Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.7e-181 639.4 368 100.0
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.8e-175 619.4 368 97.8
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 5.2e-90 335.5 168 98.2
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 3.7e-64 249.6 244 50.8
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 2.0e-62 243.8 241 47.3
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.6e-62 242.7 251 48.2
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 6.0e-62 242.3 249 47.4
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 8.6e-61 238.4 245 48.6
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 8.6e-61 238.4 234 48.7
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.9e-60 237.3 243 49.0
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 7.3e-60 235.3 246 46.7
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 2.1e-59 233.8 253 45.5
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 4.7e-59 232.6 242 45.9
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.3e-58 230.3 243 45.3
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 4.0e-58 229.6 236 48.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 8.9e-58 228.4 243 50.2
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 8.9e-58 228.4 244 45.5
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.2e-57 228.0 249 45.8
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.2e-57 228.0 247 45.7
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 3.4e-57 226.5 249 47.0
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 5.8e-57 225.7 245 46.5
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.3e-56 224.6 248 44.0
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.2e-56 223.8 249 46.6
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 2.9e-56 223.4 250 45.6
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 6.4e-56 222.2 247 45.3
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 6.4e-56 222.2 243 47.7
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.1e-55 221.5 243 46.9
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.9e-55 220.7 245 43.7
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.9e-55 220.7 245 44.9
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 3.2e-55 219.9 248 44.4
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 4.1e-55 219.5 249 44.6
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 5.4e-55 219.2 243 45.3
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 9.2e-55 218.4 250 46.4
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 2.1e-54 217.2 245 41.6
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.1e-54 217.2 247 45.7
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 6.0e-54 215.7 242 45.5
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 7.8e-54 215.3 250 44.4
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 1.0e-53 214.9 248 43.5
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.3e-53 214.5 244 44.3
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 1.3e-53 214.5 241 46.5
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 1.7e-53 214.2 246 44.7
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 1.7e-53 214.2 225 46.2
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.7e-53 214.2 245 41.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 3.9e-53 213.0 247 45.3
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 8.6e-53 211.8 243 44.0
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 8.6e-53 211.8 242 45.9
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.1e-52 211.5 238 44.1
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.9e-52 210.7 245 42.0
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 1.9e-52 210.7 247 43.7
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.5e-52 210.3 246 41.9
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 9.5e-52 208.4 242 43.4
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 1.2e-51 208.0 245 42.4
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 2.1e-51 207.2 254 41.7
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.7e-51 206.1 252 42.5
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 8.1e-51 205.3 240 43.8
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 2.0e-49 200.7 238 43.7
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 3.4e-49 199.9 244 43.9
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 4.4e-49 199.5 242 42.6
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 7.5e-49 198.7 252 41.7
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 7.5e-49 198.7 243 41.6
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 7.5e-49 198.7 245 42.9
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 1.3e-48 198.0 244 41.0
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 2.2e-48 197.2 246 39.8
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 4.9e-48 196.1 243 42.8
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 4.9e-48 196.1 240 41.7
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 6.4e-48 195.7 244 41.4
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 8.3e-48 195.3 252 41.7
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 9.2e-47 191.8 250 42.4
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 3.5e-46 189.9 249 40.2
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 6.0e-46 189.1 250 42.8
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 6.0e-46 189.1 250 42.8
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 1.7e-45 187.6 246 39.4
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.3e-45 187.2 250 40.8
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 2.3e-45 187.2 245 39.2
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 3.0e-45 186.8 250 42.0
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 3.0e-45 186.8 250 42.0
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.9e-45 186.4 256 38.7
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 5.1e-45 186.0 249 42.2
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.6e-45 185.7 252 40.9
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 6.6e-45 185.7 251 41.0
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 8.6e-45 185.3 246 41.1
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.9e-44 184.1 249 38.6
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.9e-44 184.1 241 38.6
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 2.5e-44 183.7 240 40.0
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 2.5e-44 183.7 235 41.7
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.6e-43 181.0 251 40.2
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.4e-42 177.9 240 41.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.2e-40 170.6 227 40.1
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.4e-39 167.9 307 31.9
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 9.2e-39 165.2 193 46.1
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 2.1e-38 164.1 244 37.3
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 5.1e-37 159.5 314 30.3
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.1e-36 158.3 160 46.2
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.5e-36 157.9 240 41.7
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.5e-36 157.1 248 37.9
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 7.3e-36 155.6 252 36.1
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 6.2e-35 152.5 221 37.6
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 1.1e-34 151.8 142 51.4
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 1.8e-34 151.0 167 43.7
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.8e-34 151.0 167 44.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.4e-34 150.6 161 47.2
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.4e-31 141.4 259 34.4
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 6.0e-30 136.0 230 30.9
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 3.1e-26 123.6 133 47.4
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 3.1e-26 123.6 149 44.3
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 5.3e-26 122.9 156 41.7
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 3.4e-25 120.2 156 39.1
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 6.4e-24 115.9 143 43.4
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 2.4e-23 114.0 340 25.6
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.1e-18 97.1 87 50.6
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 2.6e-17 94.0 78 53.8
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 1.4e-15 88.2 64 57.8
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 9.3e-15 85.5 116 37.1
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 4.6e-14 83.2 88 47.7
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 4.6e-14 83.2 113 38.1
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.0e-13 80.5 110 41.8
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 3.0e-13 80.5 148 35.1
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.9e-13 80.1 71 56.3
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 5.6e-12 76.3 88 40.9
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 5.6e-12 76.3 64 53.1
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 7.6e-09 65.9 83 33.7


User provided reference genes

Program Settings