
Nitab4.5_0002778g0030 Nicotiana tabacum HOM05D001378 ORTHO05D001249 1.2e-06 57.4 208 28.8
Atru.chr6.1631 Acer truncatum HOM05D001378 ORTHO05D001249 1.6e-06 57.0 98 39.8
Ciclev10016988m.g Citrus clementina HOM05D001378 ORTHO05D001249 1.6e-06 57.0 45 66.7
Cc08_g03240 Coffea canephora HOM05D001378 ORTHO05D001249 1.6e-06 57.0 239 25.9
MD16G1270600 Malus domestica HOM05D001378 ORTHO05D001249 1.6e-06 57.0 240 26.2
MSTRG.1996 Avicennia marina HOM05D001378 ORTHO05D001249 2.1e-06 56.6 239 26.8
CDE05G0423 Ceratophyllum demersum HOM05D001378 ORTHO05D001249 2.1e-06 56.6 238 27.7
CsaV3_3G001490 Cucumis sativus L. HOM05D001378 ORTHO05D001249 2.1e-06 56.6 52 55.8
Dinv25244 Davidia involucrata HOM05D001378 ORTHO05D001249 2.1e-06 56.6 237 27.0
Glyma.01G015600 Glycine max HOM05D001378 ORTHO05D001249 2.1e-06 56.6 239 26.4
Gorai.008G224800 Gossypium raimondii HOM05D001378 ORTHO05D001249 2.1e-06 56.6 234 26.5
Nn7g37123 Nelumbo nucifera HOM05D001378 ORTHO05D001249 2.1e-06 56.6 102 37.3
Solyc06g062360.3 Solanum lycopersicum HOM05D001378 ORTHO05D001249 2.1e-06 56.6 237 26.6
Sopen06g021580 Solanum pennellii HOM05D001378 ORTHO05D001249 2.1e-06 56.6 237 26.6
PGSC0003DMG401016772 Solanum tuberosum HOM05D001378 ORTHO05D001249 2.1e-06 56.6 237 26.6
TPR.G8084 Trifolium pratense HOM05D001378 ORTHO05D001249 2.1e-06 56.6 239 27.2
CSS0028757 Camellia sinensis var. sinensis HOM05D001378 ORTHO05D001249 2.8e-06 56.2 240 25.8
Cfa012489 Carpinus fangiana HOM05D001378 ORTHO05D001249 2.8e-06 56.2 237 26.2
AUR62018664 Chenopodium quinoa HOM05D001378 ORTHO05D001249 2.8e-06 56.2 46 60.9
HanXRQChr13g0419921 Helianthus annuus HOM05D001378 ORTHO05D001249 2.8e-06 56.2 102 35.3
Os02g0702800 Oryza sativa ssp. japonica HOM05D001378 ORTHO05D001249 2.8e-06 56.2 102 34.3
Solyc11g066910.3 Solanum lycopersicum HOM05D001378 ORTHO05D001249 2.8e-06 56.2 237 26.2
Sopen11g026630 Solanum pennellii HOM05D001378 ORTHO05D001249 2.8e-06 56.2 237 26.2
unitig_52.g17202 Utricularia gibba HOM05D001378 ORTHO05D001249 2.8e-06 56.2 249 26.1
arahy.Tifrunner.gnm1.ann1.7X6P0W Arachis hypogaea HOM05D001378 ORTHO05D001249 3.6e-06 55.8 45 66.7
MSTRG.13747 Avicennia marina HOM05D001378 ORTHO05D001249 3.6e-06 55.8 44 68.2
COL.COLO4_16966 Corchorus olitorius HOM05D001378 ORTHO05D001249 3.6e-06 55.8 239 26.4
ECA240G2955 Erigeron canadensis HOM05D001378 ORTHO05D001249 3.6e-06 55.8 102 36.3
Gohir.A09G199800 Gossypium hirsutum HOM05D001378 ORTHO05D001249 3.6e-06 55.8 237 26.6
Gorai.006G217600 Gossypium raimondii HOM05D001378 ORTHO05D001249 3.6e-06 55.8 45 64.4
Hma1.2p1_0572F.1_g181180 Hydrangea macrophylla HOM05D001378 ORTHO05D001249 3.6e-06 55.8 43 69.8
MBI18_g06640_MAGBIO Magnolia biondii HOM05D001378 ORTHO05D001249 3.6e-06 55.8 62 53.2
Sc22g0001770 Simmondsia chinensis HOM05D001378 ORTHO05D001249 3.6e-06 55.8 240 25.4
VMungo1215G0833 Vigna mungo HOM05D001378 ORTHO05D001249 3.6e-06 55.8 107 40.2
ATR0752G203 Amborella trichopoda HOM05D001378 ORTHO05D001249 4.7e-06 55.5 239 25.1
arahy.Tifrunner.gnm1.ann1.50YMIU Arachis hypogaea HOM05D001378 ORTHO05D001249 4.7e-06 55.5 43 69.8
arahy.Tifrunner.gnm1.ann1.BB0AZK Arachis hypogaea HOM05D001378 ORTHO05D001249 4.7e-06 55.5 43 69.8
arahy.Tifrunner.gnm1.ann1.HRV8GT Arachis hypogaea HOM05D001378 ORTHO05D001249 4.7e-06 55.5 43 69.8
arahy.Tifrunner.gnm1.ann1.VK0N59 Arachis hypogaea HOM05D001378 ORTHO05D001249 4.7e-06 55.5 43 69.8
CAN.G726.31 Capsicum annuum HOM05D001378 ORTHO05D001249 4.7e-06 55.5 237 25.7
Haze_08176 Corylus avellana HOM05D001378 ORTHO05D001249 4.7e-06 55.5 237 25.7
ECA233G3270 Erigeron canadensis HOM05D001378 ORTHO05D001249 4.7e-06 55.5 233 25.3
FAN04G2088 Fragaria x ananassa HOM05D001378 ORTHO05D001249 4.7e-06 55.5 216 26.4
MBI13_g44210_MAGBIO Magnolia biondii HOM05D001378 ORTHO05D001249 4.7e-06 55.5 62 53.2
Psat4g122440 Pisum sativum HOM05D001378 ORTHO05D001249 4.7e-06 55.5 43 69.8
THA.LOC104798485 Tarenaya hassleriana HOM05D001378 ORTHO05D001249 4.7e-06 55.5 45 64.4
Thecc.03G307600 Theobroma cacao HOM05D001378 ORTHO05D001249 4.7e-06 55.5 239 26.4
GSVIVG01013100001 Vitis vinifera HOM05D001378 ORTHO05D001249 4.7e-06 55.5 237 26.2
Aa31LG2G13730 Aethionema arabicum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 43 65.1
CSS0013686 Camellia sinensis var. sinensis HOM05D001378 ORTHO05D001249 6.2e-06 55.1 43 67.4
CiPaw.11G097000 Carya illinoinensis HOM05D001378 ORTHO05D001249 6.2e-06 55.1 237 26.2
CDE01G0104 Ceratophyllum demersum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 46 60.9
Gohir.A08G154700 Gossypium hirsutum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 45 64.4
Gohir.A12G206800 Gossypium hirsutum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 43 67.4
Gohir.D08G175200 Gossypium hirsutum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 45 64.4
Gorai.004G183100 Gossypium raimondii HOM05D001378 ORTHO05D001249 6.2e-06 55.1 45 64.4
Solyc08g076540.3 Solanum lycopersicum HOM05D001378 ORTHO05D001249 6.2e-06 55.1 237 25.7
Sopen08g025120 Solanum pennellii HOM05D001378 ORTHO05D001249 6.2e-06 55.1 237 25.7
Actinidia03354 Actinidia chinensis HOM05D001378 ORTHO05D001249 8.1e-06 54.7 45 64.4
AL1G46430 Arabidopsis lyrata HOM05D001378 ORTHO05D001249 8.1e-06 54.7 234 26.1
ClCG10G001400 Citrullus lanatus HOM05D001378 ORTHO05D001249 8.1e-06 54.7 46 60.9
MELO3C013834.2 Cucumis melo HOM05D001378 ORTHO05D001249 8.1e-06 54.7 46 60.9
Dinv28987 Davidia involucrata HOM05D001378 ORTHO05D001249 8.1e-06 54.7 237 26.2
Lalb_Chr09g0325571 Lupinus albus HOM05D001378 ORTHO05D001249 8.1e-06 54.7 75 45.3
Prupe.5G030000 Prunus persica HOM05D001378 ORTHO05D001249 8.1e-06 54.7 240 25.4
TAR629G1024 Trochodendron aralioides HOM05D001378 ORTHO05D001249 8.1e-06 54.7 234 26.1


User provided reference genes

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