Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 1.7e-177 625.9 319 100.0
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.3e-102 377.1 257 73.2
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 8.7e-102 374.4 300 66.3
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 9.6e-101 370.9 297 66.0
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 2.8e-100 369.4 300 64.7
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 8.1e-100 367.9 313 63.6
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 2.4e-99 366.3 286 66.1
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 4.0e-99 365.5 294 64.6
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 5.3e-99 365.2 300 66.3
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 6.9e-99 364.8 293 66.6
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.5e-98 363.6 293 65.2
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.5e-98 363.6 293 65.2
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.5e-98 363.6 293 65.2
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 3.4e-98 362.5 294 65.6
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 4.5e-98 362.1 291 65.3
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 4.5e-98 362.1 224 79.0
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 5.8e-98 361.7 262 69.5
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 5.8e-98 361.7 264 69.7
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 7.6e-98 361.3 271 69.0
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 7.6e-98 361.3 269 69.9
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.0e-97 360.9 272 68.4
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.0e-97 360.9 294 65.0
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.0e-97 360.9 294 64.3
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 1.3e-97 360.5 232 75.9
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 1.7e-97 360.1 298 66.4
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 2.2e-97 359.8 294 65.0
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.9e-97 359.4 269 69.1
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 3.8e-97 359.0 229 76.9
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 3.8e-97 359.0 246 71.5
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 4.9e-97 358.6 301 63.8
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 4.9e-97 358.6 266 69.5
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 6.5e-97 358.2 294 65.0
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 6.5e-97 358.2 263 68.8
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 8.4e-97 357.8 275 66.5
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 1.1e-96 357.5 305 61.3
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 1.1e-96 357.5 258 69.4
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 1.4e-96 357.1 269 68.8
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 1.4e-96 357.1 264 68.9
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 1.9e-96 356.7 291 66.0
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 1.9e-96 356.7 234 73.9
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.9e-96 356.7 299 63.5
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 3.2e-96 355.9 301 64.5
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 4.2e-96 355.5 232 75.4
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 4.2e-96 355.5 263 67.7
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 5.5e-96 355.1 288 63.9
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 7.1e-96 354.8 274 66.8
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 7.1e-96 354.8 310 61.0
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 9.3e-96 354.4 305 61.0
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 9.3e-96 354.4 224 76.8
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 1.2e-95 354.0 295 63.4
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 1.2e-95 354.0 242 71.5
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 1.2e-95 354.0 274 68.2
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.2e-95 354.0 265 68.3
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 1.2e-95 354.0 265 68.3
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 1.6e-95 353.6 317 59.6
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 2.7e-95 352.8 261 70.1
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.7e-95 352.8 274 65.0
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 3.5e-95 352.4 265 69.1
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 4.6e-95 352.1 292 65.1
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 4.6e-95 352.1 289 63.0
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 4.6e-95 352.1 258 68.2
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 6.0e-95 351.7 289 64.7
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 6.0e-95 351.7 319 59.2
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 6.0e-95 351.7 270 67.4
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 6.0e-95 351.7 256 71.1
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 7.9e-95 351.3 245 69.0
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 7.9e-95 351.3 297 62.0
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 1.3e-94 350.5 297 64.3
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 2.3e-94 349.7 292 63.7
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.3e-94 349.7 229 74.2
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 3.0e-94 349.4 303 60.7
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 3.0e-94 349.4 327 59.3
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 3.9e-94 349.0 291 64.3
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 6.7e-94 348.2 264 68.6
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 1.1e-93 347.4 291 64.3
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 1.5e-93 347.1 296 64.2
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 1.9e-93 346.7 298 65.1
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 5.7e-93 345.1 229 72.9
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 9.6e-93 344.4 229 72.9
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.3e-92 344.0 268 66.0
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.6e-92 343.6 236 72.5
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 8.2e-92 341.3 215 75.3
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 8.2e-92 341.3 231 71.9
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 2.4e-91 339.7 296 61.5
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.9e-88 330.1 286 60.1
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 4.2e-88 328.9 274 64.2
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 1.2e-87 327.4 266 64.7
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 4.3e-85 318.9 237 67.5
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 1.6e-84 317.0 270 62.2
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 2.0e-82 310.1 230 67.0
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 1.4e-80 303.9 219 67.6
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 5.5e-80 302.0 281 58.0
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 1.5e-77 293.9 255 60.0
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 5.7e-77 292.0 241 62.7
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 4.1e-75 285.8 198 71.2
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 7.2e-72 275.0 217 65.4
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 3.9e-70 269.2 181 71.8
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 8.8e-70 268.1 222 64.0
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 1.6e-66 257.3 265 54.0
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 8.2e-60 235.0 215 57.7
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 2.3e-54 216.9 250 49.2
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.6e-50 204.1 298 44.6
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 1.7e-49 200.7 187 60.4
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 6.1e-47 192.2 200 55.5
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.7e-44 183.0 134 68.7
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 3.6e-39 166.4 112 70.5
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 2.3e-38 163.7 112 69.6
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 1.7e-36 157.5 108 69.4
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 2.0e-34 150.6 224 42.0
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 9.2e-27 125.2 220 38.6
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 8.1e-23 112.1 71 77.5
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 2.3e-22 110.5 125 48.8
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.4e-19 101.3 220 35.5
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.5e-13 81.3 64 65.6
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 1.2e-10 71.6 190 34.2
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 2.7e-10 70.5 205 29.3
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 1.0e-09 68.6 188 30.9
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 2.5e-08 63.9 46 71.7
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 3.3e-08 63.5 33 78.8
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.6e-07 61.2 180 31.1
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 3.6e-07 60.1 187 29.4
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 1.4e-06 58.2 179 29.1
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 1.4e-06 58.2 188 28.7
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.8e-06 57.8 182 29.1
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.8e-06 57.8 179 29.1
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 2.4e-06 57.4 184 28.3
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 2.4e-06 57.4 190 27.4
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 4.0e-06 56.6 189 27.5
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 4.0e-06 56.6 179 30.2
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 5.2e-06 56.2 190 27.9


User provided reference genes

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