Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025086 Vanilla planifolia HOM05D004499 ORTHO05D004928 2.4e-201 705.3 358 100.0
HPP92_001043 Vanilla planifolia HOM05D004499 ORTHO05D004928 9.0e-31 138.7 348 35.9
Zm00001eb265390 Zea mays HOM05D004499 ORTHO05D004928 9.7e-17 92.0 269 31.6
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 1.0e-13 82.0 339 29.5
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 8.5e-13 79.0 355 28.5
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 6.1e-11 72.8 257 31.1
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 2.3e-10 70.9 352 28.1
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 8.8e-10 68.9 340 28.8
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 1.5e-09 68.2 323 27.2
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 1.5e-09 68.2 334 26.3
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 1.5e-09 68.2 275 30.9
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 5.7e-09 66.2 355 28.5
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 7.4e-09 65.9 258 28.7
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 1.3e-08 65.1 363 26.4
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 1.3e-08 65.1 358 27.9
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 1.3e-08 65.1 328 29.6
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.7e-08 64.7 252 31.7
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 1.7e-08 64.7 345 30.1
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 1.7e-08 64.7 247 30.0
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 4.8e-08 63.2 349 26.6
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 4.8e-08 63.2 354 28.5
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 4.8e-08 63.2 357 28.0
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.1e-07 62.0 78 52.6
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 1.1e-07 62.0 353 27.2
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 1.4e-07 61.6 349 28.1
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 1.8e-07 61.2 325 26.2
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 2.4e-07 60.8 343 27.4
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 3.1e-07 60.5 345 28.1
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 3.1e-07 60.5 243 31.3
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 4.1e-07 60.1 358 26.3
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 4.1e-07 60.1 329 30.1
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 5.3e-07 59.7 256 27.3
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 7.0e-07 59.3 352 27.3
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 7.0e-07 59.3 334 29.9
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 7.0e-07 59.3 246 29.7
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 7.0e-07 59.3 259 27.8
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 9.1e-07 58.9 299 27.4
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 9.1e-07 58.9 79 43.0
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 9.1e-07 58.9 354 25.7
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 9.1e-07 58.9 257 29.2
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.2e-06 58.5 348 29.0
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 2.0e-06 57.8 342 24.9
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 2.0e-06 57.8 354 28.0
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 2.6e-06 57.4 252 28.2
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 2.6e-06 57.4 335 29.9
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 3.5e-06 57.0 366 27.6
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 3.5e-06 57.0 120 36.7
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 3.5e-06 57.0 252 29.0
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 3.5e-06 57.0 252 29.0
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 3.5e-06 57.0 252 29.4
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 3.5e-06 57.0 255 29.0
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 3.5e-06 57.0 255 29.0
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 3.5e-06 57.0 344 25.9
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 4.5e-06 56.6 363 26.7
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 5.9e-06 56.2 341 27.0
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 5.9e-06 56.2 81 46.9
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 7.7e-06 55.8 81 46.9
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 7.7e-06 55.8 94 43.6
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 7.7e-06 55.8 93 44.1
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 7.7e-06 55.8 93 44.1
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 7.7e-06 55.8 93 44.1
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 7.7e-06 55.8 346 26.3
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 7.7e-06 55.8 138 34.8
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 7.7e-06 55.8 329 27.1


User provided reference genes

Program Settings