Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.0e-93 346.7 171 100.0
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-92 342.8 168 100.0
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.1e-90 334.7 168 98.2
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 8.4e-43 177.6 160 53.8
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.2e-41 173.7 162 53.1
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.1e-41 172.9 161 51.6
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 4.6e-41 171.8 154 53.9
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.0e-40 170.6 162 50.0
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.3e-40 170.2 155 53.5
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.3e-40 170.2 161 47.8
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 3.9e-40 168.7 152 52.6
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 3.9e-40 168.7 160 48.1
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 6.6e-40 167.9 156 51.9
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 8.7e-40 167.5 163 50.3
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 2.5e-39 166.0 161 49.7
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 7.3e-39 164.5 161 49.7
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 9.6e-39 164.1 154 50.6
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 2.8e-38 162.5 156 51.3
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 4.8e-38 161.8 160 47.5
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 6.2e-38 161.4 154 46.8
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 8.1e-38 161.0 153 52.9
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.8e-37 159.8 159 47.8
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.4e-37 159.5 154 48.7
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 2.4e-37 159.5 160 47.5
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 4.0e-37 158.7 154 47.4
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 4.0e-37 158.7 160 46.9
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 5.3e-37 158.3 152 49.3
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 6.9e-37 157.9 156 48.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 9.0e-37 157.5 163 44.8
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.2e-36 157.1 163 49.7
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.2e-36 157.1 155 49.7
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.0e-36 156.4 153 49.0
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.6e-36 156.0 159 47.8
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.6e-36 156.0 158 50.0
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.6e-36 156.0 158 50.0
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.6e-36 156.0 158 50.0
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 3.4e-36 155.6 163 44.8
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 3.4e-36 155.6 163 44.2
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.4e-36 155.6 158 46.8
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 5.8e-36 154.8 156 47.4
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 7.6e-36 154.5 158 49.4
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 7.6e-36 154.5 154 50.0
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 9.9e-36 154.1 163 45.4
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 9.9e-36 154.1 158 48.1
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 9.9e-36 154.1 157 48.4
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.7e-35 153.3 156 46.8
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 1.7e-35 153.3 154 50.6
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 2.2e-35 152.9 157 47.8
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 3.8e-35 152.1 156 49.4
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 8.4e-35 151.0 156 48.7
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 8.4e-35 151.0 159 45.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 8.4e-35 151.0 159 45.9
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 8.4e-35 151.0 162 43.2
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.4e-34 150.2 150 46.7
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.4e-34 150.2 162 43.2
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.9e-34 149.8 156 46.8
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 4.2e-34 148.7 156 44.2
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 4.2e-34 148.7 156 44.2
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 7.1e-34 147.9 155 45.2
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 9.3e-34 147.5 160 46.2
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.2e-33 147.1 163 44.2
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 2.1e-33 146.4 156 46.8
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 3.5e-33 145.6 156 45.5
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 7.8e-33 144.4 155 43.9
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 7.8e-33 144.4 216 37.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.3e-32 143.7 159 44.7
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 3.9e-32 142.1 154 43.5
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 6.6e-32 141.4 169 44.4
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.1e-31 140.6 154 46.8
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 3.3e-31 139.0 156 46.2
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 4.3e-31 138.7 154 42.2
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 9.6e-31 137.5 158 44.3
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.6e-30 136.7 153 46.4
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 2.8e-30 136.0 157 42.7
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 4.8e-30 135.2 155 41.9
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.4e-29 133.7 157 43.3
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.3e-29 131.7 158 44.3
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 1.2e-28 130.6 160 41.2
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.5e-28 130.2 158 43.7
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 2.0e-28 129.8 158 41.8
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.6e-28 129.4 163 41.7
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 3.8e-27 125.6 159 42.1
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.8e-27 125.6 156 41.7
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 4.9e-27 125.2 162 38.9
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 6.4e-27 124.8 159 42.8
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 6.4e-27 124.8 159 42.8
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.9e-26 123.2 153 42.5
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 1.9e-26 123.2 133 47.4
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.9e-26 123.2 153 43.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 1.9e-26 123.2 159 41.5
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 1.9e-26 123.2 159 41.5
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 1.9e-26 123.2 159 41.5
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.9e-26 123.2 156 41.7
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 2.4e-26 122.9 162 38.9
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 2.4e-26 122.9 149 44.3
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 2.7e-25 119.4 156 39.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.3e-24 117.1 154 37.0
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 2.3e-24 116.3 152 45.4
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 3.9e-24 115.5 154 39.0
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 8.7e-24 114.4 143 43.4
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.2e-22 108.2 154 40.3
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 6.2e-22 108.2 156 39.7
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 5.3e-21 105.1 156 37.2
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.2e-20 104.0 220 28.6
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 5.8e-20 101.7 220 27.7
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 3.2e-18 95.9 78 55.1
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 4.2e-18 95.5 87 49.4
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.1e-15 87.4 64 57.8
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.9e-15 86.7 79 54.4
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.3e-15 85.9 136 33.8
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.6e-14 83.6 110 42.7
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.1e-13 80.9 148 35.1
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 1.4e-13 80.5 144 30.6
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.4e-13 79.7 71 56.3
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.5e-12 75.5 76 43.4
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 5.8e-12 75.1 78 42.3
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 7.6e-12 74.7 84 46.4
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 7.9e-09 64.7 83 33.7


User provided reference genes

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