Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025077 Vanilla planifolia HOM05D002890 ORTHO05D005855 0.0e+00 1137.9 611 100.0
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 0.0e+00 1092.0 647 92.7
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 4.8e-32 143.7 542 30.1
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 1.4e-31 142.1 508 28.9
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 7.6e-30 136.3 553 29.1
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 1.2e-27 129.0 620 30.8
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 3.5e-27 127.5 522 29.5
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 6.1e-27 126.7 522 29.1
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 6.1e-27 126.7 539 29.3
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 2.3e-26 124.8 529 27.4
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 3.9e-26 124.0 574 29.8
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 3.9e-26 124.0 537 30.4
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 6.7e-26 123.2 522 28.9
Actinidia10696 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.1e-25 122.5 564 29.6
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 5.7e-25 120.2 505 28.1
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 5.7e-25 120.2 515 28.9
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 5.7e-25 120.2 545 29.0
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 1.6e-24 118.6 521 31.5
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.1e-23 115.9 556 29.0
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 1.1e-23 115.9 506 27.9
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 2.4e-23 114.8 518 26.6
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 5.3e-23 113.6 522 29.3
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 5.3e-23 113.6 551 28.3
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 2.0e-22 111.7 511 27.6
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 2.6e-22 111.3 517 30.0
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 4.5e-22 110.5 549 30.4
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 4.5e-22 110.5 549 28.8
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 7.7e-22 109.8 521 29.2
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 7.7e-22 109.8 528 27.5
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 1.0e-21 109.4 521 29.0
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 1.3e-21 109.0 517 29.6
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 1.7e-21 108.6 518 27.4
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.7e-21 108.6 507 28.4
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 1.7e-21 108.6 491 29.7
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 5.0e-21 107.1 530 29.1
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 5.0e-21 107.1 512 28.5
Oeu002905.1 Olea europaea HOM05D002890 ORTHO05D005855 6.5e-21 106.7 462 28.4
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 8.5e-21 106.3 541 27.9
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 1.1e-20 105.9 677 25.8
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 1.9e-20 105.1 530 29.4
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 2.5e-20 104.8 537 25.9
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 2.5e-20 104.8 536 26.7
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 4.2e-20 104.0 529 28.7
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 5.5e-20 103.6 506 27.3
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 5.5e-20 103.6 517 29.2
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 5.5e-20 103.6 536 26.5
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 5.5e-20 103.6 509 28.1
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 1.2e-19 102.4 513 28.8
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 1.2e-19 102.4 548 27.4
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 2.1e-19 101.7 501 27.7
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 2.7e-19 101.3 520 27.1
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 4.6e-19 100.5 522 29.7
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 4.6e-19 100.5 531 28.6
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 4.6e-19 100.5 535 27.7
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 4.6e-19 100.5 514 27.4
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 4.6e-19 100.5 526 27.9
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 7.9e-19 99.8 542 27.3
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 1.0e-18 99.4 513 28.7
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 1.4e-18 99.0 520 27.7
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 1.4e-18 99.0 523 26.8
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.4e-18 99.0 514 28.2
SGA_v2.0_scaffold25G10747 Striga asiatica HOM05D002890 ORTHO05D005855 1.4e-18 99.0 490 28.0
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 1.8e-18 98.6 668 26.8
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 2.3e-18 98.2 540 27.8
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 3.9e-18 97.4 524 27.3
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 5.1e-18 97.1 520 26.9
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 1.1e-17 95.9 533 26.6
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 1.1e-17 95.9 509 27.1
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 1.5e-17 95.5 503 26.8
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 2.5e-17 94.7 518 27.8
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 7.4e-17 93.2 527 27.3
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 9.7e-17 92.8 514 27.4
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 1.7e-16 92.0 523 27.9
Atru.chr10.2228 Acer truncatum HOM05D002890 ORTHO05D005855 2.2e-16 91.7 438 29.9
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 2.8e-16 91.3 536 27.6
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 2.8e-16 91.3 542 27.1
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 3.7e-16 90.9 521 28.4
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 4.8e-16 90.5 537 26.3
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 4.8e-16 90.5 530 27.5
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 1.4e-15 89.0 530 27.5
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 3.1e-15 87.8 496 29.2
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 3.1e-15 87.8 498 27.3
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 3.1e-15 87.8 498 27.3
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 3.1e-15 87.8 496 29.2
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 3.1e-15 87.8 532 27.4
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 3.1e-15 87.8 519 25.6
BcaC04g22582 Brassica carinata HOM05D002890 ORTHO05D005855 2.6e-14 84.7 444 27.0
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 2.6e-14 84.7 524 26.3
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 3.4e-14 84.3 508 28.3
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 1.0e-13 82.8 394 27.2
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 1.7e-13 82.0 479 25.5
BcaB07g31476 Brassica carinata HOM05D002890 ORTHO05D005855 2.2e-13 81.6 352 28.1
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 2.9e-13 81.3 525 25.9
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 1.4e-12 79.0 190 40.0
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 3.2e-12 77.8 497 26.2
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 1.2e-11 75.9 354 27.1
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 2.7e-11 74.7 521 25.7
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 2.7e-11 74.7 568 24.3
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 2.7e-11 74.7 521 25.9
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 1.0e-10 72.8 519 26.8
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 1.4e-10 72.4 513 25.9
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 1.8e-10 72.0 506 25.7
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 2.3e-10 71.6 502 26.3
MD05G1347100 Malus domestica HOM05D002890 ORTHO05D005855 5.1e-10 70.5 254 28.3
Nitab4.5_0000267g0080 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.0e-09 68.6 151 39.7
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 1.7e-08 65.5 515 25.2
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 1.7e-08 65.5 487 27.3
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 2.2e-08 65.1 363 28.7
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 2.2e-08 65.1 350 25.4
SEGI_38151 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 2.2e-08 65.1 350 25.4
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 8.2e-08 63.2 213 34.7
SHI02204 Sapria himalayana HOM05D002890 ORTHO05D005855 9.1e-07 59.7 141 34.0
Potri.004G015034 Populus trichocarpa HOM05D002890 ORTHO05D005855 5.9e-06 57.0 176 33.0


User provided reference genes

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