Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.9e-110 402.5 208 100.0
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 1.9e-110 402.5 208 100.0
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 1.2e-70 270.4 187 71.1
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 3.4e-70 268.9 187 72.2
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 4.4e-70 268.5 187 72.2
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 4.4e-70 268.5 186 72.6
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 9.8e-70 267.3 187 70.6
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 9.8e-70 267.3 186 72.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 1.3e-69 266.9 186 70.4
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.7e-69 266.5 187 71.7
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.7e-69 266.5 187 71.7
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 1.7e-69 266.5 187 71.7
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.2e-69 266.2 189 70.4
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.2e-69 266.2 186 72.0
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 2.2e-69 266.2 187 70.6
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 3.7e-69 265.4 191 69.6
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 3.7e-69 265.4 186 69.9
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 3.1e-68 262.3 187 70.1
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 5.4e-68 261.5 187 69.5
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 5.4e-68 261.5 187 69.5
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 7.0e-68 261.2 187 69.5
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 9.1e-68 260.8 187 69.5
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 1.2e-67 260.4 186 70.4
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.2e-67 260.4 186 70.4
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.2e-67 260.4 186 70.4
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 1.6e-67 260.0 187 69.5
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-67 259.6 186 70.4
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.7e-67 259.2 186 70.4
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 2.7e-67 259.2 186 70.4
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 3.5e-67 258.8 187 68.4
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.0e-66 257.3 186 69.9
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.0e-66 257.3 186 69.9
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 1.0e-66 257.3 186 69.9
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 1.0e-66 257.3 186 68.8
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 1.0e-66 257.3 176 71.0
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.3e-66 256.9 184 69.0
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 1.3e-66 256.9 186 68.3
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.3e-66 256.9 184 69.6
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 1.7e-66 256.5 187 68.4
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.3e-66 256.1 187 69.0
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 8.6e-66 254.2 186 67.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 8.6e-66 254.2 184 69.0
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 8.6e-66 254.2 189 67.2
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 1.5e-65 253.4 187 67.4
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 1.9e-65 253.1 184 69.0
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 2.5e-65 252.7 187 66.8
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 2.5e-65 252.7 186 68.3
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 2.5e-65 252.7 189 67.2
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 2.5e-65 252.7 186 68.3
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 2.5e-65 252.7 188 68.6
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 5.5e-65 251.5 189 67.2
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 7.2e-65 251.1 184 69.0
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.2e-64 250.4 189 65.1
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 1.2e-64 250.4 184 66.3
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.6e-64 250.0 204 64.2
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 1.6e-64 250.0 186 68.3
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 2.1e-64 249.6 186 67.7
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 2.8e-64 249.2 184 67.9
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 4.7e-64 248.4 186 68.3
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 4.7e-64 248.4 186 67.7
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 6.1e-64 248.1 188 67.6
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.0e-63 247.3 184 65.8
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 1.8e-63 246.5 184 67.9
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 2.3e-63 246.1 186 65.6
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 2.3e-63 246.1 186 67.2
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.3e-63 246.1 186 67.2
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 4.0e-63 245.4 191 64.9
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 5.2e-63 245.0 187 67.4
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 5.2e-63 245.0 188 67.0
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 8.9e-63 244.2 188 67.0
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.2e-62 243.8 185 67.6
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 3.4e-62 242.3 187 65.2
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 3.4e-62 242.3 186 64.5
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 3.4e-62 242.3 187 63.1
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 7.5e-62 241.1 186 63.4
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 7.5e-62 241.1 186 63.4
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 7.5e-62 241.1 187 63.6
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 7.5e-62 241.1 187 63.6
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 7.5e-62 241.1 187 63.6
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 7.5e-62 241.1 187 63.6
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 9.8e-62 240.7 197 63.5
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.2e-61 239.6 186 65.1
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 3.7e-61 238.8 186 62.4
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.4e-60 236.9 186 64.0
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 4.1e-60 235.3 190 61.6
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 4.1e-60 235.3 190 61.6
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 4.1e-60 235.3 192 60.9
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 5.4e-60 235.0 191 61.3
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 2.0e-59 233.0 184 64.7
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.5e-59 232.3 188 61.2
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 6.6e-58 228.0 154 72.1
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 8.6e-58 227.6 182 63.2
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 1.2e-56 223.8 190 60.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.1e-56 221.5 184 60.9
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.4e-54 215.3 154 70.8
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.2e-53 213.0 160 66.9
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 1.9e-52 209.9 159 66.7
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.0e-51 206.5 186 59.1
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 1.1e-47 194.1 186 53.2
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.5e-46 190.3 184 57.1
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 1.3e-45 187.2 149 64.4
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 8.3e-45 184.5 188 50.0
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.7e-42 176.8 183 47.0
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.1e-41 174.1 184 49.5
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.7e-37 160.2 116 71.6
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 2.2e-37 159.8 116 70.7
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.6e-34 148.3 184 45.7
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 2.8e-32 142.9 130 55.4
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 1.2e-30 137.5 108 65.7
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.6e-26 121.7 182 42.3
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.1e-23 112.8 131 48.9
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 1.8e-15 87.0 97 50.5
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.4e-12 76.6 44 79.5
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 1.3e-10 70.9 73 52.1
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 3.1e-07 59.7 39 69.2


User provided reference genes

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