Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025156 Vanilla planifolia HOM05D005760 ORTHO05D007113 2.4e-78 295.4 149 100.0
Aqoxy6G00127 Aquilegia oxysepala HOM05D005760 ORTHO05D007113 3.0e-20 102.4 67 70.1
TAR628G1581 Trochodendron aralioides HOM05D005760 ORTHO05D007113 5.1e-20 101.7 84 58.3
Lj4C496G3 Lonicera japonica HOM05D005760 ORTHO05D007113 1.1e-19 100.5 64 71.9
Lj4C503G3 Lonicera japonica HOM05D005760 ORTHO05D007113 1.1e-19 100.5 64 71.9
Dinv41715 Davidia involucrata HOM05D005760 ORTHO05D007113 1.9e-19 99.8 59 76.3
CSS0014231 Camellia sinensis var. sinensis HOM05D005760 ORTHO05D007113 2.5e-19 99.4 60 73.3
Cfa013846 Carpinus fangiana HOM05D005760 ORTHO05D007113 9.6e-19 97.4 67 67.2
Haze_22520 Corylus avellana HOM05D005760 ORTHO05D007113 9.6e-19 97.4 67 67.2
TWI34G1956 Tripterygium wilfordii HOM05D005760 ORTHO05D007113 9.6e-19 97.4 59 72.9
EL10Ac1g00088 Beta vulgaris HOM05D005760 ORTHO05D007113 1.6e-18 96.7 66 65.2
MD10G1047900 Malus domestica HOM05D005760 ORTHO05D007113 1.6e-18 96.7 61 70.5
Potri.019G083100 Populus trichocarpa HOM05D005760 ORTHO05D007113 1.6e-18 96.7 72 63.9
Prupe.8G057200 Prunus persica HOM05D005760 ORTHO05D007113 1.6e-18 96.7 66 68.2
Sabra19G0094600 Salix brachista HOM05D005760 ORTHO05D007113 1.6e-18 96.7 59 72.9
CANSAT78G0610 Cannabis sativa HOM05D005760 ORTHO05D007113 2.1e-18 96.3 59 74.6
CiPaw.08G058900 Carya illinoinensis HOM05D005760 ORTHO05D007113 2.1e-18 96.3 67 67.2
MD05G1041500 Malus domestica HOM05D005760 ORTHO05D007113 2.8e-18 95.9 61 70.5
QL02p033685 Quercus lobata HOM05D005760 ORTHO05D007113 2.8e-18 95.9 106 48.1
VMungo0720G1167 Vigna mungo HOM05D005760 ORTHO05D007113 3.6e-18 95.5 67 62.7
DCAR_001048 Daucus carota HOM05D005760 ORTHO05D007113 4.8e-18 95.1 59 74.6
FAN15G1969 Fragaria x ananassa HOM05D005760 ORTHO05D007113 6.2e-18 94.7 79 59.5
ATR0003G012 Amborella trichopoda HOM05D005760 ORTHO05D007113 8.1e-18 94.4 88 56.8
MELO3C008121.2 Cucumis melo HOM05D005760 ORTHO05D007113 8.1e-18 94.4 83 55.4
FvH4_2g11773 Fragaria vesca HOM05D005760 ORTHO05D007113 8.1e-18 94.4 78 57.7
FAN24G1577 Fragaria x ananassa HOM05D005760 ORTHO05D007113 8.1e-18 94.4 78 57.7
Phvul.007G245600 Phaseolus vulgaris HOM05D005760 ORTHO05D007113 8.1e-18 94.4 67 62.7
Sed0013995 Sechium edule HOM05D005760 ORTHO05D007113 8.1e-18 94.4 59 71.2
Manes.18G101200 Manihot esculenta HOM05D005760 ORTHO05D007113 1.1e-17 94.0 59 71.2
Actinidia23335 Actinidia chinensis HOM05D005760 ORTHO05D007113 1.4e-17 93.6 59 72.9
Ciclev10000028m.g Citrus clementina HOM05D005760 ORTHO05D007113 1.4e-17 93.6 62 67.7
CsaV3_2G033490 Cucumis sativus L. HOM05D005760 ORTHO05D007113 1.4e-17 93.6 84 57.1
RcHm_v2.0_Chr6g0272031 Rosa chinensis HOM05D005760 ORTHO05D007113 1.4e-17 93.6 78 57.7
Hund27088 Selenicereus undatus HOM05D005760 ORTHO05D007113 1.4e-17 93.6 77 61.0
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 1.4e-17 93.6 61 72.1
ClCG11G008140 Citrullus lanatus HOM05D005760 ORTHO05D007113 1.8e-17 93.2 72 63.9
Glyma.02G158100 Glycine max HOM05D005760 ORTHO05D007113 1.8e-17 93.2 67 61.2
Sopen06g023840 Solanum pennellii HOM05D005760 ORTHO05D007113 1.8e-17 93.2 59 69.5
Thecc.08G184000 Theobroma cacao HOM05D005760 ORTHO05D007113 1.8e-17 93.2 59 69.5
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea HOM05D005760 ORTHO05D007113 2.4e-17 92.8 67 62.7
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea HOM05D005760 ORTHO05D007113 2.4e-17 92.8 67 62.7
Duzib116G0663 Durio zibethinus HOM05D005760 ORTHO05D007113 2.4e-17 92.8 59 69.5
Lsat_1_v5_gn_1_10440 Lactuca sativa HOM05D005760 ORTHO05D007113 2.4e-17 92.8 63 66.7
AUR62004640 Chenopodium quinoa HOM05D005760 ORTHO05D007113 3.1e-17 92.4 66 62.1
Cc10_g10700 Coffea canephora HOM05D005760 ORTHO05D007113 3.1e-17 92.4 59 72.9
COL.COLO4_04233 Corchorus olitorius HOM05D005760 ORTHO05D007113 3.1e-17 92.4 83 53.0
Gohir.D05G253200 Gossypium hirsutum HOM05D005760 ORTHO05D007113 3.1e-17 92.4 59 69.5
Gorai.009G263800 Gossypium raimondii HOM05D005760 ORTHO05D007113 3.1e-17 92.4 59 69.5
Nitab4.5_0000303g0150 Nicotiana tabacum HOM05D005760 ORTHO05D007113 3.1e-17 92.4 59 67.8
Nitab4.5_0002500g0010 Nicotiana tabacum HOM05D005760 ORTHO05D007113 3.1e-17 92.4 59 67.8
Gohir.A05G250600 Gossypium hirsutum HOM05D005760 ORTHO05D007113 4.0e-17 92.0 91 52.7
Os01g0873800 Oryza sativa ssp. japonica HOM05D005760 ORTHO05D007113 4.0e-17 92.0 61 70.5
Solyc06g065360.3 Solanum lycopersicum HOM05D005760 ORTHO05D007113 4.0e-17 92.0 59 67.8
unitig_0.g276 Utricularia gibba HOM05D005760 ORTHO05D007113 4.0e-17 92.0 64 70.3
AUR62022696 Chenopodium quinoa HOM05D005760 ORTHO05D007113 5.3e-17 91.7 65 61.5
Rhsim06G0094000 Rhododendron simsii HOM05D005760 ORTHO05D007113 5.3e-17 91.7 59 69.5
Atru.chr13.1758 Acer truncatum HOM05D005760 ORTHO05D007113 6.9e-17 91.3 66 65.2
Peaxi162Scf00268g01123 Petunia axillaris HOM05D005760 ORTHO05D007113 6.9e-17 91.3 59 66.1
MSTRG.25441 Avicennia marina HOM05D005760 ORTHO05D007113 9.0e-17 90.9 75 65.3
GSVIVG01034473001 Vitis vinifera HOM05D005760 ORTHO05D007113 9.0e-17 90.9 59 69.5
vmacro12489 Vaccinium macrocarpon HOM05D005760 ORTHO05D007113 1.2e-16 90.5 76 61.8
Ah.05g178160 Amaranthus hybridus HOM05D005760 ORTHO05D007113 1.5e-16 90.1 65 63.1
Medtr1g050670 Medicago truncatula HOM05D005760 ORTHO05D007113 1.5e-16 90.1 67 59.7
AT1G35660 Arabidopsis thaliana HOM05D005760 ORTHO05D007113 2.0e-16 89.7 66 60.6
Eucgr.F04123 Eucalyptus grandis HOM05D005760 ORTHO05D007113 2.0e-16 89.7 92 50.0
PGR102G0553 Punica granatum HOM05D005760 ORTHO05D007113 2.0e-16 89.7 79 55.7
CAN.G199.9 Capsicum annuum HOM05D005760 ORTHO05D007113 2.6e-16 89.4 59 66.1
PSO170G3854 Papaver somniferum HOM05D005760 ORTHO05D007113 2.6e-16 89.4 88 52.3
Cpa.g.sc66.39 Carica papaya HOM05D005760 ORTHO05D007113 3.4e-16 89.0 55 70.9
Migut.C01256 Erythranthe guttata HOM05D005760 ORTHO05D007113 3.4e-16 89.0 84 57.1
Ca_11749_v3 Cicer arietinum L. HOM05D005760 ORTHO05D007113 4.5e-16 88.6 64 60.9
Psat6g094080 Pisum sativum HOM05D005760 ORTHO05D007113 4.5e-16 88.6 67 58.2
Carub.0001s3325 Capsella rubella HOM05D005760 ORTHO05D007113 5.8e-16 88.2 70 57.1
Oeu000547.3 Olea europaea HOM05D005760 ORTHO05D007113 7.6e-16 87.8 59 72.9
PSO782G3241 Papaver somniferum HOM05D005760 ORTHO05D007113 7.6e-16 87.8 88 51.1
Sp1g30370 Schrenkiella parvula HOM05D005760 ORTHO05D007113 7.6e-16 87.8 66 60.6
SpUn0216_0010 Schrenkiella parvula HOM05D005760 ORTHO05D007113 7.6e-16 87.8 66 60.6
Sc23g0001270 Simmondsia chinensis HOM05D005760 ORTHO05D007113 7.6e-16 87.8 74 56.8
Lj5g0008525 Lotus japonicus HOM05D005760 ORTHO05D007113 9.9e-16 87.4 64 59.4
THA.LOC104806788 Tarenaya hassleriana HOM05D005760 ORTHO05D007113 9.9e-16 87.4 71 60.6
Aa31LG6G8840 Aethionema arabicum HOM05D005760 ORTHO05D007113 1.3e-15 87.0 61 62.3
BcaC08g43328 Brassica carinata HOM05D005760 ORTHO05D007113 1.7e-15 86.7 59 64.4
A06p02320 Brassica napus HOM05D005760 ORTHO05D007113 1.7e-15 86.7 59 64.4
BraA06t23439Z Brassica rapa HOM05D005760 ORTHO05D007113 1.7e-15 86.7 59 64.4
C06p06840 Brassica napus HOM05D005760 ORTHO05D007113 2.2e-15 86.3 59 62.7
BolC6t35790H Brassica oleracea HOM05D005760 ORTHO05D007113 2.2e-15 86.3 59 62.7
Thhalv10001809m.g Eutrema salsugineum HOM05D005760 ORTHO05D007113 2.2e-15 86.3 66 59.1
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 2.2e-15 86.3 67 65.7
Hma1.2p1_0004F.1_g004050 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 2.2e-15 86.3 67 65.7
Lalb_Chr03g0036151 Lupinus albus HOM05D005760 ORTHO05D007113 2.2e-15 86.3 67 61.2
BcaB07g33624 Brassica carinata HOM05D005760 ORTHO05D007113 2.9e-15 85.9 70 55.7
Nn1g08372 Nelumbo nucifera HOM05D005760 ORTHO05D007113 2.9e-15 85.9 85 50.6
CARHR034440 Cardamine hirsuta HOM05D005760 ORTHO05D007113 3.8e-15 85.5 64 59.4
AL1G50540 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 4.9e-15 85.1 64 60.9
CDE08G1571 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 6.4e-15 84.7 61 65.6
SGA_v2.0_scaffold118G32485 Striga asiatica HOM05D005760 ORTHO05D007113 6.4e-15 84.7 59 66.1
SalBow7G4130 Salvia bowleyana HOM05D005760 ORTHO05D007113 1.1e-14 84.0 59 69.5
HanXRQChr04g0107521 Helianthus annuus HOM05D005760 ORTHO05D007113 7.1e-14 81.3 64 60.9
TPR.G22709 Trifolium pratense HOM05D005760 ORTHO05D007113 4.6e-13 78.6 77 51.9
ECA152G0004 Erigeron canadensis HOM05D005760 ORTHO05D007113 6.0e-13 78.2 61 59.0
Mapoly0036s0148 Marchantia polymorpha HOM05D005760 ORTHO05D007113 3.9e-12 75.5 110 41.8
SHI09011 Sapria himalayana HOM05D005760 ORTHO05D007113 3.9e-12 75.5 50 66.0
QL02p033652 Quercus lobata HOM05D005760 ORTHO05D007113 1.5e-11 73.6 56 60.7
Carub.0001s0936 Capsella rubella HOM05D005760 ORTHO05D007113 1.9e-11 73.2 59 54.2
SEGI_03904 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 1.9e-11 73.2 57 59.6
unitig_0.g275 Utricularia gibba HOM05D005760 ORTHO05D007113 5.6e-11 71.6 77 48.1
AL1G47130 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 7.4e-11 71.2 59 50.8
Pp3c15_6360 Physcomitrium patens HOM05D005760 ORTHO05D007113 1.6e-10 70.1 48 66.7
Pp3c15_6380 Physcomitrium patens HOM05D005760 ORTHO05D007113 1.6e-10 70.1 48 66.7
BolC6t35788H Brassica oleracea HOM05D005760 ORTHO05D007113 2.1e-10 69.7 74 48.6
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis HOM05D005760 ORTHO05D007113 6.9e-09 64.7 77 48.1
QL02p033674 Quercus lobata HOM05D005760 ORTHO05D007113 1.5e-08 63.5 58 51.7
Lj4A496G12 Lonicera japonica HOM05D005760 ORTHO05D007113 4.2e-06 55.5 77 40.3


User provided reference genes

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