Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 0.0e+00 1609.7 833 100.0
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 0.0e+00 1464.1 833 92.4
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 2.0e-230 803.1 801 54.9
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 1.7e-221 773.5 778 54.4
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.4e-215 753.8 802 52.4
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 6.8e-215 751.5 801 53.1
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 8.9e-215 751.1 864 49.5
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.4e-212 743.8 805 51.2
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 7.1e-212 741.5 811 51.7
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 3.5e-211 739.2 795 51.6
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 3.5e-211 739.2 797 51.4
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 4.6e-211 738.8 798 51.5
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 7.8e-211 738.0 799 52.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.8e-211 738.0 778 52.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.3e-210 737.3 828 50.6
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.6e-210 734.9 777 52.8
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.1e-209 734.2 802 50.9
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.6e-208 730.3 802 50.7
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.1e-208 729.9 792 52.0
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 6.2e-208 728.4 828 50.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.1e-207 727.6 808 51.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.8e-207 726.9 796 51.1
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 3.1e-207 726.1 796 51.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 6.9e-207 724.9 784 51.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 3.4e-206 722.6 801 51.2
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.8e-205 719.2 814 50.6
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.1e-204 717.6 801 50.9
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 5.4e-204 715.3 791 52.0
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 9.3e-204 714.5 780 50.1
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.2e-203 714.1 842 49.5
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 4.6e-203 712.2 796 51.3
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 6.0e-203 711.8 789 50.6
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 6.6e-202 708.4 767 50.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 5.6e-201 705.3 848 49.2
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 7.3e-201 704.9 765 51.1
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.1e-200 703.4 752 52.0
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 4.0e-199 699.1 798 50.0
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 6.9e-199 698.4 779 50.2
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 9.0e-199 698.0 783 49.7
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.2e-198 697.6 795 48.9
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 4.5e-198 695.7 825 49.6
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 5.8e-198 695.3 812 48.9
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.3e-197 694.1 794 49.9
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.4e-196 690.6 807 49.4
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.9e-196 690.3 778 50.5
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.6e-195 687.2 778 50.1
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.0e-194 682.9 778 50.1
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 4.3e-193 679.1 757 49.8
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.1e-191 674.5 767 49.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.1e-191 674.5 753 50.7
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.4e-191 673.3 793 48.0
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 3.1e-191 672.9 723 52.6
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 6.9e-191 671.8 854 47.0
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 9.0e-191 671.4 795 49.6
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 5.8e-190 668.7 765 49.8
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 3.8e-189 666.0 791 49.4
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.4e-188 664.1 786 47.5
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.9e-188 663.7 799 49.3
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.9e-188 663.7 754 51.1
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 3.2e-188 662.9 801 47.8
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-185 654.4 793 48.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.5e-185 653.3 772 49.0
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 4.3e-185 652.5 755 49.9
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 4.3e-185 652.5 774 47.9
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.8e-184 649.8 763 49.4
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.0e-182 643.7 814 46.7
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 2.0e-182 643.7 837 45.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.0e-181 641.3 819 46.8
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.3e-181 641.0 766 47.8
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.7e-181 640.6 796 47.5
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 3.8e-181 639.4 791 47.3
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 4.9e-181 639.0 796 47.4
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 4.9e-181 639.0 806 48.6
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 8.4e-181 638.3 795 46.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.1e-180 637.9 819 46.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.5e-180 636.7 782 46.9
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.5e-180 636.7 811 46.9
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 4.2e-180 636.0 836 46.1
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.6e-179 634.0 797 46.8
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 1.6e-179 634.0 803 46.1
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 4.6e-179 632.5 791 47.2
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 7.4e-177 625.2 851 44.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.6e-176 624.0 762 47.9
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-172 611.3 779 46.1
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 6.5e-165 585.5 803 44.5
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.9e-164 583.9 622 52.3
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 3.3e-161 573.2 728 46.2
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.9e-154 549.7 758 44.5
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.7e-141 507.7 456 58.6
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 2.5e-140 503.8 515 54.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.7e-136 491.1 778 41.3
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 3.1e-135 486.9 582 47.8
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.5e-134 483.4 496 53.6
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 8.6e-133 478.8 596 48.8
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 8.6e-133 478.8 592 48.8
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 2.0e-129 467.6 478 52.9
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.8e-127 461.1 573 46.8
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.8e-127 461.1 478 52.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 3.5e-126 456.8 445 55.1
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.7e-101 374.8 817 32.9
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 2.5e-100 370.9 635 38.7
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.3e-93 347.8 868 31.2
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.5e-73 282.0 793 29.4
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 2.5e-68 264.6 396 39.1
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.8e-64 250.8 284 48.9
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-63 248.4 241 54.8
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 8.7e-61 239.6 623 30.0
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.5e-57 228.8 214 55.1
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 5.9e-57 226.9 210 55.7
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.2e-51 208.4 209 53.6
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.8e-51 208.0 205 53.7
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 7.7e-49 199.9 849 25.6
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 3.8e-48 197.6 217 48.8
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 7.7e-17 93.6 135 41.5
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.8e-13 82.4 140 38.6
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.2e-11 75.5 163 36.8
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 5.4e-10 70.9 94 46.8
Ciclev10018671m.g Citrus clementina HOM05D000716 ORTHO05D004822 4.5e-09 67.8 221 24.4
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.2e-06 59.7 119 37.0
Duzib138G0425 Durio zibethinus HOM05D000716 ORTHO05D004822 2.8e-06 58.5 196 23.5
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 3.6e-06 58.2 67 44.8


User provided reference genes

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