Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025488 Vanilla planifolia HOM05D005160 ORTHO05D006127 3.9e-58 228.0 125 100.0
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 6.8e-42 174.1 124 72.6
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 6.8e-42 174.1 125 70.4
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 1.5e-41 172.9 125 69.6
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 3.4e-41 171.8 126 72.2
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 3.4e-41 171.8 126 73.0
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 9.8e-41 170.2 125 72.0
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 1.3e-40 169.9 126 71.4
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.3e-40 169.9 126 71.4
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 1.3e-40 169.9 123 70.7
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 1.7e-40 169.5 125 72.0
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 1.7e-40 169.5 125 72.0
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 1.7e-40 169.5 125 72.0
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 1.7e-40 169.5 121 71.1
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 2.2e-40 169.1 126 71.4
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 3.7e-40 168.3 124 71.8
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 4.8e-40 167.9 126 70.6
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 4.8e-40 167.9 126 71.4
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 4.8e-40 167.9 125 71.2
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 6.3e-40 167.5 125 71.2
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 6.3e-40 167.5 124 69.4
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 1.1e-39 166.8 125 68.8
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 1.4e-39 166.4 125 71.2
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 1.8e-39 166.0 125 72.0
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 3.1e-39 165.2 124 69.4
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 3.1e-39 165.2 126 69.8
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 4.1e-39 164.9 124 70.2
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 5.4e-39 164.5 124 70.2
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 9.1e-39 163.7 119 70.6
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 1.6e-38 162.9 123 69.9
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 2.0e-38 162.5 125 68.8
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 2.0e-38 162.5 125 69.6
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 4.5e-38 161.4 126 69.0
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 7.7e-38 160.6 125 68.8
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 7.7e-38 160.6 125 67.2
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 1.0e-37 160.2 125 68.8
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 1.3e-37 159.8 125 68.8
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 1.7e-37 159.5 126 70.6
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 1.7e-37 159.5 125 68.8
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 2.3e-37 159.1 125 68.8
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 2.9e-37 158.7 125 67.2
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 3.8e-37 158.3 117 70.9
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 6.5e-37 157.5 125 68.8
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 1.9e-36 156.0 117 69.2
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.9e-36 156.0 115 69.6
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 2.5e-36 155.6 125 64.8
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 5.5e-36 154.5 125 66.4
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 7.2e-36 154.1 121 66.1
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 7.2e-36 154.1 125 65.6
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 7.2e-36 154.1 114 67.5
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 9.5e-36 153.7 124 67.7
Lj9A392T37 Lonicera japonica HOM05D005160 ORTHO05D006127 1.2e-35 153.3 116 66.4
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 1.2e-35 153.3 116 68.1
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 1.6e-35 152.9 125 68.8
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 2.1e-35 152.5 117 67.5
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 2.1e-35 152.5 117 68.4
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 2.1e-35 152.5 125 62.4
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 2.1e-35 152.5 117 67.5
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 2.1e-35 152.5 126 63.5
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 2.8e-35 152.1 117 66.7
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 2.8e-35 152.1 125 64.8
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 2.8e-35 152.1 115 68.7
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 3.6e-35 151.8 117 67.5
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 3.6e-35 151.8 126 62.7
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 4.7e-35 151.4 117 67.5
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 4.7e-35 151.4 117 67.5
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 4.7e-35 151.4 117 67.5
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 4.7e-35 151.4 116 67.2
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 4.7e-35 151.4 116 66.4
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 4.7e-35 151.4 117 64.1
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 6.1e-35 151.0 125 64.0
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 6.1e-35 151.0 116 68.1
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 6.1e-35 151.0 117 67.5
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 8.0e-35 150.6 117 67.5
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 1.4e-34 149.8 124 66.1
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 1.4e-34 149.8 116 66.4
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 1.8e-34 149.4 126 64.3
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 1.8e-34 149.4 121 62.8
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 3.0e-34 148.7 125 62.4
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 4.0e-34 148.3 117 63.2
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 5.2e-34 147.9 117 63.2
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 5.2e-34 147.9 124 62.1
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 6.8e-34 147.5 116 64.7
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 8.9e-34 147.1 117 66.7
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 1.2e-33 146.7 114 68.4
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 1.2e-33 146.7 125 61.6
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 1.5e-33 146.4 116 64.7
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 2.0e-33 146.0 113 66.4
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 2.0e-33 146.0 115 66.1
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 1.7e-32 142.9 111 64.0
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 3.7e-32 141.7 115 61.7
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 6.3e-32 141.0 115 63.5
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 1.4e-31 139.8 125 61.6
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 5.4e-31 137.9 102 69.6
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 2.0e-30 136.0 115 60.9
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 2.7e-30 135.6 96 71.9
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 2.7e-30 135.6 96 70.8
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 7.8e-30 134.0 102 67.6
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 7.8e-30 134.0 102 66.7
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 2.9e-29 132.1 151 52.3
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 5.0e-29 131.3 122 57.4
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 1.1e-28 130.2 94 69.1
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 1.9e-28 129.4 115 58.3
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 2.0e-25 119.4 95 65.3
Migut.N03290 Erythranthe guttata HOM05D005160 ORTHO05D006127 3.7e-24 115.2 105 57.1
TPR.G40783 Trifolium pratense HOM05D005160 ORTHO05D006127 6.4e-24 114.4 87 66.7
Cpa.g.sc37.160 Carica papaya HOM05D005160 ORTHO05D006127 3.2e-23 112.1 76 71.1
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 1.2e-22 110.2 115 47.8
Migut.B00916 Erythranthe guttata HOM05D005160 ORTHO05D006127 2.3e-21 105.9 86 61.6
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 5.0e-21 104.8 121 49.6
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 3.3e-20 102.1 95 57.9
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 5.2e-18 94.7 117 44.4
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 1.2e-17 93.6 85 58.8
Actinidia00615 Actinidia chinensis HOM05D005160 ORTHO05D006127 4.4e-17 91.7 70 67.1
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis HOM05D005160 ORTHO05D006127 2.8e-11 72.4 147 36.1
Pp3c24_1990 Physcomitrium patens HOM05D005160 ORTHO05D006127 4.4e-09 65.1 105 40.0
CBR_g32587 Chara braunii HOM05D005160 ORTHO05D006127 7.8e-06 54.3 121 34.7


User provided reference genes

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