Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024759 Vanilla planifolia HOM05D008293 ORTHO05D010504 3.8e-260 901.0 458 100.0
Dinv14981 Davidia involucrata HOM05D008293 ORTHO05D010504 2.6e-147 526.2 443 60.0
CSS0000482 Camellia sinensis var. sinensis HOM05D008293 ORTHO05D010504 1.1e-142 510.8 431 61.5
TAR627G0720 Trochodendron aralioides HOM05D008293 ORTHO05D010504 2.3e-140 503.1 437 59.7
Aqoxy4G00368 Aquilegia oxysepala HOM05D008293 ORTHO05D010504 1.5e-139 500.4 435 60.5
GSVIVG01014211001 Vitis vinifera HOM05D008293 ORTHO05D010504 7.5e-139 498.0 437 60.9
PSO782G2569 Papaver somniferum HOM05D008293 ORTHO05D010504 2.2e-138 496.5 437 60.0
Sopen07g030780 Solanum pennellii HOM05D008293 ORTHO05D010504 2.2e-138 496.5 440 59.1
Actinidia18798 Actinidia chinensis HOM05D008293 ORTHO05D010504 3.7e-138 495.7 435 59.3
PGSC0003DMG400012428 Solanum tuberosum HOM05D008293 ORTHO05D010504 3.7e-138 495.7 440 58.9
Rhsim04G0025400 Rhododendron simsii HOM05D008293 ORTHO05D010504 3.1e-137 492.7 436 58.7
Atru.chr2.2164 Acer truncatum HOM05D008293 ORTHO05D010504 5.4e-137 491.9 434 59.7
MD03G1241800 Malus domestica HOM05D008293 ORTHO05D010504 3.5e-136 489.2 431 60.6
Hma1.2p1_2505F.1_g323420 Hydrangea macrophylla HOM05D008293 ORTHO05D010504 7.8e-136 488.0 433 59.6
Thecc.07G109900 Theobroma cacao HOM05D008293 ORTHO05D010504 2.3e-135 486.5 431 59.2
COL.COLO4_24863 Corchorus olitorius HOM05D008293 ORTHO05D010504 6.6e-135 485.0 450 56.9
Prupe.4G167100 Prunus persica HOM05D008293 ORTHO05D010504 8.6e-135 484.6 434 59.7
CAN.G162.9 Capsicum annuum HOM05D008293 ORTHO05D010504 4.7e-133 478.8 439 57.9
Gohir.A13G148900 Gossypium hirsutum HOM05D008293 ORTHO05D010504 1.0e-132 477.6 437 56.3
Nitab4.5_0000246g0170 Nicotiana tabacum HOM05D008293 ORTHO05D010504 1.0e-132 477.6 436 58.3
Nitab4.5_0001145g0060 Nicotiana tabacum HOM05D008293 ORTHO05D010504 3.0e-132 476.1 436 58.0
Gohir.D13G153400 Gossypium hirsutum HOM05D008293 ORTHO05D010504 2.6e-131 473.0 431 56.8
PGR083G2613 Punica granatum HOM05D008293 ORTHO05D010504 4.4e-131 472.2 448 56.7
AagrBONN_evm.TU.Sc2ySwM_344.4932 Anthoceros agrestis HOM05D008293 ORTHO05D010504 7.5e-131 471.5 430 57.2
Gorai.013G173300 Gossypium raimondii HOM05D008293 ORTHO05D010504 7.5e-131 471.5 433 56.8
QL08p026533 Quercus lobata HOM05D008293 ORTHO05D010504 1.3e-130 470.7 436 58.5
Peaxi162Scf00069g02232 Petunia axillaris HOM05D008293 ORTHO05D010504 8.3e-130 468.0 442 56.8
Migut.M00735 Erythranthe guttata HOM05D008293 ORTHO05D010504 3.5e-128 462.6 436 58.3
Pp3c22_22050 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.3e-127 460.7 431 56.1
Haze_09337 Corylus avellana HOM05D008293 ORTHO05D010504 4.3e-126 455.7 447 55.9
CANSAT35G0405 Cannabis sativa HOM05D008293 ORTHO05D010504 2.8e-125 453.0 435 57.2
Pp3c19_10600 Physcomitrium patens HOM05D008293 ORTHO05D010504 1.2e-123 447.6 431 55.2
SMO118G0404 Selaginella moellendorffii HOM05D008293 ORTHO05D010504 1.5e-123 447.2 434 55.3
Nn1g09105 Nelumbo nucifera HOM05D008293 ORTHO05D010504 2.2e-122 443.4 436 56.4
Mapoly0032s0102 Marchantia polymorpha HOM05D008293 ORTHO05D010504 4.1e-121 439.1 433 54.5
Ciclev10020583m.g Citrus clementina HOM05D008293 ORTHO05D010504 6.6e-119 431.8 389 57.8
Cc05_g11210 Coffea canephora HOM05D008293 ORTHO05D010504 7.5e-115 418.3 383 57.2
Solyc07g062543.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 4.1e-113 412.5 352 60.2
SGA_v2.0_scaffold55G19705 Striga asiatica HOM05D008293 ORTHO05D010504 1.6e-109 400.6 436 53.4
PRCOL_00003950 Prasinoderma coloniale HOM05D008293 ORTHO05D010504 4.7e-101 372.5 437 50.8
CBR_g40882 Chara braunii HOM05D008293 ORTHO05D010504 5.6e-94 349.0 433 47.3
Ciclev10023335m.g Citrus clementina HOM05D008293 ORTHO05D010504 5.8e-91 339.0 424 46.7
RcHm_v2.0_Chr5g0030831 Rosa chinensis HOM05D008293 ORTHO05D010504 6.7e-87 325.5 347 51.9
SEGI_20639 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.9e-86 323.9 349 49.6
Lj1A831T70 Lonicera japonica HOM05D008293 ORTHO05D010504 1.0e-79 301.6 255 58.8
Cpa.g.sc97.100 Carica papaya HOM05D008293 ORTHO05D010504 9.0e-68 261.9 202 62.4
RcHm_v2.0_Chr5g0031211 Rosa chinensis HOM05D008293 ORTHO05D010504 7.6e-67 258.8 341 45.7
RcHm_v2.0_Chr7g0194341 Rosa chinensis HOM05D008293 ORTHO05D010504 9.1e-52 208.8 239 51.5
Ca_29004_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 3.9e-47 193.4 252 47.6
Atru.chr2.2165 Acer truncatum HOM05D003516 ORTHO05D004068 3.3e-46 190.3 186 54.8
RcHm_v2.0_Chr5g0031411 Rosa chinensis HOM05D008293 ORTHO05D010504 1.9e-41 174.5 222 46.4
Lj1P831T51 Lonicera japonica HOM05D008293 ORTHO05D010504 6.7e-39 166.0 140 60.7
AagrBONN_evm.TU.Sc2ySwM_344.893 Anthoceros agrestis HOM05D008293 ORTHO05D010504 1.3e-37 161.8 133 61.7
Solyc07g062547.1 Solanum lycopersicum HOM05D008293 ORTHO05D010504 1.0e-34 152.1 139 59.7
Cfa019577 Carpinus fangiana HOM05D008293 ORTHO05D010504 3.8e-34 150.2 139 57.6
MD10G1199100 Malus domestica HOM05D008293 ORTHO05D010504 6.1e-32 142.9 171 45.0
SEGI_30761 Sequoiadendron giganteum HOM05D008293 ORTHO05D010504 1.7e-29 134.8 148 46.6
Actinidia35215 Actinidia chinensis HOM05D008293 ORTHO05D010504 6.6e-18 96.3 273 30.4
Ca_29048_v3 Cicer arietinum L. HOM05D008293 ORTHO05D010504 4.7e-16 90.1 101 45.5
SEGI_40959 Sequoiadendron giganteum HOM05D008293 ORTHO05D386060 3.9e-10 70.5 62 58.1


User provided reference genes

Program Settings