Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024789 Vanilla planifolia HOM05D004589 ORTHO05D005848 8.2e-132 473.8 248 100.0
HPP92_020312 Vanilla planifolia HOM05D004589 ORTHO05D005848 2.7e-98 362.5 262 72.5
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 8.9e-94 347.4 257 70.4
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 3.4e-93 345.5 257 71.2
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 7.0e-91 337.8 262 68.7
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 7.0e-91 337.8 256 70.3
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 4.5e-90 335.1 256 69.5
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 7.8e-90 334.3 256 69.1
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 1.0e-89 334.0 256 68.8
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 1.0e-89 334.0 256 69.5
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 2.3e-89 332.8 256 68.8
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.3e-89 332.8 256 68.8
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 5.0e-89 331.6 256 68.4
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 6.6e-89 331.3 256 68.0
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 8.6e-89 330.9 256 68.4
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 1.9e-88 329.7 256 68.8
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 4.3e-88 328.6 256 67.2
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 5.6e-88 328.2 256 67.2
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 5.6e-88 328.2 256 68.0
Gohir.D07G034300 Gossypium hirsutum HOM05D004589 ORTHO05D005848 5.6e-88 328.2 256 68.0
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 5.6e-88 328.2 256 68.0
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 7.3e-88 327.8 256 68.0
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 7.3e-88 327.8 256 68.0
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 7.3e-88 327.8 256 67.2
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 9.5e-88 327.4 256 67.2
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 1.2e-87 327.0 256 67.6
Actinidia14103 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.6e-87 326.6 256 67.6
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 1.6e-87 326.6 256 67.2
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 2.1e-87 326.2 256 66.8
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 4.7e-87 325.1 265 64.9
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 6.1e-87 324.7 256 66.8
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 6.1e-87 324.7 255 67.5
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 1.0e-86 323.9 256 66.4
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 1.0e-86 323.9 256 67.6
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.0e-86 323.9 256 67.6
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.0e-86 323.9 256 67.6
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 1.0e-86 323.9 256 66.4
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.8e-86 323.2 256 66.0
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.8e-86 323.2 256 66.0
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 2.3e-86 322.8 256 65.6
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.3e-86 322.8 256 65.6
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 2.3e-86 322.8 265 64.5
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 3.1e-86 322.4 256 66.0
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 4.0e-86 322.0 257 66.5
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 6.8e-86 321.2 256 66.4
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 6.8e-86 321.2 256 66.0
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 6.8e-86 321.2 256 66.0
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 8.9e-86 320.9 257 66.5
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 8.9e-86 320.9 257 66.5
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 1.2e-85 320.5 257 65.8
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 1.2e-85 320.5 257 65.8
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 1.2e-85 320.5 257 66.1
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 1.5e-85 320.1 256 66.0
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 1.5e-85 320.1 256 65.6
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 2.6e-85 319.3 256 65.2
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 3.4e-85 318.9 256 66.0
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 3.4e-85 318.9 265 63.8
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 3.4e-85 318.9 256 66.4
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 4.4e-85 318.5 256 65.2
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 4.4e-85 318.5 257 65.4
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 4.4e-85 318.5 256 66.0
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 5.8e-85 318.2 257 65.4
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 5.8e-85 318.2 256 65.2
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 5.8e-85 318.2 257 65.4
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 9.8e-85 317.4 256 65.6
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 9.8e-85 317.4 256 65.6
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 9.8e-85 317.4 256 67.2
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 1.3e-84 317.0 256 65.6
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 1.7e-84 316.6 256 66.8
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 1.7e-84 316.6 257 65.0
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 2.2e-84 316.2 256 65.2
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 2.9e-84 315.8 256 64.5
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 2.9e-84 315.8 256 65.2
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 2.9e-84 315.8 256 65.2
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 3.7e-84 315.5 257 65.0
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 3.7e-84 315.5 256 64.5
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 4.9e-84 315.1 256 65.2
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 6.4e-84 314.7 256 65.2
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 6.4e-84 314.7 256 65.2
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 6.4e-84 314.7 240 68.3
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 8.3e-84 314.3 256 64.5
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 8.3e-84 314.3 256 64.5
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 1.4e-83 313.5 256 64.8
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.2e-83 312.4 247 66.8
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 3.2e-83 312.4 247 66.8
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 7.0e-83 311.2 256 64.1
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 9.2e-83 310.8 256 64.8
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 1.2e-82 310.5 256 64.5
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.6e-82 310.1 256 63.3
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 6.6e-81 304.7 270 62.2
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 2.5e-80 302.8 339 52.8
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 1.6e-79 300.1 256 62.1
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 6.8e-78 294.7 255 60.4
unitig_32.g11112 Utricularia gibba HOM05D004589 ORTHO05D005848 1.3e-76 290.4 297 53.5
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.4e-75 287.0 265 57.7
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 2.4e-75 286.2 247 60.7
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 4.1e-75 285.4 269 57.6
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 6.0e-74 281.6 256 60.9
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 5.1e-73 278.5 244 61.9
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 4.4e-69 265.4 217 65.4
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 3.2e-67 259.2 236 61.4
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 2.4e-62 243.0 250 56.0
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 6.8e-62 241.5 199 63.8
Cpa.g.sc187.29 Carica papaya HOM05D004589 ORTHO05D005848 3.4e-61 239.2 156 76.9
SEGI_04045 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 1.1e-59 234.2 146 78.8
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.0e-57 227.6 247 52.2
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 1.0e-57 227.6 184 64.1
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 1.3e-57 227.3 184 63.6
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 5.1e-57 225.3 252 50.8
TPR.G38939 Trifolium pratense HOM05D004589 ORTHO05D005848 1.1e-56 224.2 155 74.2
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 1.9e-56 223.4 379 41.2
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.6e-55 219.2 251 48.2
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.6e-55 219.2 250 48.0
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.1e-50 203.4 260 43.1
Zm00001eb426000 Zea mays HOM05D004589 ORTHO05D005848 6.2e-47 191.8 118 83.1
Hma1.2p1_0167F.1_g073630 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 7.6e-45 184.9 124 75.8
SMO361G0808 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.1e-39 166.8 233 43.8
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 1.1e-30 137.9 138 53.6
TPR.G40835 Trifolium pratense HOM05D004589 ORTHO05D005848 1.3e-23 114.4 83 67.5
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 4.8e-23 112.5 82 69.5
RcHm_v2.0_Chr2g0096161 Rosa chinensis HOM05D004589 ORTHO05D005848 5.0e-12 75.9 47 68.1
C02p04820 Brassica napus HOM05D004589 ORTHO05D023960 1.0e-09 68.2 74 58.1
BolC2t06439H Brassica oleracea HOM05D004589 ORTHO05D023960 1.0e-09 68.2 74 58.1
A02p00800 Brassica napus HOM05D004589 ORTHO05D023960 1.8e-09 67.4 60 63.3
Cre07.g316100 Chlamydomonas reinhardtii HOM05D004589 ORTHO05D005848 1.3e-07 61.2 134 32.8


User provided reference genes

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