Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 5.2e-122 441.0 220 100.0
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 6.6e-16 88.6 152 33.6
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.9e-15 87.0 74 56.8
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 3.3e-15 86.3 140 37.9
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 4.3e-15 85.9 143 37.8
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 2.8e-14 83.2 69 56.5
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 4.7e-14 82.4 68 58.8
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 4.7e-14 82.4 68 58.8
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 4.7e-14 82.4 147 37.4
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 6.2e-14 82.0 88 51.1
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.0e-13 81.3 109 42.2
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.0e-13 81.3 145 34.5
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 1.0e-13 81.3 119 39.5
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.8e-13 80.5 122 37.7
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.8e-13 80.5 90 47.8
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.8e-13 80.5 141 35.5
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 1.8e-13 80.5 82 50.0
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 1.8e-13 80.5 111 43.2
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 2.3e-13 80.1 134 38.8
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.3e-13 80.1 76 52.6
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 2.3e-13 80.1 76 52.6
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 2.3e-13 80.1 139 36.0
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 3.1e-13 79.7 75 53.3
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 3.1e-13 79.7 143 35.7
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 4.0e-13 79.3 112 42.0
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 4.0e-13 79.3 122 36.9
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 4.0e-13 79.3 76 52.6
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 5.2e-13 79.0 116 43.1
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 6.8e-13 78.6 122 40.2
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 8.9e-13 78.2 63 58.7
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 8.9e-13 78.2 119 37.8
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 1.2e-12 77.8 123 40.7
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 1.2e-12 77.8 88 48.9
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 1.2e-12 77.8 145 31.7
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 1.2e-12 77.8 74 51.4
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 1.2e-12 77.8 113 40.7
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.2e-12 77.8 84 50.0
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 1.5e-12 77.4 68 55.9
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.5e-12 77.4 83 48.2
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 2.0e-12 77.0 84 46.4
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 2.0e-12 77.0 141 31.9
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 2.0e-12 77.0 141 35.5
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 2.0e-12 77.0 85 48.2
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 2.6e-12 76.6 64 59.4
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 2.6e-12 76.6 129 36.4
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 3.4e-12 76.3 84 46.4
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 3.4e-12 76.3 132 37.1
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 3.4e-12 76.3 133 38.3
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 3.4e-12 76.3 88 46.6
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 3.4e-12 76.3 83 45.8
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 3.4e-12 76.3 74 51.4
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 4.4e-12 75.9 71 52.1
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 4.4e-12 75.9 139 33.8
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 4.4e-12 75.9 139 33.8
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 4.4e-12 75.9 144 34.7
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 4.4e-12 75.9 82 47.6
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 4.4e-12 75.9 69 55.1
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 5.8e-12 75.5 83 45.8
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 5.8e-12 75.5 84 50.0
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 7.5e-12 75.1 64 54.7
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 7.5e-12 75.1 140 38.6
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 7.5e-12 75.1 137 34.3
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 7.5e-12 75.1 83 47.0
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 9.8e-12 74.7 91 44.0
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 9.8e-12 74.7 79 49.4
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 1.3e-11 74.3 69 50.7
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 1.3e-11 74.3 101 43.6
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.3e-11 74.3 120 40.0
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 1.3e-11 74.3 91 46.2
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 2.2e-11 73.6 74 47.3
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 2.9e-11 73.2 69 52.2
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 2.9e-11 73.2 85 42.4
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 2.9e-11 73.2 79 48.1
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 2.9e-11 73.2 139 35.3
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 2.9e-11 73.2 89 47.2
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 2.9e-11 73.2 74 48.6
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 3.7e-11 72.8 67 50.7
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 6.4e-11 72.0 66 51.5
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 6.4e-11 72.0 69 50.7
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.1e-10 71.2 141 34.8
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.1e-10 71.2 68 48.5
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.4e-10 70.9 68 47.1
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 1.9e-10 70.5 124 32.3
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 2.4e-10 70.1 68 48.5
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 2.4e-10 70.1 68 47.1
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 2.4e-10 70.1 68 47.1
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 4.1e-10 69.3 68 45.6
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 4.1e-10 69.3 68 47.1
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 5.4e-10 68.9 77 45.5
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 7.0e-10 68.6 83 42.2
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 7.0e-10 68.6 84 41.7
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 7.0e-10 68.6 84 41.7
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 7.0e-10 68.6 68 47.1
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 7.0e-10 68.6 82 42.7
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 7.0e-10 68.6 82 42.7
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 9.2e-10 68.2 83 42.2
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 9.2e-10 68.2 83 42.2
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 9.2e-10 68.2 83 39.8
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 1.2e-09 67.8 64 50.0
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 2.0e-09 67.0 63 52.4
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 2.7e-09 66.6 65 47.7
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 6.0e-09 65.5 170 31.2
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 7.8e-09 65.1 87 39.1
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.7e-08 63.9 82 42.7
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.1e-07 61.2 68 41.2
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 4.3e-07 59.3 57 52.6
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 2.1e-06 57.0 55 50.9


User provided reference genes

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