Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025333 Vanilla planifolia HOM05D006746 ORTHO05D007812 2.0e-88 328.9 156 100.0
HPP92_025331 Vanilla planifolia HOM05D006746 ORTHO05D007812 7.0e-20 101.3 88 68.2
HPP92_025330 Vanilla planifolia HOM05D006746 ORTHO05D007812 6.3e-13 78.2 35 100.0
Potri.017G007500 Populus trichocarpa HOM05D006746 ORTHO05D007812 2.4e-12 76.3 91 44.0
TAR636G2588 Trochodendron aralioides HOM05D006746 ORTHO05D007812 1.2e-11 73.9 100 43.0
DCAR_024795 Daucus carota HOM05D006746 ORTHO05D007812 4.5e-11 72.0 72 45.8
Sabra17G0008400 Salix brachista HOM05D006746 ORTHO05D007812 4.5e-11 72.0 91 42.9
Nn1g09428 Nelumbo nucifera HOM05D006746 ORTHO05D007812 5.9e-11 71.6 35 88.6
Aqoxy2G01227 Aquilegia oxysepala HOM05D006746 ORTHO05D007812 7.7e-11 71.2 35 85.7
Aa31LG1G25670 Aethionema arabicum HOM05D006746 ORTHO05D007812 1.0e-10 70.9 64 53.1
Duzib128G1730 Durio zibethinus HOM05D006746 ORTHO05D007812 1.0e-10 70.9 35 91.4
Prupe.7G270000 Prunus persica HOM05D006746 ORTHO05D007812 1.0e-10 70.9 117 41.9
CDE02G0327 Ceratophyllum demersum HOM05D006746 ORTHO05D007812 1.7e-10 70.1 35 85.7
Gohir.A10G192500 Gossypium hirsutum HOM05D006746 ORTHO05D007812 1.7e-10 70.1 35 85.7
Gohir.D10G200400 Gossypium hirsutum HOM05D006746 ORTHO05D007812 1.7e-10 70.1 35 85.7
Gorai.011G224600 Gossypium raimondii HOM05D006746 ORTHO05D007812 1.7e-10 70.1 35 85.7
Oeu007388.1 Olea europaea HOM05D006746 ORTHO05D007812 1.7e-10 70.1 69 49.3
SalBow3G0778 Salvia bowleyana HOM05D006746 ORTHO05D007812 1.7e-10 70.1 35 82.9
Lju470C3G4 Lonicera japonica HOM05D006746 ORTHO05D007812 2.2e-10 69.7 68 54.4
AUR62002485 Chenopodium quinoa HOM05D006746 ORTHO05D007812 2.9e-10 69.3 35 85.7
FvH4_1g00201 Fragaria vesca HOM05D006746 ORTHO05D007812 2.9e-10 69.3 69 50.7
PSO675G5098 Papaver somniferum HOM05D006746 ORTHO05D007812 2.9e-10 69.3 35 85.7
PSO732G0193 Papaver somniferum HOM05D006746 ORTHO05D007812 2.9e-10 69.3 35 85.7
TWI15G0215 Tripterygium wilfordii HOM05D006746 ORTHO05D007812 2.9e-10 69.3 35 85.7
vmacro05599 Vaccinium macrocarpon HOM05D006746 ORTHO05D007812 2.9e-10 69.3 116 36.2
Glyma.11G218500 Glycine max HOM05D006746 ORTHO05D007812 3.8e-10 68.9 35 82.9
Glyma.18G038800 Glycine max HOM05D006746 ORTHO05D007812 3.8e-10 68.9 35 82.9
Medtr3g067725 Medicago truncatula HOM05D006746 ORTHO05D007812 3.8e-10 68.9 35 82.9
Zm00001eb318540 Zea mays HOM05D006746 ORTHO05D007812 3.8e-10 68.9 35 77.1
EL10Ac3g06170 Beta vulgaris HOM05D006746 ORTHO05D007812 5.0e-10 68.6 35 82.9
CANSAT54G1618 Cannabis sativa HOM05D006746 ORTHO05D007812 5.0e-10 68.6 68 51.5
FAN28G2345 Fragaria x ananassa HOM05D006746 ORTHO05D007812 5.0e-10 68.6 69 50.7
Thecc.05G001600 Theobroma cacao HOM05D006746 ORTHO05D007812 5.0e-10 68.6 35 85.7
VMungo1383G0626 Vigna mungo HOM05D006746 ORTHO05D007812 5.0e-10 68.6 35 82.9
GSVIVG01038252001 Vitis vinifera HOM05D006746 ORTHO05D007812 5.0e-10 68.6 35 85.7
Actinidia18395 Actinidia chinensis HOM05D006746 ORTHO05D007812 6.5e-10 68.2 68 51.5
AL4G42860 Arabidopsis lyrata HOM05D006746 ORTHO05D007812 6.5e-10 68.2 64 51.6
Migut.F01782 Erythranthe guttata HOM05D006746 ORTHO05D007812 6.5e-10 68.2 35 80.0
PGR042G1380 Punica granatum HOM05D006746 ORTHO05D007812 6.5e-10 68.2 70 47.1
Sc13g0007590 Simmondsia chinensis HOM05D006746 ORTHO05D007812 6.5e-10 68.2 41 73.2
Ah.13g073160 Amaranthus hybridus HOM05D006746 ORTHO05D007812 8.5e-10 67.8 35 82.9
C04p04900 Brassica napus HOM05D006746 ORTHO05D007812 8.5e-10 67.8 35 77.1
BolC4t22120H Brassica oleracea HOM05D006746 ORTHO05D007812 8.5e-10 67.8 35 77.1
QL10p064381 Quercus lobata HOM05D006746 ORTHO05D007812 8.5e-10 67.8 58 60.3
QL10p064455 Quercus lobata HOM05D006746 ORTHO05D007812 8.5e-10 67.8 58 60.3
THA.LOC104802347 Tarenaya hassleriana HOM05D006746 ORTHO05D007812 8.5e-10 67.8 103 40.8
A05p04130 Brassica napus HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 74.3
BraA05t19399Z Brassica rapa HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 74.3
Cpa.g.sc26.211 Carica papaya HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 82.9
COL.COLO4_28973 Corchorus olitorius HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 82.9
Lalb_Chr15g0084751 Lupinus albus HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 80.0
Sed0026330 Sechium edule HOM05D006746 ORTHO05D007812 1.1e-09 67.4 99 41.4
TPR.G15849 Trifolium pratense HOM05D006746 ORTHO05D007812 1.1e-09 67.4 35 80.0
unitig_578.g16366 Utricularia gibba HOM05D006746 ORTHO05D007812 1.1e-09 67.4 37 75.7
MSTRG.364 Avicennia marina HOM05D006746 ORTHO05D007812 1.5e-09 67.0 35 77.1
Ca_08165_v3 Cicer arietinum L. HOM05D006746 ORTHO05D007812 1.5e-09 67.0 35 80.0
HanXRQChr15g0495931 Helianthus annuus HOM05D006746 ORTHO05D007812 1.5e-09 67.0 35 80.0
Hma1.2p1_0108F.1_g052140 Hydrangea macrophylla HOM05D006746 ORTHO05D007812 1.5e-09 67.0 100 39.0
Lj4g0012651 Lotus japonicus HOM05D006746 ORTHO05D007812 1.5e-09 67.0 35 80.0
Rhsim09G0003500 Rhododendron simsii HOM05D006746 ORTHO05D007812 1.5e-09 67.0 70 47.1
AT2G43980 Arabidopsis thaliana HOM05D006746 ORTHO05D007812 1.9e-09 66.6 35 80.0
BcaC02g12348 Brassica carinata HOM05D006746 ORTHO05D007812 1.9e-09 66.6 35 77.1
Carub.0004s2654 Capsella rubella HOM05D006746 ORTHO05D007812 1.9e-09 66.6 35 80.0
Cc03_g15960 Coffea canephora HOM05D006746 ORTHO05D007812 1.9e-09 66.6 35 82.9
Haze_05918 Corylus avellana HOM05D003322 ORTHO05D007812 1.9e-09 66.6 47 70.2
Haze_11128 Corylus avellana HOM05D006746 ORTHO05D007812 1.9e-09 66.6 47 70.2
RcHm_v2.0_Chr2g0084491 Rosa chinensis HOM05D006746 ORTHO05D007812 1.9e-09 66.6 47 66.0
Sp4g26070 Schrenkiella parvula HOM05D006746 ORTHO05D007812 1.9e-09 66.6 35 74.3
MD15G1143000 Malus domestica HOM05D006746 ORTHO05D007812 2.5e-09 66.2 56 60.7
Dinv33247 Davidia involucrata HOM05D006746 ORTHO05D007812 3.2e-09 65.9 50 62.0
Os09g0518700 Oryza sativa ssp. japonica HOM05D006746 ORTHO05D007812 3.2e-09 65.9 35 80.0
Peaxi162Scf01205g00172 Petunia axillaris HOM05D006746 ORTHO05D007812 3.2e-09 65.9 35 80.0
Psat0s3469g0080 Pisum sativum HOM05D006746 ORTHO05D007812 3.2e-09 65.9 35 80.0
Cfa008516 Carpinus fangiana HOM05D006746 ORTHO05D007812 4.2e-09 65.5 47 68.1
ClCG09G016590 Citrullus lanatus HOM05D006746 ORTHO05D007812 4.2e-09 65.5 102 39.2
ECA232G4866 Erigeron canadensis HOM05D006746 ORTHO05D007812 4.2e-09 65.5 35 80.0
Manes.01G009900 Manihot esculenta HOM05D006746 ORTHO05D007812 4.2e-09 65.5 35 77.1
CARHR139150 Cardamine hirsuta HOM05D006746 ORTHO05D007812 5.5e-09 65.1 35 80.0
Ciclev10019447m.g Citrus clementina HOM05D006746 ORTHO05D007812 5.5e-09 65.1 35 85.7
MELO3C018577.2 Cucumis melo HOM05D006746 ORTHO05D007812 5.5e-09 65.1 103 41.7
AUR62023707 Chenopodium quinoa HOM05D006746 ORTHO05D007812 7.2e-09 64.7 35 80.0
Lsat_1_v5_gn_4_139881 Lactuca sativa HOM05D006746 ORTHO05D007812 7.2e-09 64.7 35 77.1
Nitab4.5_0000013g0050 Nicotiana tabacum HOM05D006746 ORTHO05D007812 7.2e-09 64.7 35 77.1
Nitab4.5_0002395g0070 Nicotiana tabacum HOM05D006746 ORTHO05D007812 7.2e-09 64.7 35 77.1
Hund22598 Selenicereus undatus HOM05D006746 ORTHO05D007812 7.2e-09 64.7 35 77.1
Atru.chr3.1993 Acer truncatum HOM05D006746 ORTHO05D007812 9.4e-09 64.3 35 80.0
SHI01253 Sapria himalayana HOM05D006746 ORTHO05D007812 9.4e-09 64.3 35 71.4
Eucgr.A00429 Eucalyptus grandis HOM05D006746 ORTHO05D007812 1.2e-08 63.9 35 74.3
Thhalv10001421m.g Eutrema salsugineum HOM05D006746 ORTHO05D007812 1.2e-08 63.9 35 77.1
FAN26G2233 Fragaria x ananassa HOM05D001906 ORTHO05D007812 1.2e-08 63.9 35 77.1
FAN26G2252 Fragaria x ananassa HOM05D001906 ORTHO05D007812 1.2e-08 63.9 35 77.1
CSS0002331 Camellia sinensis var. sinensis HOM05D006746 ORTHO05D007812 1.6e-08 63.5 35 77.1
CiPaw.02G124900 Carya illinoinensis HOM05D006746 ORTHO05D007812 1.6e-08 63.5 50 54.0
Phvul.001G232000 Phaseolus vulgaris HOM05D006746 ORTHO05D007812 1.6e-08 63.5 35 80.0
arahy.Tifrunner.gnm1.ann1.33LTA3 Arachis hypogaea HOM05D006746 ORTHO05D007812 2.1e-08 63.2 35 74.3
arahy.Tifrunner.gnm1.ann1.40HSEN Arachis hypogaea HOM05D006746 ORTHO05D007812 2.1e-08 63.2 35 74.3
CsaV3_7G007200 Cucumis sativus L. HOM05D006746 ORTHO05D007812 2.1e-08 63.2 35 74.3
Solyc08g015630.3 Solanum lycopersicum HOM05D006746 ORTHO05D007812 2.7e-08 62.8 56 58.9
ATR0743G246 Amborella trichopoda HOM05D006746 ORTHO05D007812 3.6e-08 62.4 35 77.1
arahy.Tifrunner.gnm1.ann1.LQ4NH4 Arachis hypogaea HOM05D006746 ORTHO05D007812 3.6e-08 62.4 35 71.4
CAN.G607.8 Capsicum annuum HOM05D006746 ORTHO05D007812 3.6e-08 62.4 35 74.3
PGSC0003DMG400025215 Solanum tuberosum HOM05D006746 ORTHO05D007812 3.6e-08 62.4 35 74.3
SGA_v2.0_scaffold71G24025 Striga asiatica HOM05D006746 ORTHO05D007812 3.6e-08 62.4 36 72.2
arahy.Tifrunner.gnm1.ann1.AQI9IU Arachis hypogaea HOM05D006746 ORTHO05D007812 4.7e-08 62.0 35 71.4
Eucgr.L02782 Eucalyptus grandis HOM05D006746 ORTHO05D007812 4.7e-08 62.0 54 57.4
Sopen08g005630 Solanum pennellii HOM05D006746 ORTHO05D007812 4.7e-08 62.0 35 74.3
AagrBONN_evm.TU.Sc2ySwM_362.1591 Anthoceros agrestis HOM05D006746 ORTHO05D007812 8.0e-08 61.2 35 68.6
MD00G1087100 Malus domestica HOM05D006746 ORTHO05D007812 1.4e-07 60.5 49 61.2
Mapoly0002s0194 Marchantia polymorpha HOM05D006746 ORTHO05D007812 3.0e-07 59.3 52 50.0
CBR_g3607 Chara braunii HOM05D006746 ORTHO05D007812 2.6e-06 56.2 35 57.1


User provided reference genes

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