Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-182 642.9 368 100.0
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.4e-175 619.8 368 97.8
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.2e-92 342.4 168 100.0
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 6.4e-64 248.8 244 51.2
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 9.2e-63 245.0 249 47.8
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 1.2e-62 244.6 241 47.7
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.0e-61 241.5 251 48.2
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 6.6e-61 238.8 234 49.6
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 8.6e-61 238.4 242 48.8
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 1.1e-60 238.0 245 49.4
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 5.6e-60 235.7 250 44.8
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 5.6e-60 235.7 257 46.3
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.1e-59 233.8 252 45.6
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 2.8e-59 233.4 253 45.5
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 3.1e-58 229.9 244 45.9
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 5.2e-58 229.2 247 45.7
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 6.8e-58 228.8 249 46.2
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 1.2e-57 228.0 243 48.6
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.2e-57 228.0 237 48.5
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 2.6e-57 226.9 245 46.5
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 3.4e-57 226.5 251 45.0
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 4.4e-57 226.1 249 47.0
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 5.8e-57 225.7 248 44.8
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.7e-56 224.2 253 47.0
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 2.2e-56 223.8 249 43.4
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.2e-56 223.8 249 46.6
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 2.9e-56 223.4 250 45.6
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.1e-55 221.5 243 46.5
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.4e-55 221.1 248 44.4
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 3.2e-55 219.9 245 44.9
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 3.2e-55 219.9 251 41.4
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.2e-54 218.0 243 45.3
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.6e-54 217.6 245 46.1
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.6e-54 217.6 251 41.0
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.1e-54 217.2 242 45.5
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 2.1e-54 217.2 249 44.2
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.7e-54 216.9 247 46.2
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 4.6e-54 216.1 248 43.5
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 6.0e-54 215.7 241 45.2
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.0e-53 214.9 250 44.4
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.0e-53 214.9 243 46.5
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.7e-53 214.2 238 44.5
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.3e-53 213.8 244 44.3
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.3e-53 213.8 247 45.7
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 3.9e-53 213.0 244 44.7
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 5.1e-53 212.6 225 46.2
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 1.1e-52 211.5 243 43.2
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 3.3e-52 209.9 250 42.0
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 3.3e-52 209.9 247 43.7
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 4.3e-52 209.5 245 42.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 4.3e-52 209.5 246 41.9
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 5.6e-52 209.1 253 41.5
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.3e-52 208.8 252 42.9
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 4.7e-51 206.1 248 43.1
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 4.7e-51 206.1 254 41.7
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 8.9e-50 201.8 255 43.1
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.2e-49 201.4 252 42.1
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.2e-49 201.4 238 43.7
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.0e-49 200.7 242 42.6
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 2.6e-49 200.3 245 42.9
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.7e-48 197.6 252 42.1
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.2e-48 197.2 243 41.6
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 2.2e-48 197.2 244 41.0
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 3.7e-48 196.4 248 40.7
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 3.7e-48 196.4 246 39.8
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 8.3e-48 195.3 245 42.4
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.1e-47 194.9 243 42.8
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.2e-46 191.4 250 42.4
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.7e-46 190.3 248 40.7
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 7.8e-46 188.7 250 42.8
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 7.8e-46 188.7 250 42.8
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.3e-45 188.0 252 41.3
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.3e-45 188.0 251 41.4
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.3e-45 187.2 250 40.4
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 3.0e-45 186.8 246 39.4
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 3.9e-45 186.4 250 42.0
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 3.9e-45 186.4 250 42.0
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 3.9e-45 186.4 245 39.2
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.9e-45 186.4 245 41.6
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.9e-45 186.4 256 38.7
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 6.6e-45 185.7 249 42.2
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.1e-44 184.9 249 39.8
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.5e-44 184.5 240 40.0
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.9e-44 184.1 241 38.6
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 9.5e-44 181.8 235 41.3
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 4.7e-43 179.5 251 40.2
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.4e-42 177.9 240 41.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.9e-41 171.8 227 40.5
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.1e-39 168.3 307 31.9
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.2e-39 166.4 193 46.6
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 2.1e-38 164.1 244 37.3
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.0e-37 160.2 248 38.3
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.9e-36 157.5 160 46.2
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 3.3e-36 156.8 309 30.4
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 5.6e-36 156.0 240 42.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.6e-35 153.3 167 44.9
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.6e-35 153.3 221 38.0
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 4.7e-35 152.9 151 50.3
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 8.1e-35 152.1 252 34.9
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 1.8e-34 151.0 167 43.7
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 6.9e-34 149.1 161 47.2
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 2.2e-32 144.1 259 34.7
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 6.6e-29 132.5 230 30.4
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 4.0e-26 123.2 156 41.7
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 4.0e-26 123.2 149 44.3
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 6.9e-26 122.5 133 47.4
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 5.8e-25 119.4 156 39.1
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 2.4e-23 114.0 143 43.4
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.9e-21 106.7 340 24.4
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 9.0e-18 95.5 87 49.4
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.2e-17 95.1 78 55.1
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.5e-15 87.4 64 57.8
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 1.2e-14 85.1 116 37.1
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 4.6e-14 83.2 88 47.7
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 4.6e-14 83.2 110 42.7
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 4.6e-14 83.2 113 38.1
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 3.0e-13 80.5 148 35.1
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 5.1e-13 79.7 71 56.3
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 9.6e-12 75.5 88 40.9
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.3e-11 75.1 61 54.1
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 7.6e-09 65.9 83 33.7


User provided reference genes

Program Settings