Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025449 Vanilla planifolia HOM05D006292 ORTHO05D006110 9.1e-68 260.0 122 100.0
Aqoxy3G02346 Aquilegia oxysepala HOM05D006292 ORTHO05D006110 5.4e-12 74.7 119 39.5
Thecc.03G227700 Theobroma cacao HOM05D006292 ORTHO05D006110 9.3e-12 73.9 121 43.0
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 1.2e-11 73.6 120 39.2
TWI81G0365 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 6.0e-11 71.2 122 40.2
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 7.9e-11 70.9 122 37.7
Nn1g08042 Nelumbo nucifera HOM05D006292 ORTHO05D006110 3.9e-10 68.6 86 43.0
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 6.7e-10 67.8 117 37.6
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 8.7e-10 67.4 121 38.0
MD16G1274300 Malus domestica HOM05D006292 ORTHO05D006110 1.9e-09 66.2 124 36.3
FAN13G0922 Fragaria x ananassa HOM05D006292 ORTHO05D006110 2.5e-09 65.9 127 36.2
Gohir.A09G201400 Gossypium hirsutum HOM05D006292 ORTHO05D006110 1.3e-08 63.5 130 35.4
Prupe.5G036400 Prunus persica HOM05D006292 ORTHO05D006110 1.3e-08 63.5 127 35.4
Gohir.D09G193100 Gossypium hirsutum HOM05D006292 ORTHO05D006110 1.6e-08 63.2 91 39.6
Eucgr.D02199 Eucalyptus grandis HOM05D006292 ORTHO05D006110 2.1e-08 62.8 130 36.2
Cc08_g02780 Coffea canephora HOM05D006292 ORTHO05D006110 2.8e-08 62.4 125 36.0
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 3.7e-08 62.0 125 36.0
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 3.7e-08 62.0 116 35.3
COL.COLO4_17031 Corchorus olitorius HOM05D006292 ORTHO05D006110 1.4e-07 60.1 123 35.0
Gorai.006G216600 Gossypium raimondii HOM05D006292 ORTHO05D006110 1.4e-07 60.1 88 38.6
Manes.15G181600 Manihot esculenta HOM05D006292 ORTHO05D006110 1.4e-07 60.1 115 33.0
Eucgr.E00278 Eucalyptus grandis HOM05D006292 ORTHO05D006110 5.3e-07 58.2 133 36.1
Rhsim11G0014800 Rhododendron simsii HOM05D006292 ORTHO05D006110 6.9e-07 57.8 77 49.4
vmacro00329 Vaccinium macrocarpon HOM05D006292 ORTHO05D006110 9.0e-07 57.4 119 37.0
CSS0025259 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 1.2e-06 57.0 122 34.4
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 1.5e-06 56.6 124 34.7
Dinv25216 Davidia involucrata HOM05D000567 ORTHO05D000767 2.0e-06 56.2 94 40.4
TAR636G3028 Trochodendron aralioides HOM05D006292 ORTHO05D006110 2.0e-06 56.2 118 35.6
QL12p005176 Quercus lobata HOM05D006292 ORTHO05D006110 2.6e-06 55.8 125 36.0
Atru.chr6.1708 Acer truncatum HOM05D006292 ORTHO05D006110 3.4e-06 55.5 119 33.6
Duzib068G0707 Durio zibethinus HOM05D006292 ORTHO05D006110 4.5e-06 55.1 84 45.2
FAN04G1003 Fragaria x ananassa HOM05D006292 ORTHO05D006110 4.5e-06 55.1 80 42.5
FAN08G0524 Fragaria x ananassa HOM05D006292 ORTHO05D006110 4.5e-06 55.1 80 42.5
FAN18G1495 Fragaria x ananassa HOM05D006292 ORTHO05D006110 4.5e-06 55.1 80 42.5
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 5.8e-06 54.7 125 32.8
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 5.8e-06 54.7 125 32.8
Ca_06080_v3 Cicer arietinum L. HOM05D006292 ORTHO05D006110 1.0e-05 53.9 115 32.2


User provided reference genes

Program Settings