Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 0.0e+00 1203.7 655 100.0
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.3e-133 480.3 654 46.0
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.5e-132 477.6 654 45.7
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 7.4e-132 475.3 654 45.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 8.2e-131 471.9 667 43.9
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-127 461.5 655 44.3
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.6e-126 457.6 655 44.0
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.0e-125 454.9 666 44.0
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 3.3e-124 449.9 653 44.1
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 8.2e-123 445.3 646 43.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 8.2e-123 445.3 657 41.6
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.4e-122 444.5 652 43.3
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 4.1e-122 443.0 649 43.9
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 5.9e-121 439.1 661 43.4
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 7.7e-121 438.7 652 43.4
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.7e-121 438.7 677 41.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.0e-120 438.3 653 44.0
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.3e-120 438.0 647 43.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.9e-120 436.8 663 43.1
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 8.5e-120 435.3 668 42.1
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.1e-119 434.9 655 42.0
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 5.5e-119 432.6 652 42.5
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 2.7e-118 430.3 652 43.3
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.1e-118 429.1 654 41.9
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.0e-117 426.8 638 43.6
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.2e-116 424.9 684 41.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 2.0e-116 424.1 654 41.3
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.6e-116 423.7 655 43.1
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 7.5e-116 422.2 645 43.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.3e-115 421.4 637 43.0
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.7e-115 421.0 649 43.0
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 2.2e-115 420.6 654 41.4
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 3.7e-115 419.9 653 42.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 3.7e-115 419.9 655 44.9
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.1e-114 418.3 215 100.0
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 4.1e-114 416.4 632 42.1
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 7.0e-114 415.6 654 41.4
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 2.0e-113 414.1 644 42.5
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 2.7e-113 413.7 633 42.3
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.5e-113 412.9 708 39.7
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.0e-112 411.8 651 42.2
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.7e-112 411.0 679 39.8
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.2e-112 410.6 655 40.8
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.2e-112 410.6 656 42.5
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.2e-112 410.6 654 42.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.2e-112 410.6 690 40.4
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 6.5e-112 409.1 661 41.1
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 6.5e-112 409.1 637 45.8
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.5e-111 407.9 653 42.9
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.5e-111 407.9 656 42.5
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.5e-111 407.1 671 39.8
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.5e-111 407.1 671 39.8
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.6e-110 404.4 632 41.6
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 8.0e-110 402.1 639 40.7
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.0e-109 401.7 636 41.2
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 3.0e-109 400.2 640 40.2
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 3.0e-109 400.2 641 40.1
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 8.8e-109 398.7 654 41.1
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 5.7e-108 396.0 646 40.6
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 5.7e-108 396.0 647 39.7
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.1e-106 391.7 640 42.2
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.4e-106 390.6 764 36.8
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 2.0e-105 387.5 641 39.8
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 4.5e-105 386.3 645 39.8
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 5.9e-105 386.0 631 38.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 7.7e-105 385.6 639 39.7
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 8.6e-104 382.1 661 39.6
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.5e-103 381.3 790 35.7
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 7.3e-103 379.0 675 38.4
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.0e-101 375.2 675 37.9
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 4.0e-101 373.2 648 38.4
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.0e-100 370.9 675 37.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.3e-99 368.2 698 36.2
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 2.2e-99 367.5 639 38.7
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 5.4e-98 362.8 675 37.3
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.0e-96 358.6 596 41.4
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.3e-96 358.2 531 42.9
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.3e-96 358.2 649 38.5
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.7e-96 357.8 661 37.8
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 3.9e-96 356.7 635 38.6
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 4.3e-95 353.2 698 35.8
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.1e-94 350.9 599 40.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 3.4e-92 343.6 598 39.0
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 5.8e-92 342.8 455 44.8
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.9e-91 340.5 410 48.0
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.7e-91 340.1 479 44.5
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 4.1e-90 336.7 664 36.1
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.2e-89 335.1 454 46.5
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 4.6e-89 333.2 521 42.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.0e-88 332.0 670 36.6
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.6e-86 323.6 717 34.6
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 4.9e-83 313.2 626 35.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 4.6e-81 306.6 679 33.3
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.0e-80 305.4 512 42.8
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 4.0e-77 293.5 667 33.1
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 2.0e-76 291.2 648 34.0
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 2.4e-74 284.3 658 35.1
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 3.9e-64 250.4 527 35.3
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 4.6e-57 226.9 496 33.9
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.3e-56 224.6 845 27.2
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 6.7e-56 223.0 484 34.5
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 2.1e-54 218.0 497 33.0
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.1e-54 218.0 207 58.0
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 7.6e-52 209.5 433 35.1
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 2.1e-49 201.4 165 64.8
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.6e-47 193.4 465 32.3
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 6.2e-46 189.9 150 69.3
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.4e-42 178.7 803 25.2
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.3e-40 172.2 143 62.2
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.7e-38 164.1 745 27.2
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 6.5e-35 153.3 213 42.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 9.7e-31 139.4 276 36.2
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 5.5e-26 123.6 101 62.4
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 6.1e-25 120.2 276 35.9
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.5e-23 115.5 271 34.7
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.0e-19 102.8 78 69.2
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 8.5e-19 99.8 97 61.9
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.5e-18 97.1 103 56.3
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 5.5e-18 97.1 185 35.7
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.6e-17 95.5 171 35.7
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.1e-17 95.1 90 65.6
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.5e-10 71.6 86 44.2
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 9.4e-10 69.7 51 70.6
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 6.1e-09 67.0 47 72.3
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 9.7e-07 59.7 323 24.1


User provided reference genes

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