Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 0.0e+00 1260.7 719 100.0
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 7.5e-101 372.5 637 36.6
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.9e-96 357.8 689 45.1
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.2e-96 356.7 702 42.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.2e-93 348.6 710 44.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.6e-90 338.2 587 37.0
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 8.5e-89 332.4 603 36.2
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.5e-88 330.9 709 41.7
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 3.2e-88 330.5 720 41.9
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 4.2e-88 330.1 715 42.2
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.7e-87 327.4 702 42.6
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 3.6e-87 327.0 691 42.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 4.7e-87 326.6 709 42.3
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 6.1e-87 326.2 617 36.0
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.8e-86 324.7 700 43.1
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 6.8e-86 322.8 797 39.8
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.2e-85 322.0 698 43.0
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.5e-85 321.6 711 40.9
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.5e-85 321.6 696 42.2
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 9.8e-85 318.9 706 41.9
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.3e-84 318.5 622 35.0
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 2.2e-84 317.8 570 35.1
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 6.3e-84 316.2 592 34.6
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 8.3e-84 315.8 587 33.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.3e-84 315.8 631 35.2
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.1e-83 315.5 674 42.4
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.1e-83 313.9 615 35.0
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 9.2e-83 312.4 705 39.9
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.6e-82 311.6 678 41.0
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 3.5e-82 310.5 707 40.7
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 3.5e-82 310.5 707 40.9
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 4.5e-82 310.1 684 43.1
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.0e-81 308.9 697 41.8
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 8.6e-81 305.8 689 40.2
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.5e-80 305.1 696 40.5
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.9e-80 304.7 709 39.9
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 3.3e-80 303.9 719 41.4
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 7.3e-80 302.8 699 41.5
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.6e-79 301.6 597 33.7
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.6e-79 301.6 690 41.2
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.6e-79 301.6 587 33.4
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.1e-79 301.2 723 37.6
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 4.7e-79 300.1 588 33.7
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.8e-78 298.1 597 33.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.7e-76 291.6 705 40.0
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 4.9e-76 290.0 705 40.1
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 1.4e-75 288.5 682 41.8
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.4e-75 286.6 700 40.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.7e-74 284.3 676 39.8
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.7e-74 284.3 612 44.3
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 3.5e-74 283.9 678 40.0
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 3.9e-73 280.4 681 41.4
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 6.6e-73 279.6 633 32.1
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.5e-72 277.7 582 32.8
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 3.3e-72 277.3 656 42.4
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 4.3e-72 276.9 599 32.1
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 5.6e-72 276.6 676 39.1
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 5.6e-72 276.6 719 37.6
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 9.5e-72 275.8 575 33.4
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 3.6e-71 273.9 686 40.4
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 2.3e-70 271.2 634 42.0
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 4.0e-70 270.4 673 38.8
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 5.2e-70 270.0 596 32.7
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 6.8e-70 269.6 690 41.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 8.9e-70 269.2 688 40.6
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.2e-69 268.9 799 36.9
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.5e-69 268.5 688 41.4
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 2.6e-69 267.7 676 40.8
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.4e-69 266.9 680 31.0
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.9e-68 264.2 748 38.9
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 8.3e-68 262.7 642 43.0
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.9e-67 261.5 692 38.2
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-65 255.4 711 39.4
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.6e-63 248.4 665 38.2
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 4.7e-63 246.9 536 30.4
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 6.2e-63 246.5 614 39.9
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.6e-58 231.9 656 37.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.1e-54 217.6 698 37.7
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 6.8e-54 216.5 531 30.5
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 3.4e-53 214.2 542 43.0
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 3.5e-50 204.1 466 33.0
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 1.0e-49 202.6 669 34.5
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 5.1e-49 200.3 453 30.7
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 4.7e-47 193.7 406 31.3
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.2e-42 179.1 540 40.6
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 3.5e-42 177.6 525 28.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 5.1e-41 173.7 454 29.1
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 7.3e-40 169.9 448 27.7
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.9e-36 157.9 235 35.7
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.8e-33 148.7 431 45.0
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 5.1e-33 147.1 619 27.6
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.9e-32 145.2 454 27.5
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.4e-32 143.3 315 33.3
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 9.6e-32 142.9 211 39.3
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 1.4e-27 129.0 643 23.8
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.2e-26 125.9 442 25.8
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 1.3e-23 115.9 269 57.6
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.5e-21 109.0 122 49.2
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 9.3e-19 99.8 176 33.5
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.2e-18 99.4 338 46.2
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.1e-16 92.8 65 64.6
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 5.7e-16 90.5 61 67.2
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 9.6e-16 89.7 56 71.4
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-12 79.3 46 73.9
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 1.9e-08 65.5 80 43.8
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 9.7e-08 63.2 64 54.7
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.4e-06 59.3 88 36.4
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 5.3e-06 57.4 90 38.9


User provided reference genes

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